; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005421 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005421
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:17371674..17372746
RNA-Seq ExpressionLag0005421
SyntenyLag0005421
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4268750.1 unnamed protein product [Prunus armeniaca]3.4e-1828.72Show/hide
Query:  TDSLEVVLRSMSKFHIDAVIK--EAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK------------------------
        TD L + LRS S  HID  ++    +  WRFTGFYG P  + R  SW+LL RL + +SL WL  GDFNE+L+ +EK                        
Subjt:  TDSLEVVLRSMSKFHIDAVIK--EAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK------------------------

Query:  ------------------------------------------HLDFHLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQ-
                                                  HL+   SDH PI I  +   +   R R+   FRFEE+W Q E+CME +   W  P   
Subjt:  ------------------------------------------HLDFHLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQ-

Query:  ---------------RSTGEQEGVANVWRAQVHQEVVSGGEVSEA-------------RGRLERLLGEEEIYWRQRSRVDWM
                       R  G   G+      Q+       GE+ EA               +L+ L+ + EIYWRQRSR  W+
Subjt:  ---------------RSTGEQEGVANVWRAQVHQEVVSGGEVSEA-------------RGRLERLLGEEEIYWRQRSRVDWM

PON56647.1 Endonuclease/exonuclease/phosphatase [Trema orientale]2.6e-1830.89Show/hide
Query:  VVLRSMSKFHIDA-VIKEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNE-------------------------------
        V + S S  HIDA V+ E K HWRFTGFYG P  S R  SW+LL RL    SL W+ GGDFNE+L  +E                               
Subjt:  VVLRSMSKFHIDA-VIKEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNE-------------------------------

Query:  --------------KHLDFHLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQ-EGVA----------NVWR---
                      KHLDF LSDH P+++  +   +  G G     FR E  W    D  +VV++ W   V     +   G+A           +W    
Subjt:  --------------KHLDFHLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQ-EGVA----------NVWR---

Query:  ---------------AQVHQEVVSGGEVSEARGRLER----LLGEEEIYWRQRSRVDWM
                       A ++      G + + R R+E+    LL  EE YW+QRSR DW+
Subjt:  ---------------AQVHQEVVSGGEVSEARGRLER----LLGEEEIYWRQRSRVDWM

XP_024164679.1 uncharacterized protein LOC112171781 [Rosa chinensis]2.8e-2034.45Show/hide
Query:  DSLEVVLRSMSKFHIDAVIKE--AKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLV------GGD--------FNELL-------SQNEKHLDF
        D + V L++ S+ HID VI E  +   WRFTG YG P+   R  +WNLL +L    +L W+V      GG+        F   L       +   KHLD 
Subjt:  DSLEVVLRSMSKFHIDAVIKE--AKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLV------GGD--------FNELL-------SQNEKHLDF

Query:  HLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQEGVANVWRAQVHQEVVSGGEVSE--ARGRLERLLGEEEIYW
          SDH PIL+E      +  R + K CF+FEE W   + C EVVERGW +   R+      +A  + A           V       +L  LL +E ++W
Subjt:  HLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQEGVANVWRAQVHQEVVSGGEVSE--ARGRLERLLGEEEIYW

Query:  RQRSRVDWM
        RQR++V W+
Subjt:  RQRSRVDWM

XP_038718167.1 uncharacterized protein LOC120011171 [Tripterygium wilfordii]2.6e-1829.3Show/hide
Query:  VVLRSMSKFHIDA-VIKEAKRH-WRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK-----------------------------
        V L S SK HID  V+ E   H W  TGFYG+P  S RCHSW+LL  L+ C  L WLV GDFNE+L   EK                             
Subjt:  VVLRSMSKFHIDA-VIKEAKRH-WRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK-----------------------------

Query:  --------------------------------------HLDFHLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGW----------
                                              H    +SDH PI+++   + V    GR    FRFEE+WT+ E    VV++GW          
Subjt:  --------------------------------------HLDFHLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGW----------

Query:  --GLPVQRSTGEQEGVANV------------WRAQVHQEVVSGGEVSEARGRLERLLGEEEIYWRQRSRVDWM
          GL    ++ ++    +V            W  Q         E++  +  +  LLG EE+ WRQRSRV+W+
Subjt:  --GLPVQRSTGEQEGVANV------------WRAQVHQEVVSGGEVSEARGRLERLLGEEEIYWRQRSRVDWM

XP_042988708.1 uncharacterized protein LOC122316242 [Carya illinoinensis]7.5e-1832.54Show/hide
Query:  LRSMSKFHIDAVI--KEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEKHLDFHLSDHCPILIEANSFRVQRGRGRDKYC
        ++S SK HIDA I  +EA R W FTG YG  E+  R  +WN++  L+  D   WL+ GDFNE+L   EK      SDH P++  ++S + +  RG+    
Subjt:  LRSMSKFHIDAVI--KEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEKHLDFHLSDHCPILIEANSFRVQRGRGRDKYC

Query:  FRFEEVWTQFEDCMEVVERGWGL-----PVQRSTGEQEGVA----------------NVWRAQVHQEVVSGGEV--------SEARGRLERLLGEEEIYW
        FRFE +W + EDC  V+   W       P+ R   + E  +                 + +A+ H + V   +          EAR  L+  L  EEI W
Subjt:  FRFEEVWTQFEDCMEVVERGWGL-----PVQRSTGEQEGVA----------------NVWRAQVHQEVVSGGEV--------SEARGRLERLLGEEEIYW

Query:  RQRSRVDWM
         QR++  W+
Subjt:  RQRSRVDWM

TrEMBL top hitse value%identityAlignment
A0A2N9F647 Uncharacterized protein2.4e-2536.19Show/hide
Query:  DSLEVVLRSMSKFHIDA-VIKEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK--------------------HLDFHL
        DS+++ ++S SK HID  V       WR TGFYGDP+ + R HSW LL RL+   +  WLV GDFNE+ S +EK                    H  F  
Subjt:  DSLEVVLRSMSKFHIDA-VIKEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK--------------------HLDFHL

Query:  SDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQEGVANVWRAQVHQEVVSGGEVSEARGR-----LERLLGEEEIY
        SDH  +L+  ++     G  R K  F FE  W + E C EV+ + W +   R   +          +++  V  G  V++  GR     L  LL +EEIY
Subjt:  SDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQEGVANVWRAQVHQEVVSGGEVSEARGR-----LERLLGEEEIY

Query:  WRQRSRVDWM
        WRQRSRV W+
Subjt:  WRQRSRVDWM

A0A2N9FYH3 CCHC-type domain-containing protein4.6e-2130.74Show/hide
Query:  DSLEVVLRSMSKFHIDA-VIKEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK--------------------------
        DS+++ ++S SK HID  V       WRFTGFYGDP+ + R HSW LL RL+   +  WLV GDFNE+ S +EK                          
Subjt:  DSLEVVLRSMSKFHIDA-VIKEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK--------------------------

Query:  -----------------HLDFHLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLP---------VQRSTGEQEGVANVWRAQV
                         H  F  SDH  +L+  ++     G  R K  F FE  W + E C EV+ + W +          VQ+    +  + +  ++Q 
Subjt:  -----------------HLDFHLSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLP---------VQRSTGEQEGVANVWRAQV

Query:  H-------------QEV--VSGGEVSEARGR-----LERLLGEEEIYWRQRSRVDWM
                      +E+   +G  V++  GR     L  LL +EEIYWRQRSRV W+
Subjt:  H-------------QEV--VSGGEVSEARGR-----LERLLGEEEIYWRQRSRVDWM

A0A2N9GZ45 Uncharacterized protein3.0e-2033.02Show/hide
Query:  DSLEVVLRSMSKFHIDA--VIKEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEKH--------------------LDFH
        D ++VV+ + S+ HIDA  V K +   +  TGF G+PE   R  SW LL  L S  S  W+  GDFNE+L  NE+                     ++F 
Subjt:  DSLEVVLRSMSKFHIDA--VIKEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEKH--------------------LDFH

Query:  LSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGW------GLPVQRSTGEQEGVAN---VWRAQVHQEVVSGGEVSEARGRLERLLG
        + DHCP+++     +  R R   K  FRF+ +WT  E+C EV+   W      G P+ +   + +G       W  ++ Q+             L  LL 
Subjt:  LSDHCPILIEANSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGW------GLPVQRSTGEQEGVAN---VWRAQVHQEVVSGGEVSEARGRLERLLG

Query:  EEEIYWRQRSRVDWM
        +EE+YWRQRSRV WM
Subjt:  EEEIYWRQRSRVDWM

A0A2N9IT86 Uncharacterized protein2.1e-2140.21Show/hide
Query:  EVVLR--SMSKFHIDAVIKEAKRH-WRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEKHLDFHLSDH-----CPILIEANSFRVQ
        EV LR  S S  HIDA++ E +   WRFTGFYG PE   R  SWNLL RL     L W   GDFNEL+   EKH   + S+        +L E     ++
Subjt:  EVVLR--SMSKFHIDAVIKEAKRH-WRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEKHLDFHLSDH-----CPILIEANSFRVQ

Query:  RGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQEGVANVWRAQVHQEVVSGGEVSEARGRLERLLGEEEIYWRQRSRVDWM
              K  FRFEEVWT  + C  V+E  W   V        GV        H+       VS+ RG L  LL +EE  WRQRSR +W+
Subjt:  RGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQEGVANVWRAQVHQEVVSGGEVSEARGRLERLLGEEEIYWRQRSRVDWM

A0A803Q6L7 Uncharacterized protein7.4e-1930.17Show/hide
Query:  SMSKFHIDAVI-KEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK----------------------------------
        S S FHID+ I KE  + WRFTGFYGDP+ + RC SW LL R+    S  W++GGDFNE+L + EK                                  
Subjt:  SMSKFHIDAVI-KEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEK----------------------------------

Query:  HLDFHLSDHCPILIEA---NSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQ--------EGVANVW-RAQVHQEVVSGGEVSEAR
        HL+   SDHCP+L++     +  V   R   +  F FE  W + E C ++V   W      +T  +            N W +A+  +  +   E+ +  
Subjt:  HLDFHLSDHCPILIEA---NSFRVQRGRGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQ--------EGVANVW-RAQVHQEVVSGGEVSEAR

Query:  GR---------------LER----LLGEEEIYWRQRSRVDWM
         R               LER    LL +EE +W+Q+SR  W+
Subjt:  GR---------------LER----LLGEEEIYWRQRSRVDWM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGCCGTTATGCTGCCGAAATTTTCGGTGCTCACGGATAGTTTGGAGGTGGTTCTGAGATCTATGAGCAAGTTCCATATTGATGCTGTGATAAAGGAAGCAAAGCG
GCATTGGAGATTTACGGGGTTCTATGGAGATCCGGAGGTGAGTAGTAGGTGTCACTCATGGAACTTGTTGTGGAGGCTTCGTAGTTGTGATTCCTTGTCGTGGTTGGTGG
GTGGTGATTTTAATGAGTTGCTTAGTCAGAATGAGAAGCATCTGGACTTTCATCTGTCTGATCATTGTCCTATTTTGATTGAGGCAAATAGTTTCAGGGTGCAGAGGGGA
AGAGGGAGAGATAAATACTGCTTCAGGTTTGAAGAGGTGTGGACTCAGTTTGAGGATTGCATGGAGGTGGTGGAAAGGGGATGGGGCCTGCCAGTTCAGAGGTCAACAGG
GGAGCAGGAGGGTGTAGCTAATGTTTGGAGGGCTCAAGTGCACCAGGAGGTGGTGAGCGGTGGGGAGGTGAGTGAAGCTAGAGGCCGTTTGGAGAGGTTGTTGGGAGAAG
AGGAGATCTACTGGAGACAGAGGTCCAGAGTAGACTGGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCGCCGTTATGCTGCCGAAATTTTCGGTGCTCACGGATAGTTTGGAGGTGGTTCTGAGATCTATGAGCAAGTTCCATATTGATGCTGTGATAAAGGAAGCAAAGCG
GCATTGGAGATTTACGGGGTTCTATGGAGATCCGGAGGTGAGTAGTAGGTGTCACTCATGGAACTTGTTGTGGAGGCTTCGTAGTTGTGATTCCTTGTCGTGGTTGGTGG
GTGGTGATTTTAATGAGTTGCTTAGTCAGAATGAGAAGCATCTGGACTTTCATCTGTCTGATCATTGTCCTATTTTGATTGAGGCAAATAGTTTCAGGGTGCAGAGGGGA
AGAGGGAGAGATAAATACTGCTTCAGGTTTGAAGAGGTGTGGACTCAGTTTGAGGATTGCATGGAGGTGGTGGAAAGGGGATGGGGCCTGCCAGTTCAGAGGTCAACAGG
GGAGCAGGAGGGTGTAGCTAATGTTTGGAGGGCTCAAGTGCACCAGGAGGTGGTGAGCGGTGGGGAGGTGAGTGAAGCTAGAGGCCGTTTGGAGAGGTTGTTGGGAGAAG
AGGAGATCTACTGGAGACAGAGGTCCAGAGTAGACTGGATGTAG
Protein sequenceShow/hide protein sequence
MCAVMLPKFSVLTDSLEVVLRSMSKFHIDAVIKEAKRHWRFTGFYGDPEVSSRCHSWNLLWRLRSCDSLSWLVGGDFNELLSQNEKHLDFHLSDHCPILIEANSFRVQRG
RGRDKYCFRFEEVWTQFEDCMEVVERGWGLPVQRSTGEQEGVANVWRAQVHQEVVSGGEVSEARGRLERLLGEEEIYWRQRSRVDWM