; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005381 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005381
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionfimbrin-5
Genome locationchr6:15733254..15737027
RNA-Seq ExpressionLag0005381
SyntenyLag0005381
Gene Ontology termsGO:0051017 - actin filament bundle assembly (biological process)
GO:0051639 - actin filament network formation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005884 - actin filament (cellular component)
GO:0032432 - actin filament bundle (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR036872 - CH domain superfamily
IPR039959 - Fimbrin/Plastin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059149.1 fimbrin-5 [Cucumis melo var. makuwa]7.7e-2465.71Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-
        +P +L    S    IQ+LADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK       G  +  ++  +A ++S 
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-

Query:  PGAIN
        PG +N
Subjt:  PGAIN
XP_004144532.1 fimbrin-5 [Cucumis sativus]7.7e-2465.71Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-
        +P +L    S    IQ+LADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK       G  +  ++  +A ++S 
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-

Query:  PGAIN
        PG +N
Subjt:  PGAIN
XP_008455508.1 PREDICTED: fimbrin-5 [Cucumis melo]7.7e-2465.71Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-
        +P +L    S    IQ+LADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK       G  +  ++  +A ++S 
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-

Query:  PGAIN
        PG +N
Subjt:  PGAIN
XP_022136248.1 fimbrin-5 [Momordica charantia]3.5e-2466.67Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-
        +P +L    S    IQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK       G  +  ++  +A ++S 
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-

Query:  PGAIN
        PG +N
Subjt:  PGAIN
XP_038888540.1 fimbrin-5-like [Benincasa hispida]7.7e-2465.71Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-
        +P +L    S    IQ+LADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK       G  +  ++  +A ++S 
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-

Query:  PGAIN
        PG +N
Subjt:  PGAIN
TrEMBL top hitse value%identityAlignment
A0A0A0K1W9 Uncharacterized protein3.7e-2465.71Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-
        +P +L    S    IQ+LADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK       G  +  ++  +A ++S 
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-

Query:  PGAIN
        PG +N
Subjt:  PGAIN
A0A1S4E0J8 fimbrin-53.7e-2465.71Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-
        +P +L    S    IQ+LADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK       G  +  ++  +A ++S 
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-

Query:  PGAIN
        PG +N
Subjt:  PGAIN
A0A5A7V024 Fimbrin-53.7e-2465.71Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-
        +P +L    S    IQ+LADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK       G  +  ++  +A ++S 
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-

Query:  PGAIN
        PG +N
Subjt:  PGAIN
A0A6J1C3S9 fimbrin-51.7e-2466.67Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-
        +P +L    S    IQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK       G  +  ++  +A ++S 
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWS-

Query:  PGAIN
        PG +N
Subjt:  PGAIN
A0A6J1HV69 fimbrin-5-like5.4e-2381.58Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        +P +L    S    IQ+LADLNL KTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSS VK
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
SwissProt top hitse value%identityAlignment
O50064 Fimbrin-24.5e-1977.42Show/hide
Query:  IQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        IQLLADLNLKKTPQLVELV DSK+VEEL+ L PEK+LL+WMNF L+K  Y+K VTNFSS VK
Subjt:  IQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
Q7G188 Fimbrin-12.0e-1964.47Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        +P ++    S    IQ+LADLNLKKTPQLVEL++DS +VEEL+ L PEKVLLKWMNFHLKK GY+K V+NFS+ +K
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
Q9FJ70 Fimbrin-33.8e-1861.84Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        +P ++    S    IQLLADL+LKK PQLVELV+D++++EE + L PEKVLLKWMNFHLKK GY+K V NFSS +K
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
Q9FKI0 Fimbrin-57.5e-2268.42Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        +P ++    S    IQ+LADLN KKTP L +LVDD+++ EEL+GLAPEKVLLKWMNFHLKKAGYEKQVTNFSS +K
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
Q9SJ84 Fimbrin-42.3e-2387.1Show/hide
Query:  IQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        IQLLADLNLKKTPQLVELV+++++VEEL+GLAPEK+LLKWMNFHLKKAGYEKQVTNFSS VK
Subjt:  IQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
Arabidopsis top hitse value%identityAlignment
AT2G04750.1 Actin binding Calponin homology (CH) domain-containing protein1.7e-2487.1Show/hide
Query:  IQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        IQLLADLNLKKTPQLVELV+++++VEEL+GLAPEK+LLKWMNFHLKKAGYEKQVTNFSS VK
Subjt:  IQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
AT4G26700.1 fimbrin 11.4e-2064.47Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        +P ++    S    IQ+LADLNLKKTPQLVEL++DS +VEEL+ L PEKVLLKWMNFHLKK GY+K V+NFS+ +K
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
AT4G26700.2 fimbrin 11.4e-2064.47Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        +P ++    S    IQ+LADLNLKKTPQLVEL++DS +VEEL+ L PEKVLLKWMNFHLKK GY+K V+NFS+ +K
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
AT4G26700.3 fimbrin 11.4e-2064.47Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        +P ++    S    IQ+LADLNLKKTPQLVEL++DS +VEEL+ L PEKVLLKWMNFHLKK GY+K V+NFS+ +K
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
AT5G35700.1 fimbrin-like protein 25.3e-2368.42Show/hide
Query:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK
        +P ++    S    IQ+LADLN KKTP L +LVDD+++ EEL+GLAPEKVLLKWMNFHLKKAGYEKQVTNFSS +K
Subjt:  KPLVLFSSSSITYMIQLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGAGCGAGATTCCAAGGCTCGGGATTCGAGATGATCGTGATGGGAGCTTGGGATCAACTTATCGATTATTTCTTCTTTACTTCTTTTTCGCCTCTTCATCTTC
TTTGCATGTGTTTGTTGCCATCGTCGAGCAGCTTGCTGTAGTTTTCTCTGGGTTTCCGCCGCCGTCGAAGTTGTGTCGTCTGGGTTTATTCGCCATCGCCGCCGCCGCTG
AAACTTGTTGTTGGGTAATTATTTTGTTTGGGTTTTTGCCGCCGTCAGAGCTTGCTGTCTGGTTAAAGCCACTGGTGCTTTTCAGCTCTTCTTCAATCACTTATATGATT
CAACTGTTGGCTGATCTTAATCTGAAGAAAACTCCTCAGCTTGTGGAACTGGTGGATGATAGCAAGGAAGTGGAAGAACTCATAGGATTGGCACCAGAGAAGGTTTTACT
CAAATGGATGAACTTTCATCTGAAGAAAGCTGGCTATGAGAAACAAGTCACAAACTTTTCATCACATGTGAAGGTTAGAAGATGGCCACCTGTTGGGTTTCATCACCAAG
CGATTGTTCGAGGGGTTGCTATAGACTGGAGCCCAGGTGCGATAAATTCCTTACTCCAAGATTTCCCCCACCTCGGATATAACGAGATAGTGGTAGCACCATCTAATGAT
CAAATGAATGCGACCACGAGAGAAGTTGGGATTGAAGGGACTCAGTGGAGGTTGTCAAAGACAGAAAAACGCACGTTTCAAGCTGCATATTTGAAGCGCGAAGCAAACAC
CATGTTGGGCTTCGTCAAACAGCGTCTTCTGCCGACAACCCATGATTCTAGAGTCTCCCATGATAGAGTGCTCATGGTTTTTGCAATCCTGAGGTCCCTGAGTATTGATG
TTTGTAAGAATATCTCCAGTGAAATTCATAACTGCAGGCACAAAAAGGTGGGCAAATTGTTCTTTCCGAATACAATTACGATGTTGTGTAATAGGGCAGGGGTACCTGCA
ACTTCAGAGGATGTGATTCTGATTGACAAAGGGATTATTGACACACCCAACCTACCAAGGCTTCAACGGACTCAAGAAGTTCGACAAGGGGGGCTAGTGTGCAACATCCA
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGAGCGAGATTCCAAGGCTCGGGATTCGAGATGATCGTGATGGGAGCTTGGGATCAACTTATCGATTATTTCTTCTTTACTTCTTTTTCGCCTCTTCATCTTC
TTTGCATGTGTTTGTTGCCATCGTCGAGCAGCTTGCTGTAGTTTTCTCTGGGTTTCCGCCGCCGTCGAAGTTGTGTCGTCTGGGTTTATTCGCCATCGCCGCCGCCGCTG
AAACTTGTTGTTGGGTAATTATTTTGTTTGGGTTTTTGCCGCCGTCAGAGCTTGCTGTCTGGTTAAAGCCACTGGTGCTTTTCAGCTCTTCTTCAATCACTTATATGATT
CAACTGTTGGCTGATCTTAATCTGAAGAAAACTCCTCAGCTTGTGGAACTGGTGGATGATAGCAAGGAAGTGGAAGAACTCATAGGATTGGCACCAGAGAAGGTTTTACT
CAAATGGATGAACTTTCATCTGAAGAAAGCTGGCTATGAGAAACAAGTCACAAACTTTTCATCACATGTGAAGGTTAGAAGATGGCCACCTGTTGGGTTTCATCACCAAG
CGATTGTTCGAGGGGTTGCTATAGACTGGAGCCCAGGTGCGATAAATTCCTTACTCCAAGATTTCCCCCACCTCGGATATAACGAGATAGTGGTAGCACCATCTAATGAT
CAAATGAATGCGACCACGAGAGAAGTTGGGATTGAAGGGACTCAGTGGAGGTTGTCAAAGACAGAAAAACGCACGTTTCAAGCTGCATATTTGAAGCGCGAAGCAAACAC
CATGTTGGGCTTCGTCAAACAGCGTCTTCTGCCGACAACCCATGATTCTAGAGTCTCCCATGATAGAGTGCTCATGGTTTTTGCAATCCTGAGGTCCCTGAGTATTGATG
TTTGTAAGAATATCTCCAGTGAAATTCATAACTGCAGGCACAAAAAGGTGGGCAAATTGTTCTTTCCGAATACAATTACGATGTTGTGTAATAGGGCAGGGGTACCTGCA
ACTTCAGAGGATGTGATTCTGATTGACAAAGGGATTATTGACACACCCAACCTACCAAGGCTTCAACGGACTCAAGAAGTTCGACAAGGGGGGCTAGTGTGCAACATCCA
TTAG
Protein sequenceShow/hide protein sequence
MELSEIPRLGIRDDRDGSLGSTYRLFLLYFFFASSSSLHVFVAIVEQLAVVFSGFPPPSKLCRLGLFAIAAAAETCCWVIILFGFLPPSELAVWLKPLVLFSSSSITYMI
QLLADLNLKKTPQLVELVDDSKEVEELIGLAPEKVLLKWMNFHLKKAGYEKQVTNFSSHVKVRRWPPVGFHHQAIVRGVAIDWSPGAINSLLQDFPHLGYNEIVVAPSND
QMNATTREVGIEGTQWRLSKTEKRTFQAAYLKREANTMLGFVKQRLLPTTHDSRVSHDRVLMVFAILRSLSIDVCKNISSEIHNCRHKKVGKLFFPNTITMLCNRAGVPA
TSEDVILIDKGIIDTPNLPRLQRTQEVRQGGLVCNIH