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Lag0005314 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005314
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr6:14120541..14121098
RNA-Seq ExpressionLag0005314
SyntenyLag0005314
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]1.2e-2283.1Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A   +EAEY A CEAAKEAVWLRKFLTDLEVVPNM+LPITLY DNSGAV NSKEP  HKRGKHI RKYHLI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-2283.1Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A   +EAEY A CEAAKEAVWLRKFL DLEVVPNMNLPITLY DNSGAV NSKEP  HKRGKHI RKYHLI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-2283.1Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A   +EAEY A CEAAKEAVWLRKFL DLEVVPNMNLPITLY DNSGAV NSKEP  HKRGKHI RKYHLI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
KAA0058279.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-2283.1Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A   +EAEY A CEAAKEAVWLRKFL DLEVVPNMNLPITLY DNSGAV NSKEP  HKRGKHI RKYHLI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
KAA0059678.1 gag/pol protein [Cucumis melo var. makuwa]9.6e-2381.69Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A   +EAEY A C+AAKEAVWLRKFL DLEVVPN NLPITLY DNSGAV NSKEPC HKRGKHI RKYHLI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
TrEMBL top hitse value%identityAlignment
A0A5A7T336 Retrovirus-related pol polyprotein from transposon tnt 1-941.0e-2280.28Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A  ++EAEY A CEAAKEAVWLRKFL DLEVVPNMNLPI LY DNSGA+ NSKEPC HKRGKHI RKY+LI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
A0A5A7TZD0 Gag/pol protein1.0e-2283.1Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A   +EAEY A CEAAKEAVWLRKFL DLEVVPNMNLPITLY DNSGAV NSKEP  HKRGKHI RKYHLI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
A0A5A7UWW4 Gag/pol protein4.6e-2381.69Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A   +EAEY A C+AAKEAVWLRKFL DLEVVPN NLPITLY DNSGAV NSKEPC HKRGKHI RKYHLI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
A0A5D3C8F4 Retrovirus-related pol polyprotein from transposon tnt 1-941.0e-2281.69Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A   +EAEY A CEA KEAVWLRKFL DLEVVPNMNLPITLY DNSGAV NSKEPC HKRGKHI RKY LI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
E2GK51 Gag/pol protein (Fragment)6.0e-2383.1Show/hide
Query:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
        A   +EAEY A CEAAKEAVWLRKFLTDLEVVPNM+LPITLY DNSGAV NSKEP  HKRGKHI RKYHLI
Subjt:  AKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI
SwissProt top hitse value%identityAlignment
P04146 Copia protein1.2e-0743.06Show/hide
Query:  NAAAKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYH
        N+ A  + EAEY A  EA +EA+WL+  LT + +   +  PI +Y DN G ++ +  P  HKR KHI  KYH
Subjt:  NAAAKKNLEAEY-ADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYH
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCAAAGTTCTCAAAAAGCTATTTAGGCCAAAGGTTGTTGAATCTTCAGCACCAGCAAGCAAAATGCAAGATAAAGAAATAGTTGTTTTAGGTGAAGGTGGAAA
ATCTAAGGCCATGAGAAGGAGTCCTAGAAACAAGGGAAAGGGAAAGCAAGTGGTGGAACAAGAAGAACTTCATGAAGAAGTAATTGTGACTCAAGTTCAAGAGGAAGAAG
TTGAGGAAGAAATTGCGCCTCCCCCAAAAAGTCCTCCAACAAGGAAAAAGAGCCTAAAGAAAAAGGGAAAAGAGCCAATGCTGGAAATTGATGAGAGCCCCATGGAGAAG
TTCGTCAATGCTGCCGCTAAGAAAAATTTGGAGGCTGAGTATGCTGATTGTGAAGCAGCTAAGGAAGCGGTTTGGCTAAGGAAGTTCTTGACAGATTTGGAAGTTGTTCC
AAATATGAACTTGCCCATAACATTATACTATGACAACAGTGGGGCTGTAACCAATTCTAAAGAACCTTGCAAGCACAAACGAGGAAAACACATCGTGAGGAAGTATCACC
TGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCAAAGTTCTCAAAAAGCTATTTAGGCCAAAGGTTGTTGAATCTTCAGCACCAGCAAGCAAAATGCAAGATAAAGAAATAGTTGTTTTAGGTGAAGGTGGAAA
ATCTAAGGCCATGAGAAGGAGTCCTAGAAACAAGGGAAAGGGAAAGCAAGTGGTGGAACAAGAAGAACTTCATGAAGAAGTAATTGTGACTCAAGTTCAAGAGGAAGAAG
TTGAGGAAGAAATTGCGCCTCCCCCAAAAAGTCCTCCAACAAGGAAAAAGAGCCTAAAGAAAAAGGGAAAAGAGCCAATGCTGGAAATTGATGAGAGCCCCATGGAGAAG
TTCGTCAATGCTGCCGCTAAGAAAAATTTGGAGGCTGAGTATGCTGATTGTGAAGCAGCTAAGGAAGCGGTTTGGCTAAGGAAGTTCTTGACAGATTTGGAAGTTGTTCC
AAATATGAACTTGCCCATAACATTATACTATGACAACAGTGGGGCTGTAACCAATTCTAAAGAACCTTGCAAGCACAAACGAGGAAAACACATCGTGAGGAAGTATCACC
TGATATAG
Protein sequenceShow/hide protein sequence
MAPKVLKKLFRPKVVESSAPASKMQDKEIVVLGEGGKSKAMRRSPRNKGKGKQVVEQEELHEEVIVTQVQEEEVEEEIAPPPKSPPTRKKSLKKKGKEPMLEIDESPMEK
FVNAAAKKNLEAEYADCEAAKEAVWLRKFLTDLEVVPNMNLPITLYYDNSGAVTNSKEPCKHKRGKHIVRKYHLI