CuGenDBv2

Gene ID	Lag0005405
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	NLR family CARD domain-containing protein 3
Genome location	chr6:16893335..16896192
RNA-Seq Expression	Lag0005405
Synteny	Lag0005405
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR001611 - Leucine-rich repeat IPR032675 - Leucine-rich repeat domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6599019.1 NLR family CARD domain-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-27

95.65

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        ELH+NGNS+GDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEF+KRTKSLVLLNLFMNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

KAG7029980.1 NLR family CARD domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-27

95.65

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        ELH+NGNS+GDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEF+KRTKSLVLLNLFMNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

XP_022946525.1 NLR family CARD domain-containing protein 3 [Cucurbita moschata]

1.2e-27

95.65

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        ELH+NGNS+GDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEF+KRTKSLVLLNLFMNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

XP_022999141.1 NLR family CARD domain-containing protein 3 [Cucurbita maxima]

1.2e-27

95.65

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        ELH+NGNS+GDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEF+KRTKSLVLLNLFMNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

XP_023520466.1 NLR family CARD domain-containing protein 3 [Cucurbita pepo subsp. pepo]

1.2e-27

95.65

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        ELH+NGNS+GDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEF+KRTKSLVLLNLFMNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTU5 Uncharacterized protein

2.2e-27

91.43

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Query:  MELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        +ELH+NGNSIGDEGVR LISGLSSRKGKLALLDIGNNSITAKG FHVAEF+KRTKSLVLLNL+MNDIGDE
Subjt:  MELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

A0A5A7VH09 Protein NLRC3

1.4e-26

92.75

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        EL++NGNSIGDEGVR LISGLSSRKGKLALLDIGNNSITAKG FHVAEFIKRTKSLVLLNL+MNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

A0A6J1DXV6 NLR family CARD domain-containing protein 3

9.9e-28

95.65

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        ELH+NGNSIGDEGVRALISGLSSRKGKL+LLDIGNNSITAKGVFHVAE+IKRTKSLVLLNLFMNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

A0A6J1G438 NLR family CARD domain-containing protein 3

5.8e-28

95.65

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        ELH+NGNS+GDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEF+KRTKSLVLLNLFMNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

A0A6J1KC90 NLR family CARD domain-containing protein 3

5.8e-28

95.65

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        ELH+NGNS+GDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEF+KRTKSLVLLNLFMNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

SwissProt top hits

e value

%identity

Alignment

A6H639 Dynein regulatory complex subunit 5

7.4e-04

39.13

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        EL ++ N IGD G RA    LS    +L +L++ NN + A G   +A  +    +LV LNL +N I DE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

A6QLE5 NACHT, LRR and PYD domains-containing protein 3

6.7e-05

37.31

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Query:  LHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGD
        L++ GN++GD GV+ L  GL  R  KL +L++ N S+T+   + ++  +   +SL  L L  ND+GD
Subjt:  LHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGD

B0FPE9 NACHT, LRR and PYD domains-containing protein 3

1.9e-04

32.84

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Query:  LHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGD
        L++ GN++GD+G++ L  GL     KL +L++ N ++T+   + ++  +  ++SL  L+L  ND+GD
Subjt:  LHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGD

O75864 Protein phosphatase 1 regulatory subunit 37

9.6e-04

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Query:  SIPWASMSMELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDI
        ++P       L++  N IG+EGVR L +GL S +  L  L + +  +T +G   VAEFI  +  L+ L+L  N+I
Subjt:  SIPWASMSMELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDI

Q96P20 NACHT, LRR and PYD domains-containing protein 3

1.9e-04

32.84

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Query:  LHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGD
        L++ GN++GD+G++ L  GL     KL +L++ N ++T+   + ++  +  ++SL  L+L  ND+GD
Subjt:  LHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGD

Arabidopsis top hits

e value

%identity

Alignment

AT1G10510.1 RNI-like superfamily protein

7.0e-26

78.26

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE
        ELH++GNSIGDEG RAL++GLSS KGK+ALLD+GNNSI+AKG F+VAE+IKR+KSLV LNL+MNDIGDE
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDE

AT3G63130.1 RAN GTPase activating protein 1

3.4e-04

32.88

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDEESSL
        E++++  ++ DEG  AL   L      L +L++  N IT K   ++A  I   +SL  LNL  N++ DE + L
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDEESSL

AT3G63130.2 RAN GTPase activating protein 1

3.4e-04

32.88

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Query:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDEESSL
        E++++  ++ DEG  AL   L      L +L++  N IT K   ++A  I   +SL  LNL  N++ DE + L
Subjt:  ELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDEESSL

Sequences

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CDS sequence

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ATGACTTACGAGGAACTGAAGAGCATACCTTGGGCATCCATGAGTATGGAACTTCACATCAATGGAAATTCAATTGGTGATGAGGGAGTGCGTGCTTTAATTTCAGGTTT
ATCTTCACGTAAAGGAAAACTTGCACTTCTTGACATTGGCAACAACTCAATCACTGCCAAGGGTGTCTTTCATGTTGCCGAATTCATTAAGAGAACTAAGAGCTTGGTTT
TATTGAATTTGTTCATGAATGATATTGGTGATGAGGAAAGCAGTTTGGATACCCAACATAATGCTATCATTTTGTTCTTCTCATAG

mRNA sequence

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Protein sequence

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MTYEELKSIPWASMSMELHINGNSIGDEGVRALISGLSSRKGKLALLDIGNNSITAKGVFHVAEFIKRTKSLVLLNLFMNDIGDEESSLDTQHNAIILFFS

Lag0005405 (gene) of Sponge gourd (AG-4) v1 genome