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Lag0005394 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005394
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionelongation of fatty acids protein 3-like
Genome locationchr6:16343090..16344005
RNA-Seq ExpressionLag0005394
SyntenyLag0005394
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0009922 - fatty acid elongase activity (molecular function)
InterPro domainsIPR002076 - ELO family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595084.1 Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4183.78Show/hide
Query:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR
        M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFS A+HLFLSLLLR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIR
Subjt:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR

Query:  DTWWFWRRSKT
        DT WFWRRSKT
Subjt:  DTWWFWRRSKT

XP_022962893.1 elongation of fatty acids protein 3-like [Cucurbita moschata]9.3e-4182.88Show/hide
Query:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR
        M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY A S A+HLFLSLLLR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIR
Subjt:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR

Query:  DTWWFWRRSKT
        DT WFWRRSKT
Subjt:  DTWWFWRRSKT

XP_023004077.1 elongation of fatty acids protein 3-like [Cucurbita maxima]1.9e-4183.78Show/hide
Query:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR
        M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFS A+HLFLSLLLR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIR
Subjt:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR

Query:  DTWWFWRRSKT
        DT WFWRRSKT
Subjt:  DTWWFWRRSKT

XP_023518252.1 elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo]1.9e-4183.78Show/hide
Query:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR
        M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFS A+HLFLSLLLR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIR
Subjt:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR

Query:  DTWWFWRRSKT
        DT WFWRRSKT
Subjt:  DTWWFWRRSKT

XP_038880984.1 elongation of fatty acids protein 3-like [Benincasa hispida]2.2e-4285.84Show/hide
Query:  MSPRI--MSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATE
        MSP I  ++I DFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSI FY AFSTAVHLFLSLLLR GRPVPLGPI AIHCLSMA    LISAGILLSSA E
Subjt:  MSPRI--MSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATE

Query:  IRDTWWFWRRSKT
        IRDT WFWRRSKT
Subjt:  IRDTWWFWRRSKT

TrEMBL top hitse value%identityAlignment
A0A0A0KL12 Uncharacterized protein1.2e-3880.18Show/hide
Query:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR
        MS  I+ I DFTYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY A STA+HLFL+LLLR GR VPLGPI AIH LSMA    LISAGILLSS  EIR
Subjt:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR

Query:  DTWWFWRRSKT
        DT WFWRRSKT
Subjt:  DTWWFWRRSKT

A0A1S3B0F3 elongation of fatty acids protein 3-like2.9e-4081.98Show/hide
Query:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR
        MSP I+ I DFTYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFSTA+HLFL+LLLR GR VPLGPI AIH LSMA    LISAGILLSS  EIR
Subjt:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR

Query:  DTWWFWRRSKT
        DT WFWRRSKT
Subjt:  DTWWFWRRSKT

A0A6J1BT67 elongation of fatty acids protein 3-like2.5e-3983.02Show/hide
Query:  MSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSM----ALISAGILLSSATEIRDTWWF
        M I D TYWLSEHP+IVGFRWSH+HSWGSTWSFLFSSI FY  FSTA+HLFL LLLR GRPVPLGPI AIHCLSM    ALISAGILLSSA EIRDT WF
Subjt:  MSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSM----ALISAGILLSSATEIRDTWWF

Query:  WRRSKT
        WRRSKT
Subjt:  WRRSKT

A0A6J1HG46 elongation of fatty acids protein 3-like4.5e-4182.88Show/hide
Query:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR
        M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY A S A+HLFLSLLLR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIR
Subjt:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR

Query:  DTWWFWRRSKT
        DT WFWRRSKT
Subjt:  DTWWFWRRSKT

A0A6J1KPE4 elongation of fatty acids protein 3-like9.1e-4283.78Show/hide
Query:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR
        M   IM ITD TYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSI FY AFS A+HLFLSLLLR GRPVPLGPI AIHCLSMA    LISAGILLSSA EIR
Subjt:  MSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMA----LISAGILLSSATEIR

Query:  DTWWFWRRSKT
        DT WFWRRSKT
Subjt:  DTWWFWRRSKT

SwissProt top hitse value%identityAlignment
Q9SYY4 Elongation of fatty acids protein 3-like4.7e-2759.13Show/hide
Query:  MSTAMSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMALIS----AGILLSSA
        MSTA+      I   TY+LSEHP IVGFRWS++ SWGSTWSFLF+SI+ Y A S+++H+ LS + R  R VPLG I  IH L M+++S    AGILLS+A
Subjt:  MSTAMSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMALIS----AGILLSSA

Query:  TEIRDTWWFWRRSKT
         EIRDT W WRRSKT
Subjt:  TEIRDTWWFWRRSKT

Arabidopsis top hitse value%identityAlignment
AT1G75000.1 GNS1/SUR4 membrane protein family7.9e-2251.4Show/hide
Query:  ITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLG---RPVPLGPIIAIHCLSMALISA----GILLSSATEIRDTWW
        +T F Y+L+EHP IV FRWS T S+ STWSFLF++++ Y   +  +HL L + L L    R   LGPI A+H L++++ISA    GILLS+A EIRDT W
Subjt:  ITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLG---RPVPLGPIIAIHCLSMALISA----GILLSSATEIRDTWW

Query:  FWRRSKT
         WRR++T
Subjt:  FWRRSKT

AT3G06460.1 GNS1/SUR4 membrane protein family7.5e-0436.99Show/hide
Query:  TYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMALIS
        TYWL  HP I  F W+   + GST  F+F  ++ Y + +  +   +  L  LG P  L PI A+H L + L+S
Subjt:  TYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMALIS

AT4G36830.1 GNS1/SUR4 membrane protein family3.3e-2859.13Show/hide
Query:  MSTAMSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMALIS----AGILLSSA
        MSTA+      I   TY+LSEHP IVGFRWS++ SWGSTWSFLF+SI+ Y A S+++H+ LS + R  R VPLG I  IH L M+++S    AGILLS+A
Subjt:  MSTAMSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMALIS----AGILLSSA

Query:  TEIRDTWWFWRRSKT
         EIRDT W WRRSKT
Subjt:  TEIRDTWWFWRRSKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCCATCACTTTGGCGTGAATCCCACGCTCTGCCGTCTGATCGTTCCCTCTTAATGTCGACGGCGATGTCGCCTAGAATCATGTCGATTACCGATTTCACCTA
CTGGCTGTCGGAGCACCCCGCCATCGTCGGATTTCGTTGGAGCCACACCCATTCATGGGGCTCCACTTGGTCCTTCCTCTTCTCTTCCATCACCTTTTACTTTGCCTTCT
CCACCGCCGTCCATCTCTTCCTCAGCCTCCTCCTCCGCCTTGGCCGTCCTGTCCCTCTCGGCCCCATTATAGCCATCCATTGCCTCTCCATGGCTCTCATCTCCGCCGGG
ATCCTCCTCTCCTCCGCCACCGAGATTCGCGACACATGGTGGTTCTGGCGGCGTTCCAAAACCCTTTCCAGTGGCTCCTTTGTTTCCCCTTGGGCACTTGCCCTTCTGGC
CGCATCTTCTTCTGGTCGTACATCTACTATATATCCCGATTCTTCCATATGTTCCGTACCATCTTCACCATTCTCCGACGACGACGGCTCTCCTTCTTCCAACTCTTCAA
CCATTCGATTTCGACGTTCTTGCGATTCTGTTGACTTCGCTGGTGTACGCAGTGGTTTACGGATACAGATTTTGGACGACGATTGGTTTGCGAAGGGCTTGTTTCCCTTT
CGTGATAAACTGTCAATTCTTCCTGTTGGATTGCAACCTGGCCTGCCATGTGGGCGTTTTGATGCTGCACTTTATGAAAGGTGGGTGCAACAGAATTGGGGCTTGGGGTT
TCAATACGGTGCTCAATGGAGCGATTTTGTTGTTGTTCTTGAACTTCTATCTCAAAATTCGTCTGGGGAAGTCGCAGGATTCTTTAAAGATGATCAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCCATCACTTTGGCGTGAATCCCACGCTCTGCCGTCTGATCGTTCCCTCTTAATGTCGACGGCGATGTCGCCTAGAATCATGTCGATTACCGATTTCACCTA
CTGGCTGTCGGAGCACCCCGCCATCGTCGGATTTCGTTGGAGCCACACCCATTCATGGGGCTCCACTTGGTCCTTCCTCTTCTCTTCCATCACCTTTTACTTTGCCTTCT
CCACCGCCGTCCATCTCTTCCTCAGCCTCCTCCTCCGCCTTGGCCGTCCTGTCCCTCTCGGCCCCATTATAGCCATCCATTGCCTCTCCATGGCTCTCATCTCCGCCGGG
ATCCTCCTCTCCTCCGCCACCGAGATTCGCGACACATGGTGGTTCTGGCGGCGTTCCAAAACCCTTTCCAGTGGCTCCTTTGTTTCCCCTTGGGCACTTGCCCTTCTGGC
CGCATCTTCTTCTGGTCGTACATCTACTATATATCCCGATTCTTCCATATGTTCCGTACCATCTTCACCATTCTCCGACGACGACGGCTCTCCTTCTTCCAACTCTTCAA
CCATTCGATTTCGACGTTCTTGCGATTCTGTTGACTTCGCTGGTGTACGCAGTGGTTTACGGATACAGATTTTGGACGACGATTGGTTTGCGAAGGGCTTGTTTCCCTTT
CGTGATAAACTGTCAATTCTTCCTGTTGGATTGCAACCTGGCCTGCCATGTGGGCGTTTTGATGCTGCACTTTATGAAAGGTGGGTGCAACAGAATTGGGGCTTGGGGTT
TCAATACGGTGCTCAATGGAGCGATTTTGTTGTTGTTCTTGAACTTCTATCTCAAAATTCGTCTGGGGAAGTCGCAGGATTCTTTAAAGATGATCAAGCTTGA
Protein sequenceShow/hide protein sequence
MASPSLWRESHALPSDRSLLMSTAMSPRIMSITDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSITFYFAFSTAVHLFLSLLLRLGRPVPLGPIIAIHCLSMALISAG
ILLSSATEIRDTWWFWRRSKTLSSGSFVSPWALALLAASSSGRTSTIYPDSSICSVPSSPFSDDDGSPSSNSSTIRFRRSCDSVDFAGVRSGLRIQILDDDWFAKGLFPF
RDKLSILPVGLQPGLPCGRFDAALYERWVQQNWGLGFQYGAQWSDFVVVLELLSQNSSGEVAGFFKDDQA