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Lag0005364 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005364
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr6:15370418..15370738
RNA-Seq ExpressionLag0005364
SyntenyLag0005364
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155341.1 uncharacterized protein LOC111022474 [Momordica charantia]4.9e-3265Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
        E Q IRDFKR+GPP F+  SE P A E W+  LEA++ Y+ C D  KVRGA+FMLR EA NWW+SVAAAEDHANVP++W RFKDLLY+YYFP   R  KR
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
XP_022155925.1 uncharacterized protein LOC111022925 [Momordica charantia]3.8e-3266Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
        E Q IRDFKR+GPP F+  SE P AAE W+  LEA++ Y+ C D  KVRGAVFML+ EA NWW+SVAAAEDHANVP++W RFKDLLY+YYFP   R  KR
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]6.5e-3265.35Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
        E Q IRDFK +GPP F+  SE P AAE W+  LEA++ Y+ C D  KVRGAVFMLR EA NWW+SVAAAEDHANVP++W RFKDLLY+YYFP  +R  KR
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR

Query:  L
        +
Subjt:  L
XP_022158637.1 uncharacterized protein LOC111025088 [Momordica charantia]6.5e-3262.63Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTK
        E+Q I+DFKRYGPP+FD  SE   AAE W+  LEA++ Y+ C+D+ KV+G VFMLR EA NWW S+A AEDHANVP+ W RFKDLLYDYY+P   + TK
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTK
XP_022158645.1 uncharacterized protein LOC111025102 [Momordica charantia]6.5e-3266Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
        E Q IRDFKR+GPP F+  SE P AAE W+  LEA++ Y+ C D  KVRGAVFML  EA NWW+SVAAAEDHANVP++W RFKDLLY+YYFP   R  KR
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
TrEMBL top hitse value%identityAlignment
A0A6J1DNV8 uncharacterized protein LOC1110229251.8e-3266Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
        E Q IRDFKR+GPP F+  SE P AAE W+  LEA++ Y+ C D  KVRGAVFML+ EA NWW+SVAAAEDHANVP++W RFKDLLY+YYFP   R  KR
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
A0A6J1DRF5 uncharacterized protein LOC1110224742.4e-3265Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
        E Q IRDFKR+GPP F+  SE P A E W+  LEA++ Y+ C D  KVRGA+FMLR EA NWW+SVAAAEDHANVP++W RFKDLLY+YYFP   R  KR
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
A0A6J1DWE6 uncharacterized protein LOC1110251023.1e-3266Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
        E Q IRDFKR+GPP F+  SE P AAE W+  LEA++ Y+ C D  KVRGAVFML  EA NWW+SVAAAEDHANVP++W RFKDLLY+YYFP   R  KR
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKR
A0A6J1DXQ7 uncharacterized protein LOC1110250883.1e-3262.63Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTK
        E+Q I+DFKRYGPP+FD  SE   AAE W+  LEA++ Y+ C+D+ KV+G VFMLR EA NWW S+A AEDHANVP+ W RFKDLLYDYY+P   + TK
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTK
A0A6J1E0B4 uncharacterized protein LOC1110252133.1e-3268.48Show/hide
Query:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFP
        E++ I+DFKRYGPP+FD  SE   AAE WI  LEA++ Y+ C+D+ KV+GAVFMLR EA NWW SVAAAEDHANVPI W RFK+LLYDYY+P
Subjt:  ESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTCAATTAATTCGCGATTTCAAGCGATATGGCCCTCCCTCTTTCGACAGGCATTCTGAGAACCCGTTGGCAGCCGAGCGTTGGATCGGCAACCTCGAAGCCAT
GTTCGACTATATGAATTGCGACGACCGCTTGAAAGTCCGAGGCGCAGTTTTCATGCTAAGGGATGAAGCCCGAAACTGGTGGAAGTCAGTTGCAGCTGCTGAAGACCATG
CCAATGTGCCAATCTCGTGGGAGAGATTTAAGGATCTGCTTTACGATTACTACTTCCCGAGACCGTCAAGGACGACAAAGAGACTGAGTTCCAGCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTCAATTAATTCGCGATTTCAAGCGATATGGCCCTCCCTCTTTCGACAGGCATTCTGAGAACCCGTTGGCAGCCGAGCGTTGGATCGGCAACCTCGAAGCCAT
GTTCGACTATATGAATTGCGACGACCGCTTGAAAGTCCGAGGCGCAGTTTTCATGCTAAGGGATGAAGCCCGAAACTGGTGGAAGTCAGTTGCAGCTGCTGAAGACCATG
CCAATGTGCCAATCTCGTGGGAGAGATTTAAGGATCTGCTTTACGATTACTACTTCCCGAGACCGTCAAGGACGACAAAGAGACTGAGTTCCAGCACTTAA
Protein sequenceShow/hide protein sequence
MESQLIRDFKRYGPPSFDRHSENPLAAERWIGNLEAMFDYMNCDDRLKVRGAVFMLRDEARNWWKSVAAAEDHANVPISWERFKDLLYDYYFPRPSRTTKRLSSST