; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005326 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005326
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNucleic acid-binding, OB-fold-like protein
Genome locationchr6:14347623..14350282
RNA-Seq ExpressionLag0005326
SyntenyLag0005326
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142984.1 uncharacterized protein At4g28440 [Cucumis sativus]6.1e-6795.62Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGAT+ LRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

XP_022131585.1 uncharacterized protein At4g28440-like [Momordica charantia]3.6e-6795.62Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGAT+ILRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPASFTVKEDNNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

XP_022951207.1 uncharacterized protein At4g28440-like [Cucurbita moschata]2.1e-6796.35Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGAT+ILRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

XP_022961781.1 uncharacterized protein At4g28440-like [Cucurbita moschata]1.2e-6594.16Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTL VKVVN KMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGAT+ LRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

XP_038883981.1 uncharacterized protein At4g28440 [Benincasa hispida]8.0e-6794.89Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTK+DQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGAT+ LRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

TrEMBL top hitse value%identityAlignment
A0A1S3BA24 uncharacterized protein At4g28440 isoform X13.0e-6795.62Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGAT+ LRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

A0A5A7V0K6 Nucleic acid-binding protein3.0e-6795.62Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGAT+ LRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

A0A6J1BQ40 uncharacterized protein At4g28440-like1.7e-6795.62Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGAT+ILRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPASFTVKEDNNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

A0A6J1GH14 uncharacterized protein At4g28440-like1.0e-6796.35Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGAT+ILRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

A0A6J1KS21 uncharacterized protein At4g28440-like1.0e-6796.35Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGAT+ILRNAKIDMFKG MRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSL+E+ELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284402.0e-4468.94Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRLAV
        RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDETG I+FTARNDQVDLMK GATVILRN++IDMFKG MRL V
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRLAV

Query:  DRWGRVEVTEPASFTVKEDNNLSLVEFELVNV
        D+WGR+E T  ASFTVKEDNNLSLVE+EL+NV
Subjt:  DRWGRVEVTEPASFTVKEDNNLSLVEFELVNV

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein4.4e-5577.37Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ V LRNAKIDM+KG M
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFM

Query:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLVEFELVNV
        RLAVDRWGRVEV  EP   TVK+DNNLSL+E+ELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLVEFELVNV

AT1G10590.2 Nucleic acid-binding, OB-fold-like protein4.4e-5577.37Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ V LRNAKIDM+KG M
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFM

Query:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLVEFELVNV
        RLAVDRWGRVEV  EP   TVK+DNNLSL+E+ELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLVEFELVNV

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein4.4e-5577.37Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ V LRNAKIDM+KG M
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFM

Query:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLVEFELVNV
        RLAVDRWGRVEV  EP   TVK+DNNLSL+E+ELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLVEFELVNV

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein3.5e-6081.02Show/hide
Query:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMR
        MA+S K GL+KP FTKVDQLRPGTSGH + VK+V+TKMVLQKGR DGPQARQ+RI+EC+VGDETG+I+FTARNDQVDLMKEG+TV LRNAKIDM+KG MR
Subjt:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMR

Query:  LAVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVE
        LAVD+WGRVEVTEPASF VKED N+SL+E+ELVNVVE
Subjt:  LAVDRWGRVEVTEPASFTVKEDNNLSLVEFELVNVVE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein6.1e-4975.38Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRLAVDRWGR
        +KPVF KVDQL+PGTSGHTLTVKVV+   V QK G       R  RI+ECLVGDET  I+FTARNDQV+LMK GATV LRNAKIDMFKG MRLAVD+WGR
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRLAVDRWGR

Query:  VEVTEPASFTVKEDNNLSLVEFELVNVVEE
        +E TEPA  TVKEDNNLSLVE+ELVNVVEE
Subjt:  VEVTEPASFTVKEDNNLSLVEFELVNVVEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATCAAAACCTGGACTGAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGGCATACTCTTACAGTCAAGGTTGTGAATACTAAGAT
GGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCTTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATC
AAGTGGACTTGATGAAAGAAGGTGCTACCGTGATACTGCGCAATGCTAAGATAGACATGTTTAAAGGATTTATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTT
ACTGAGCCTGCGAGTTTTACTGTTAAGGAGGATAACAATCTTTCACTCGTTGAATTTGAACTTGTGAATGTCGTGGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAATCAAAACCTGGACTGAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGGCATACTCTTACAGTCAAGGTTGTGAATACTAAGAT
GGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCTTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATC
AAGTGGACTTGATGAAAGAAGGTGCTACCGTGATACTGCGCAATGCTAAGATAGACATGTTTAAAGGATTTATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTT
ACTGAGCCTGCGAGTTTTACTGTTAAGGAGGATAACAATCTTTCACTCGTTGAATTTGAACTTGTGAATGTCGTGGAAGAGTGA
Protein sequenceShow/hide protein sequence
MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATVILRNAKIDMFKGFMRLAVDRWGRVEV
TEPASFTVKEDNNLSLVEFELVNVVEE