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Lag0005410 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005410
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPotassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome locationchr6:17017120..17017538
RNA-Seq ExpressionLag0005410
SyntenyLag0005410
Gene Ontology termsGO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152910.2 uncharacterized protein LOC101210146 [Cucumis sativus]5.1e-1378Show/hide
Query:  KARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        K  PPN EIGWKRTK+I++EKPIGWMIMDFL+KLE LMEREFGSTE   K
Subjt:  KARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
XP_008452345.1 PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]6.7e-1355.68Show/hide
Query:  FPFTYLSLSPLERASNREAKKIRNSPPKKTHKGN---RKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        FP    + S L +      +K R S   +  K      K  PPN EIGWKRTK+INLEKPIGWMIMDFL+KLE LMEREFGSTE   K
Subjt:  FPFTYLSLSPLERASNREAKKIRNSPPKKTHKGN---RKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
XP_022932131.1 uncharacterized protein LOC111438454 [Cucurbita moschata]5.1e-1351.55Show/hide
Query:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSP---PKKTHKGNRKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        S SS     FP        L +  +   +K R S     ++  K   K  PPN EIGWKRTK+INLEKP+GWMIMDFL+KLE LMEREFGSTE   K
Subjt:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSP---PKKTHKGNRKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
XP_022985263.1 uncharacterized protein LOC111483306 [Cucurbita maxima]5.1e-1350.52Show/hide
Query:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSPPKKTHKGNR---KARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        S SS     FP        L +  +   +K R S   +  + ++   K  PPN EIGWKRTK+INLEKP+GWMIMDFL+KLE LMEREFGSTE   K
Subjt:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSPPKKTHKGNR---KARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
XP_023520419.1 uncharacterized protein LOC111783811 isoform X1 [Cucurbita pepo subsp. pepo]8.8e-1351.55Show/hide
Query:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSP---PKKTHKGNRKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        S SS     FP        L +  +   +K R S     ++  K   K  PPN EIGWKRTK+INLEKP+GWMIMDFL+KLE LMEREFGSTE   K
Subjt:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSP---PKKTHKGNRKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
TrEMBL top hitse value%identityAlignment
A0A0A0L6D8 Uncharacterized protein2.5e-1378Show/hide
Query:  KARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        K  PPN EIGWKRTK+I++EKPIGWMIMDFL+KLE LMEREFGSTE   K
Subjt:  KARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
A0A1S3BT06 uncharacterized protein LOC1034934033.2e-1355.68Show/hide
Query:  FPFTYLSLSPLERASNREAKKIRNSPPKKTHKGN---RKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        FP    + S L +      +K R S   +  K      K  PPN EIGWKRTK+INLEKPIGWMIMDFL+KLE LMEREFGSTE   K
Subjt:  FPFTYLSLSPLERASNREAKKIRNSPPKKTHKGN---RKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 14.2e-1355.68Show/hide
Query:  FPFTYLSLSPLERASNREAKKIRNSPPKKTHKGN---RKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        FP      S L +      +K R S   +  K      K  PPN EIGWKRTK+INLEKPIGWMIMDFL+KLE LMEREFGSTE   K
Subjt:  FPFTYLSLSPLERASNREAKKIRNSPPKKTHKGN---RKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
A0A6J1EVI2 uncharacterized protein LOC1114384542.5e-1351.55Show/hide
Query:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSP---PKKTHKGNRKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        S SS     FP        L +  +   +K R S     ++  K   K  PPN EIGWKRTK+INLEKP+GWMIMDFL+KLE LMEREFGSTE   K
Subjt:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSP---PKKTHKGNRKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
A0A6J1JD53 uncharacterized protein LOC1114833062.5e-1350.52Show/hide
Query:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSPPKKTHKGNR---KARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        S SS     FP        L +  +   +K R S   +  + ++   K  PPN EIGWKRTK+INLEKP+GWMIMDFL+KLE LMEREFGSTE   K
Subjt:  SSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSPPKKTHKGNR---KARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G51100.1 unknown protein1.3e-1455.26Show/hide
Query:  PLERASNREAKKIRNSPPKKTHKGNRKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK
        P+E+   R ++ IR+    +T +G  K  PPN EIGWKRTK+INLEKP G++IMDFL+K E LM REFGS E   K
Subjt:  PLERASNREAKKIRNSPPKKTHKGNRKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCTCTCTCGTCCTCATCTACGGTTGGTTTTCGTTTTCCGTTTACTTACCTCTCTCTCTCTCCGTTGGAGAGAGCTTCCAATCGAGAAGCGAAGAAGATCCGAAA
TAGTCCGCCAAAGAAGACCCACAAAGGAAATCGCAAAGCTAGACCGCCCAACGTCGAAATCGGGTGGAAGAGGACGAAGAAGATCAATTTGGAGAAACCGATCGGGTGGA
TGATAATGGACTTTCTGGATAAGCTTGAACGGCTAATGGAGAGGGAATTTGGGTCGACGGAGTACTGGCCAAAGTGGGAGAGATTGTGGGCAAAGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCTCTCTCGTCCTCATCTACGGTTGGTTTTCGTTTTCCGTTTACTTACCTCTCTCTCTCTCCGTTGGAGAGAGCTTCCAATCGAGAAGCGAAGAAGATCCGAAA
TAGTCCGCCAAAGAAGACCCACAAAGGAAATCGCAAAGCTAGACCGCCCAACGTCGAAATCGGGTGGAAGAGGACGAAGAAGATCAATTTGGAGAAACCGATCGGGTGGA
TGATAATGGACTTTCTGGATAAGCTTGAACGGCTAATGGAGAGGGAATTTGGGTCGACGGAGTACTGGCCAAAGTGGGAGAGATTGTGGGCAAAGGGATAA
Protein sequenceShow/hide protein sequence
MFSLSSSSTVGFRFPFTYLSLSPLERASNREAKKIRNSPPKKTHKGNRKARPPNVEIGWKRTKKINLEKPIGWMIMDFLDKLERLMEREFGSTEYWPKWERLWAKG