CuGenDBv2

Gene ID	Lag0005423
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Eukaryotic translation initiation factor 3 subunit I
Genome location	chr6:17405264..17405783
RNA-Seq Expression	Lag0005423
Synteny	Lag0005423
Gene Ontology terms	GO:0001732 - formation of cytoplasmic translation initiation complex (biological process) GO:0016282 - eukaryotic 43S preinitiation complex (cellular component) GO:0033290 - eukaryotic 48S preinitiation complex (cellular component) GO:0071541 - eukaryotic translation initiation factor 3 complex, eIF3m (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

CAF2143618.1 unnamed protein product [Brassica napus]

6.4e-19

65.52

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Query:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        +L   V  V ++  S   L   VVLGGGQDASAV  TDHR GKFEAKFY KILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

CAG7895406.1 unnamed protein product [Brassica rapa]

6.4e-19

65.52

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Query:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        +L   V  V ++  S   L   VVLGGGQDASAV  TDHR GKFEAKFY KILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

KAF2597520.1 hypothetical protein F2Q68_00011701 [Brassica cretica]

6.4e-19

65.52

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Query:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        +L   V  V ++  S   L   VVLGGGQDASAV  TDHR GKFEAKFY KILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

KZV44849.1 eukaryotic translation initiation factor 3 subunit I [Dorcoceras hygrometricum]

3.7e-19

81.54

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQDASAV  TDHR GKFEAKFYHKILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

KZV57115.1 eukaryotic translation initiation factor 3 subunit I [Dorcoceras hygrometricum]

3.7e-19

81.54

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQDASAV  TDHR GKFEAKFYHKILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

TrEMBL top hits

e value

%identity

Alignment

A0A0D3AW77 Eukaryotic translation initiation factor 3 subunit I

3.1e-19

65.52

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Query:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        +L   V  V ++  S   L   VVLGGGQDASAV  TDHR GKFEAKFY KILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

A0A2Z7CJJ3 Eukaryotic translation initiation factor 3 subunit I

1.8e-19

81.54

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQDASAV  TDHR GKFEAKFYHKILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

A0A2Z7DHG7 Eukaryotic translation initiation factor 3 subunit I

1.8e-19

81.54

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQDASAV  TDHR GKFEAKFYHKILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

A0A6J0JEC6 Eukaryotic translation initiation factor 3 subunit I

3.1e-19

65.52

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Query:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        +L   V  V ++  S   L   VVLGGGQDASAV  TDHR GKFEAKFY KILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

M4EW29 Eukaryotic translation initiation factor 3 subunit I

3.1e-19

65.52

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Query:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        +L   V  V ++  S   L   VVLGGGQDASAV  TDHR GKFEAKFY KILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  MLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

SwissProt top hits

e value

%identity

Alignment

A7RM20 Eukaryotic translation initiation factor 3 subunit I

3.2e-13

50.65

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY------EGNYDD
        VV+GGGQ+A  V  T  RVGKF+A+F+H + + +IG V  HF PIN+LAF+PDG+S+S  GE  Y      + +YDD
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY------EGNYDD

Q38884 Eukaryotic translation initiation factor 3 subunit I

5.4e-21

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQDASAV  TDHR GKFEAKFY KILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

Q5EBE8 Eukaryotic translation initiation factor 3 subunit I

4.2e-13

56.92

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQ+A  V  T  R+GKFEA+F+H   + + G V  HF PIN+LAF+PDGKS+S  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

Q66J51 Eukaryotic translation initiation factor 3 subunit I

4.2e-13

56.92

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQ+A  V  T  R+GKFEA+F+H   + + G V  HF PIN+LAF+PDGKS+S  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

Q759L2 Eukaryotic translation initiation factor 3 subunit I

8.4e-14

59.68

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGE
        V+LGGGQDA  V  T  R GKFEAKFYHK+ QV+IG V+DHF P+N +A +P G S++  GE
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGE

Arabidopsis top hits

e value

%identity

Alignment

AT2G46280.1 TGF-beta receptor interacting protein 1

3.9e-22

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQDASAV  TDHR GKFEAKFY KILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

AT2G46280.2 TGF-beta receptor interacting protein 1

3.9e-22

Show/hide

Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQDASAV  TDHR GKFEAKFY KILQ +IGGV  HF PINALAFNPDGKSFS  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

AT2G46290.1 Transducin/WD40 repeat-like superfamily protein

7.3e-21

76.92

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Query:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY
        VVLGGGQDASAV  TDHR GKFEAKFY  ILQ +IGGV  HF PINALAF+PDGKSFS  GE  Y
Subjt:  VVLGGGQDASAV-ITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDY

Sequences

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CDS sequence

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ATGCCCTTAAGTTCTAAGGATGAAGGTGTTGTGGGGGTAGACTCTTTAATGCTAGATTGTTTAGTTGATGATGTTAAAATATCTTTTGACTCATATCGGTCTCTTGGGTT
TGAAGTAGTACTTGGTGGTGGACAAGATGCTTCAGCAGTAATAACTGATCATCGGGTCGGAAAGTTTGAAGCTAAATTCTATCACAAGATCCTTCAAGTAGATATTGGAG
GTGTAAACGACCATTTTTTACCCATTAATGCTCTGGCTTTCAATCCTGATGGCAAGAGTTTTTCAATTAGAGGTGAGTTGGATTATGAAGGTAATTACGATGATTAA

mRNA sequence

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Protein sequence

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MPLSSKDEGVVGVDSLMLDCLVDDVKISFDSYRSLGFEVVLGGGQDASAVITDHRVGKFEAKFYHKILQVDIGGVNDHFLPINALAFNPDGKSFSIRGELDYEGNYDD

Lag0005423 (gene) of Sponge gourd (AG-4) v1 genome