; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005372 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005372
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Genome locationchr6:15414842..15416140
RNA-Seq ExpressionLag0005372
SyntenyLag0005372
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR021099 - Plant organelle RNA recognition domain
IPR040295 - Protein root primordium defective 1-like
IPR045040 - PORR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579690.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-16273.15Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        M+QSTSIP+KL+RVRDHGYDNYM+VEKKTRKVLKFQDLILTQINQTIPVSRLDV +RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        EQ+KQAVI QIPDAVTRLRKLLMMSNNGRLRLEHIRIA SEFGLPDDFEYS++LKYPQFFRLFDAKETRNKYIEIVERDPNL                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEML LT+EKKI+LERI HFRLA +LPKKLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G LI                      AK++RELVGYRRERVGYDMESFR D ++D    +GAGD+G VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK
        SDMGSD+ESD SDD N +   TF+ +DVNITK
Subjt:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK

KAG7017132.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-16272.92Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        M+QSTSIP+KL+RVRDHGYDNYM+VEKKTRKVLKFQDLILTQINQTIPVSRLDV +RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        EQ+KQAVI QIPDAVTRLRKLLMMSNNGRLRLEHIRIA SEFGLPDDFEYS++LKYPQFFRLFDAKETRNKYIEIVERDPNL                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEML LT+EKKI+LERI HFRLA +LPKKLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G LI                      AK++RELVGYRRERVGYDMESFR D ++D    +GAGD+G VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK
        SD+GSD+ESD SDD N +   TF+ +DVNITK
Subjt:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK

XP_016898810.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]5.3e-16171.53Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        M+QSTSIPK LQRVRDHGYDNYMEVEKK RKVLKFQDLIL+Q NQTIPVSRLD+L+RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        EQQK+AVI QIPDAVTRLRKLLMMSN GRLRLEHIRIA SEFGLPDDFEYS++LK+PQFFRLFDAKETRNKYIEIVERDP+L                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHEMLSLT+EKK+TLERI HFRLA NLPKKLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G L+                      AK+DRELVGYRRERVGYDME+ RTDYVEDK + FG  +KG VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK
        SD+GSD ESD+SDDDN     + + +DV+IT+
Subjt:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK

XP_022929109.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata]2.5e-16373.15Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        M+QSTSIP+KL+RVRDHGYDNYM+VEKKTRKVLKFQDLILTQINQTIPVSRLDV +RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        EQ+KQAVI QIPDAVTRLRKLLMMSNNGRLRLEHIRIA SEFGLPDDFEYS++LKYPQFFRLFDAKETRNKYIEIVERDPNL                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEML LT+EKKI+LERI HFRLA +LPKKLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G LI                      AK++RELVGYRRERVGYDMESFR D ++D    +GAGD+G VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK
        SD+GSD+ESD+SDD N + D TF+ +DVNITK
Subjt:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK

XP_038876292.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida]4.5e-16874.54Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLD+L+RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        EQQKQAVI QIPDAVTRLRKLLMMSNNGRLRLEHIRIA SEFGLPDDFEYS++LKYPQFFRLFDAKETRNKYIEIVERDPNL                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKY+RIA+WKWQRLPYWSPYEDVS+YDMRSIEA KRMEKRAVATIHEMLSLT+EKKITLERI HFRLA NLP KLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G LI                      AK+D+ELVGYRRERVGYDMESFRTDYVEDKF+ F  G+KG VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK
        SD+ SD E ++SDDDN + D+TFKA+DVN T+
Subjt:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK

TrEMBL top hitse value%identityAlignment
A0A1S4DS47 protein ROOT PRIMORDIUM DEFECTIVE 12.6e-16171.53Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        M+QSTSIPK LQRVRDHGYDNYMEVEKK RKVLKFQDLIL+Q NQTIPVSRLD+L+RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        EQQK+AVI QIPDAVTRLRKLLMMSN GRLRLEHIRIA SEFGLPDDFEYS++LK+PQFFRLFDAKETRNKYIEIVERDP+L                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHEMLSLT+EKK+TLERI HFRLA NLPKKLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G L+                      AK+DRELVGYRRERVGYDME+ RTDYVEDK + FG  +KG VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK
        SD+GSD ESD+SDDDN     + + +DV+IT+
Subjt:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK

A0A5A7UNY2 Protein ROOT PRIMORDIUM DEFECTIVE 12.8e-16073.32Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        M+QSTSIPK LQRVRDHGYDNYMEVEKK RKVLKFQDLIL+Q NQTIPVSRLD+L+RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        EQQK+AVI QIPDAVTRLRKLLMMSN GRLRLEHIRIA SEFGLPDDFEYS++LK+PQFFRLFDAKETRNKYIEIVERDP+L                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHEMLSLT+EKK+TLERI HFRLA NLPKKLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G L+                      AK+DRELVGYRRERVGYDME+ RTDYVEDK + FG  +KG VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDN
        SD+GSD ESD+SDDDN
Subjt:  SDMGSDAESDYSDDDN

A0A5D3BLZ6 Protein ROOT PRIMORDIUM DEFECTIVE 12.6e-16171.53Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        M+QSTSIPK LQRVRDHGYDNYMEVEKK RKVLKFQDLIL+Q NQTIPVSRLD+L+RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        EQQK+AVI QIPDAVTRLRKLLMMSN GRLRLEHIRIA SEFGLPDDFEYS++LK+PQFFRLFDAKETRNKYIEIVERDP+L                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHEMLSLT+EKK+TLERI HFRLA NLPKKLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G L+                      AK+DRELVGYRRERVGYDME+ RTDYVEDK + FG  +KG VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK
        SD+GSD ESD+SDDDN     + + +DV+IT+
Subjt:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK

A0A6J1EMT6 protein ROOT PRIMORDIUM DEFECTIVE 11.2e-16373.15Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        M+QSTSIP+KL+RVRDHGYDNYM+VEKKTRKVLKFQDLILTQINQTIPVSRLDV +RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        EQ+KQAVI QIPDAVTRLRKLLMMSNNGRLRLEHIRIA SEFGLPDDFEYS++LKYPQFFRLFDAKETRNKYIEIVERDPNL                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEML LT+EKKI+LERI HFRLA +LPKKLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G LI                      AK++RELVGYRRERVGYDMESFR D ++D    +GAGD+G VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK
        SD+GSD+ESD+SDD N + D TF+ +DVNITK
Subjt:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK

A0A6J1I4Q3 protein ROOT PRIMORDIUM DEFECTIVE 14.4e-16172.22Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        M+QSTSIPKK++RVRDHGYDNYMEVEKK RKVLKFQDLILTQINQTIPVSRLDV +RRLGFKQHE GAFVLKFPHVFEIYEHPVQ ILYCRLTRKAHLQI
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------
        +QQKQAVI QIPDAVTRLRKLLMMSNNGRLRLEHIRIA SEFGLPDDFEYS++LKYPQFFRLFDAKETRNKYIE+VERDPNL                  
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL------------------

Query:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ
                  +NFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEML LT+EKKI+LERI HFR A +LPKKLK+FLLQ
Subjt:  ---------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQ

Query:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD
        HQGI         G   T+F       G LI                      A+++RELVGYRRERVGYDMES R D ++D    +G GD+G VRDVLD
Subjt:  HQGISTFQPEETMGSF-TLF-----SSGRLI--------------------GGAKIDRELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLD

Query:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK
        SDMGSD+ESD+SDD N + D TF+ +DVNITK
Subjt:  SDMGSDAESDYSDDDNDNDDRTFKADDVNITK

SwissProt top hitse value%identityAlignment
A0MFS5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic5.5e-2025.64Show/hide
Query:  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGF-KQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQIEQQKQAVIT
        ++R ++  +D+ ++ +KK + VL  + ++++Q ++ + +  L    R LG  K+    A + K+P VFEI E     + +   +    L +++ +  +  
Subjt:  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGF-KQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQIEQQKQAVIT

Query:  QIPDA-VTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDP----------------------NLYLNF
        ++ D  V +LRKL+MMS + R+ LE I    ++ GLP +F  +I  +YPQ+FR+      R   +E+   DP                      NL ++ 
Subjt:  QIPDA-VTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDP----------------------NLYLNF

Query:  PP---------GFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQHQGI
        PP         G  + K     + +++ + Y SPY+D S     ++E     EK A   IHE+LSLT EK+  ++ +THFR      ++L+  L++H  +
Subjt:  PP---------GFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQHQGI

Query:  ----------STFQPEETMGSFTLFSSGRLIGGAKIDRELV---------GYRRERVGYDMESFRTDY-VEDKFEHFGAGDKGIVRDVLD-SDMGSDAES
                  S F  E    S  +      +   K+ R LV         G R++  G ++E   +D   E++ E   A +   V   L+  D G+D + 
Subjt:  ----------STFQPEETMGSFTLFSSGRLIGGAKIDRELV---------GYRRERVGYDMESFRTDY-VEDKFEHFGAGDKGIVRDVLD-SDMGSDAES

Query:  DYSDDDN--------DNDDRTFKADDVNI
        D++DD+         D+DD   + D V I
Subjt:  DYSDDDN--------DNDDRTFKADDVNI

B6TTV8 Protein WHAT'S THIS FACTOR 1, chloroplastic4.1e-2327.15Show/hide
Query:  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGF-KQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKA------HLQIEQQ
        ++R ++  +D  ++ +KK + VLK +++++ Q ++ + +  L    R LG  ++  + A + +FP VF++ E  V + L  RLT  A       L++  +
Subjt:  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGF-KQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKA------HLQIEQQ

Query:  KQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNLYLN------------------
         + +      AV +LRKLLMMS   R+ +E +     + GLP +F  ++ L+YPQ+FR+   +  R   +E+   DP L ++                  
Subjt:  KQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNLYLN------------------

Query:  -------------FPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLL
                      P G K+ +     + +++ +PY SPY D S   +RS   +K  EK A   +HE+LSLT+EK+  ++ +THFR      + L+  ++
Subjt:  -------------FPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLL

Query:  QH
        +H
Subjt:  QH

Q65XL5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic1.2e-2529.47Show/hide
Query:  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGF-KQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKA------HLQIEQQ
        ++R ++  +DN ++ +KK + VLK ++++++  ++ + +  L    R LG  ++  + A + +FP VFE+ E  V + L  RLT  A       L ++ +
Subjt:  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGF-KQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKA------HLQIEQQ

Query:  KQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNLYLN------------------
         + +      AVT+LRKLLMMS + R+ +E I    ++ GLP +F  +I L+YPQ+FR+   +  R   +E+   DP L ++                  
Subjt:  KQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNLYLN------------------

Query:  -------------FPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLL
                      P G K+ +     V +++ +PY SPY D S   +RS  A+K  EK A   +HE+LSLT+EK+  ++ +THFR      + L+  L+
Subjt:  -------------FPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLL

Query:  QH
        +H
Subjt:  QH

Q689D6 Protein ROOT PRIMORDIUM DEFECTIVE 11.5e-11871.15Show/hide
Query:  TQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRR--LGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQ
        +QST+IPKK  RVRDHGYDNYMEVEKK RKV+KF  LIL+Q N TI +S LD L+RR  LGFKQHE GAF+LKFPHVFEIYEHPVQ ILYCRLTRKA  Q
Subjt:  TQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRR--LGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQ

Query:  IEQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL-----------------
        I  + +AV+ QIPDAVTRLRKL+MMSN GR+RLEH+RIA +EFGLP+DFEYS+ILK+PQFFRL D +ETR+KYIEIVE+DPNL                 
Subjt:  IEQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL-----------------

Query:  ----------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLL
                   +NFPPGFKIGKY+RIAVWKWQRLPYWSPYED+S YD+RS+EAQ R+EKR+VA IHE+LSLT+EKKITLERI HFR   NLPKKLKEFLL
Subjt:  ----------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLL

Query:  QHQGI
        QHQGI
Subjt:  QHQGI

Q9ZUZ6 Protein WHAT'S THIS FACTOR 9, mitochondrial7.7e-1425.35Show/hide
Query:  RDHGYDNYMEV--EKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQIEQQKQAVITQIP
        RD  +DN   +    + + V+  ++ I+ + N+ IP+S +   +R+      ++  F+ KFP +FE +  P   + + RLT +A     Q++    T   
Subjt:  RDHGYDNYMEV--EKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQIEQQKQAVITQIP

Query:  DAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKE----------TRNKYIEIVERDPNL---------YLNFPPGFKIG
        D   RL+KL++MS +  L L  ++      GLPDD+     +     FR  D ++            +K + +++++             + FP     G
Subjt:  DAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKE----------TRNKYIEIVERDPNL---------YLNFPPGFKIG

Query:  KYYRIAVWKW----QRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQHQGI
           R+ +  W    Q+LPY SPY+D S  D  S  A    EKR V  +HE+L L +E     +++   +    LP+K+ +   +H  I
Subjt:  KYYRIAVWKW----QRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQHQGI

Arabidopsis top hitse value%identityAlignment
AT1G06440.1 Ubiquitin carboxyl-terminal hydrolase family protein2.5e-3631.63Show/hide
Query:  STSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQH---EVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI
        +TS      R RD  ++  M+  K   KV+  QDL L       P   ++ LS RL  K H      +F+ K+PH+F +   PV+   +CRLT  A    
Subjt:  STSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQH---EVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQI

Query:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDP--------------------
         Q+  A+   +   V RL +LL MS +  + L  +   W E GLPDDFE S+I K P  F+L D  E+    +E+V+ +                     
Subjt:  EQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDP--------------------

Query:  -----------NLYLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKE
                   +   ++PPG ++ K ++  V +WQRLPY  PYED+     +S      +EKRAVA  HE L+LT+EK + +E+I+HFR    +   +++
Subjt:  -----------NLYLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKE

Query:  FLLQHQG---ISTFQPEETMGSFTLFSSGRLI
          L H G   +ST     T+     +  GRLI
Subjt:  FLLQHQG---ISTFQPEETMGSFTLFSSGRLI

AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein1.1e-11971.15Show/hide
Query:  TQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRR--LGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQ
        +QST+IPKK  RVRDHGYDNYMEVEKK RKV+KF  LIL+Q N TI +S LD L+RR  LGFKQHE GAF+LKFPHVFEIYEHPVQ ILYCRLTRKA  Q
Subjt:  TQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRR--LGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQ

Query:  IEQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL-----------------
        I  + +AV+ QIPDAVTRLRKL+MMSN GR+RLEH+RIA +EFGLP+DFEYS+ILK+PQFFRL D +ETR+KYIEIVE+DPNL                 
Subjt:  IEQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNL-----------------

Query:  ----------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLL
                   +NFPPGFKIGKY+RIAVWKWQRLPYWSPYED+S YD+RS+EAQ R+EKR+VA IHE+LSLT+EKKITLERI HFR   NLPKKLKEFLL
Subjt:  ----------YLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLL

Query:  QHQGI
        QHQGI
Subjt:  QHQGI

AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein1.0e-2425.55Show/hide
Query:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGF-KQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQ
        MT S  +  + +  R    +   E  K   KV+   +++  + +  + V   +   R++   K H++  F+ K P +FE+Y+   + +L+C LT      
Subjt:  MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGF-KQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQ

Query:  IEQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIV----------------------E
        +++  + +      A   + + LMMS + +L L+ I     +FGLP DF  + +  +PQ F++    +   +Y+E+V                      E
Subjt:  IEQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIV----------------------E

Query:  RDPNLY-----LNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEA-QKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFL
          P +      + FPP +K    YR  +  +Q+  Y SPY D      R +EA  K  +KRA+A +HE+LS T+EK++  + +THFR    +P+KL    
Subjt:  RDPNLY-----LNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEA-QKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFL

Query:  LQHQGISTFQPEETMGSFTLFSSGRLIGGAKIDR-----------ELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLDSDMGSDAESDYSD
        L+H GI  F   E    F++F +    G   I++           +  GYR  +      S   D  E +    G+GD+       D  +G + + DY D
Subjt:  LQHQGISTFQPEETMGSFTLFSSGRLIGGAKIDR-----------ELVGYRRERVGYDMESFRTDYVEDKFEHFGAGDKGIVRDVLDSDMGSDAESDYSD

Query:  DDNDNDD
           D+D+
Subjt:  DDNDNDD

AT5G45790.1 Ubiquitin carboxyl-terminal hydrolase family protein2.3e-3736.92Show/hide
Query:  VGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQIEQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDA
        VGAF+ K+PH FEI+ HP    L C++T K  + I++++  V     DAV R++KLL++S +G LR+  +R+   E GLP+DF  SI+ KY   FRL D 
Subjt:  VGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQIEQQKQAVITQIPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDA

Query:  K-----------------------ETRNKYIEIVERDPNLYLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSI-EAQKRMEKRAVATIHEML
        +                       E R K++   E +    ++ P GFKI K +R  +  WQR+PY  P      YD + I    +R EKR VA IHE+L
Subjt:  K-----------------------ETRNKYIEIVERDPNLYLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSI-EAQKRMEKRAVATIHEML

Query:  SLTMEKKITLERITHFRLATNLPKKLKEFLLQHQGI---STFQPEETMGSFTLFSSGRLI
        SLT+EK + +ER+ HFR    +   ++E +L+H GI   ST    +T+     +S G LI
Subjt:  SLTMEKKITLERITHFRLATNLPKKLKEFLLQHQGI---STFQPEETMGSFTLFSSGRLI

AT5G45790.2 Ubiquitin carboxyl-terminal hydrolase family protein3.2e-3934.6Show/hide
Query:  RVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSR--RLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQIEQQKQAVITQ
        R RDH  D  +   +K   +L+   L+ ++  +  P   L ++SR   L      VGAF+ K+PH FEI+ HP    L C++T K  + I++++  V   
Subjt:  RVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSR--RLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQIEQQKQAVITQ

Query:  IPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAK-----------------------ETRNKYIEIVERDPNLYLNFP
          DAV R++KLL++S +G LR+  +R+   E GLP+DF  SI+ KY   FRL D +                       E R K++   E +    ++ P
Subjt:  IPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAK-----------------------ETRNKYIEIVERDPNLYLNFP

Query:  PGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSI-EAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQHQGI---STFQPE
         GFKI K +R  +  WQR+PY  P      YD + I    +R EKR VA IHE+LSLT+EK + +ER+ HFR    +   ++E +L+H GI   ST    
Subjt:  PGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSI-EAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQHQGI---STFQPE

Query:  ETMGSFTLFSSGRLI
        +T+     +S G LI
Subjt:  ETMGSFTLFSSGRLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCAATCCACCTCCATTCCCAAAAAGCTCCAAAGGGTCCGTGACCATGGTTACGATAATTACATGGAAGTTGAGAAAAAAACCCGAAAAGTCCTCAAGTTTCAGGA
CCTTATTCTCACCCAAATCAATCAAACCATCCCAGTTTCTCGCCTCGATGTCTTATCTCGTCGCCTTGGCTTCAAGCAGCACGAAGTTGGGGCCTTCGTCCTTAAATTCC
CTCATGTATTTGAAATCTACGAGCACCCTGTTCAATGGATCCTCTATTGCAGGTTAACCCGAAAAGCCCACCTCCAAATCGAGCAGCAAAAGCAGGCTGTGATTACCCAG
ATTCCAGATGCTGTGACTCGGCTGAGGAAGCTCTTGATGATGTCCAACAATGGCCGCCTTCGCCTTGAGCACATTCGGATTGCCTGGTCCGAATTCGGGTTACCCGATGA
TTTCGAGTACTCGATAATTCTCAAGTACCCTCAATTCTTTAGACTGTTTGATGCAAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGGGATCCAAACCTTTACT
TGAATTTTCCTCCTGGCTTCAAGATAGGGAAGTATTACAGAATTGCAGTGTGGAAATGGCAGCGACTTCCATATTGGTCGCCTTACGAGGATGTTTCTGAATACGATATG
AGGTCCATTGAAGCTCAAAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCCTTGACTATGGAGAAAAAGATCACCTTGGAACGGATTACGCATTT
TCGATTAGCGACGAATTTGCCAAAGAAGTTGAAGGAGTTCCTTCTTCAGCACCAGGGAATTTCTACATTTCAACCAGAGGAAACCATGGGAAGCTTCACACTGTTTTCCT
CAGGGAGGCTTATAGGAGGAGCAAAAATAGACCGGGAACTTGTTGGGTATAGGAGAGAAAGAGTGGGCTATGATATGGAAAGCTTTAGGACAGATTATGTGGAGGATAAA
TTTGAACATTTTGGTGCTGGGGACAAAGGCATTGTGAGAGATGTTTTGGACTCAGACATGGGTTCTGATGCTGAATCTGATTACTCTGATGACGATAATGATAATGATGA
TAGAACTTTCAAGGCAGACGATGTGAATATAACCAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACCCAATCCACCTCCATTCCCAAAAAGCTCCAAAGGGTCCGTGACCATGGTTACGATAATTACATGGAAGTTGAGAAAAAAACCCGAAAAGTCCTCAAGTTTCAGGA
CCTTATTCTCACCCAAATCAATCAAACCATCCCAGTTTCTCGCCTCGATGTCTTATCTCGTCGCCTTGGCTTCAAGCAGCACGAAGTTGGGGCCTTCGTCCTTAAATTCC
CTCATGTATTTGAAATCTACGAGCACCCTGTTCAATGGATCCTCTATTGCAGGTTAACCCGAAAAGCCCACCTCCAAATCGAGCAGCAAAAGCAGGCTGTGATTACCCAG
ATTCCAGATGCTGTGACTCGGCTGAGGAAGCTCTTGATGATGTCCAACAATGGCCGCCTTCGCCTTGAGCACATTCGGATTGCCTGGTCCGAATTCGGGTTACCCGATGA
TTTCGAGTACTCGATAATTCTCAAGTACCCTCAATTCTTTAGACTGTTTGATGCAAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGGGATCCAAACCTTTACT
TGAATTTTCCTCCTGGCTTCAAGATAGGGAAGTATTACAGAATTGCAGTGTGGAAATGGCAGCGACTTCCATATTGGTCGCCTTACGAGGATGTTTCTGAATACGATATG
AGGTCCATTGAAGCTCAAAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCCTTGACTATGGAGAAAAAGATCACCTTGGAACGGATTACGCATTT
TCGATTAGCGACGAATTTGCCAAAGAAGTTGAAGGAGTTCCTTCTTCAGCACCAGGGAATTTCTACATTTCAACCAGAGGAAACCATGGGAAGCTTCACACTGTTTTCCT
CAGGGAGGCTTATAGGAGGAGCAAAAATAGACCGGGAACTTGTTGGGTATAGGAGAGAAAGAGTGGGCTATGATATGGAAAGCTTTAGGACAGATTATGTGGAGGATAAA
TTTGAACATTTTGGTGCTGGGGACAAAGGCATTGTGAGAGATGTTTTGGACTCAGACATGGGTTCTGATGCTGAATCTGATTACTCTGATGACGATAATGATAATGATGA
TAGAACTTTCAAGGCAGACGATGTGAATATAACCAAATAG
Protein sequenceShow/hide protein sequence
MTQSTSIPKKLQRVRDHGYDNYMEVEKKTRKVLKFQDLILTQINQTIPVSRLDVLSRRLGFKQHEVGAFVLKFPHVFEIYEHPVQWILYCRLTRKAHLQIEQQKQAVITQ
IPDAVTRLRKLLMMSNNGRLRLEHIRIAWSEFGLPDDFEYSIILKYPQFFRLFDAKETRNKYIEIVERDPNLYLNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDM
RSIEAQKRMEKRAVATIHEMLSLTMEKKITLERITHFRLATNLPKKLKEFLLQHQGISTFQPEETMGSFTLFSSGRLIGGAKIDRELVGYRRERVGYDMESFRTDYVEDK
FEHFGAGDKGIVRDVLDSDMGSDAESDYSDDDNDNDDRTFKADDVNITK