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Lag0005348 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005348
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDDE Tnp4 domain-containing protein
Genome locationchr6:14845481..14845876
RNA-Seq ExpressionLag0005348
SyntenyLag0005348
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068176.1 putative nuclease HARBI1 isoform X1 [Cucumis melo var. makuwa]6.3e-3761.07Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MP FL+P+RG+ YHLRD R+  H+PRGREE+FNYRHSSLRNVIERCFGVLKARFPILKQMPPYP  TQK++ I C  +HN+I+L+D  D+LF++++ ELM
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA
        I+E+ +    N L    IE +VS+  L+ MA
Subjt:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA

KAG5543458.1 hypothetical protein RHGRI_016254 [Rhododendron griersonianum]1.7e-3455.73Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MP FLSPYRGE YHL + R  G +P+  E+ FN+RHSSLRNVIERCFGVLKARFPILKQMPPY   TQK++P ACF +HN+I++HD +D+LF EY++E M
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA
        ++ +      ++ S+ P+E ++++ QL+ M+
Subjt:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA

KAG5543460.1 hypothetical protein RHGRI_016254 [Rhododendron griersonianum]1.7e-3455.73Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MP FLSPYRGE YHL + R  G +P+  E+ FN+RHSSLRNVIERCFGVLKARFPILKQMPPY   TQK++P ACF +HN+I++HD +D+LF EY++E M
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA
        ++ +      ++ S+ P+E ++++ QL+ M+
Subjt:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA

TYK06269.1 protein ALP1-like [Cucumis melo var. makuwa]9.7e-3861.83Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MP FL+P+RG+ YHLRD R+  H+PRGREE+FNYRHSSLRNVIERCFGVLKARFPILKQMPPYP  TQK++PI C  +HN+I+L+D  D+LF+ ++ ELM
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA
        I+E+ +    N L    IE +VS+  L+ MA
Subjt:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA

TYK21096.1 protein ALP1-like [Cucumis melo var. makuwa]6.3e-3761.07Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MP FL+P+RG+ YHLRD R+  H+PRGREE+FNYRHSSLRNVIERCFGVLKARFPILKQMPPYP  TQK++ I C  +HN+I+L+D  D+LF++++ ELM
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA
        I+E+ +    N L    IE +VS+  L+ MA
Subjt:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA

TrEMBL top hitse value%identityAlignment
A0A1R3GLP1 Harbinger transposase-derived nuclease3.9e-3257.25Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MP FLSPYRGE YHLRD R  G QP G EE+FN+RHS LRN IERCFGVLKARFPILK MPPY +  Q+++ IAC  +HNFI+ H   D +F E+ R+ +
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA
        II+ED        S+  +E NV+ +QL+ MA
Subjt:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA

A0A1S4E0U9 uncharacterized protein LOC1034960414.1e-3468.27Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MPRFL+P++G  YHLRD R+  H PRGR E+FNYRHSSLRNVIERCFGVLKARFPILKQMPPYP  T K++ IAC  IHN+I+L+D  D+LF++++ ELM
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEE
        I+E+
Subjt:  IIEE

A0A5A7VNL5 Putative nuclease HARBI1 isoform X13.1e-3761.07Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MP FL+P+RG+ YHLRD R+  H+PRGREE+FNYRHSSLRNVIERCFGVLKARFPILKQMPPYP  TQK++ I C  +HN+I+L+D  D+LF++++ ELM
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA
        I+E+ +    N L    IE +VS+  L+ MA
Subjt:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA

A0A5D3C7F6 Protein ALP1-like4.7e-3861.83Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MP FL+P+RG+ YHLRD R+  H+PRGREE+FNYRHSSLRNVIERCFGVLKARFPILKQMPPYP  TQK++PI C  +HN+I+L+D  D+LF+ ++ ELM
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA
        I+E+ +    N L    IE +VS+  L+ MA
Subjt:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA

A0A5D3DC11 Protein ALP1-like3.1e-3761.07Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        MP FL+P+RG+ YHLRD R+  H+PRGREE+FNYRHSSLRNVIERCFGVLKARFPILKQMPPYP  TQK++ I C  +HN+I+L+D  D+LF++++ ELM
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM

Query:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA
        I+E+ +    N L    IE +VS+  L+ MA
Subjt:  IIEEDNMQHENDLSKTPIEENVSQNQLKHMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10890.1 unknown protein4.0e-0546.3Show/hide
Query:  FLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPIL
        +L P+R  +YHL      G  P   +ELFN +H  LR+VI+R FGV KA++ IL
Subjt:  FLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPIL

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)3.8e-1635.34Show/hide
Query:  FLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTREL----
        FL+P+RG  YHL++       P    ELFN RH SLRNVIER FG+ K+RF I K  PP+    Q  + + C A+HNF++     DE  +++  E+    
Subjt:  FLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTREL----

Query:  -MIIEEDNMQHENDL-SKTPIEENVSQNQLKHM
         ++  E N  + N++ ++ P+E      +  +M
Subjt:  -MIIEEDNMQHENDL-SKTPIEENVSQNQLKHM

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)6.1e-1438Show/hide
Query:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM
        +P F++PY G   + R+           +E+FN RH  L   I R FG LK RFPIL   PPYP  TQ  + IA  A+HN+++L    D +F  +  E +
Subjt:  MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAGATTTCTATCACCTTATCGTGGAGAAATATATCATTTGCGTGATTCTAGAGACGATGGACATCAACCACGAGGACGAGAAGAGTTATTCAATTATCGACACTC
ATCACTTCGCAATGTGATTGAGAGATGCTTTGGAGTTTTAAAGGCTCGATTTCCTATTTTAAAGCAAATGCCTCCATATCCTACATGCACACAAAAACATATGCCGATAG
CATGTTTTGCAATTCATAATTTTATCAAATTGCATGATAGCCATGATGAACTTTTTAGTGAATATACTCGTGAATTGATGATTATTGAAGAAGACAATATGCAACATGAA
AACGACCTTTCAAAAACCCCTATTGAGGAAAATGTGAGCCAAAATCAATTGAAGCATATGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAGATTTCTATCACCTTATCGTGGAGAAATATATCATTTGCGTGATTCTAGAGACGATGGACATCAACCACGAGGACGAGAAGAGTTATTCAATTATCGACACTC
ATCACTTCGCAATGTGATTGAGAGATGCTTTGGAGTTTTAAAGGCTCGATTTCCTATTTTAAAGCAAATGCCTCCATATCCTACATGCACACAAAAACATATGCCGATAG
CATGTTTTGCAATTCATAATTTTATCAAATTGCATGATAGCCATGATGAACTTTTTAGTGAATATACTCGTGAATTGATGATTATTGAAGAAGACAATATGCAACATGAA
AACGACCTTTCAAAAACCCCTATTGAGGAAAATGTGAGCCAAAATCAATTGAAGCATATGGCTTGA
Protein sequenceShow/hide protein sequence
MPRFLSPYRGEIYHLRDSRDDGHQPRGREELFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPTCTQKHMPIACFAIHNFIKLHDSHDELFSEYTRELMIIEEDNMQHE
NDLSKTPIEENVSQNQLKHMA