| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 4.3e-60 | 46.29 | Show/hide |
Query: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
K+ S GG +D F+ + +++ + A + N +S + S+ + S F V T V+ILNN VPSKSVSETPFE+WR
Subjt: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
Query: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
RK YPKETRG FFDPQEN+ ++NH+ E STRVVD VG
Subjt: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
Query: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
TSG SHPSQ LR PRR GRV++QP+ YLGL ET +VIPDDGVEDPL+Y+QAM DVDK+QW+KAMDLE MESMYFN VW+LVD E
Subjt: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
Query: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
+KPIGCKWIYKRKRD+ GKVQTFKARLVAKGYTQR+
Subjt: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| KAA0050437.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-59 | 57.87 | Show/hide |
Query: VLTVVYILNNVPSKSVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG--------
V T V+ILNN VPSKSVSETPFE+WR ++TRG FFDPQEN+ ++NH+ E STRVVD VG
Subjt: VLTVVYILNNVPSKSVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG--------
Query: -TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEEL
TSG SHPSQ LR P+R GR+++QP+ YLGL ET +VIPDDGVEDPL+Y+QAM DVDK+QW+KAMDLE MESMYFN VW+LVD E +
Subjt: -TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEEL
Query: KPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
KPIGCKWIYKRKRD+ GKVQTFKARLVAKGYTQR+
Subjt: KPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 4.3e-60 | 46.29 | Show/hide |
Query: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
K+ S GG +D F+ + +++ + A + N +S + S+ + S F V T V+ILNN VPSKSVSETPFE+WR
Subjt: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
Query: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
RK YPKETRG FFDPQEN+ ++NH+ E STRVVD VG
Subjt: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
Query: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
TSG SHPSQ LR PRR GRV++QP+ YLGL ET +VIPDDGVEDPL+Y+QAM DVDK+QW+KAMDLE MESMYFN VW+LVD E
Subjt: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
Query: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
+KPIGCKWIYKRKRD+ GKVQTFKARLVAKGYTQR+
Subjt: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| TYJ98102.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-59 | 55.41 | Show/hide |
Query: TVVYILNNVPSKSVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENK-------------KLQNHQ------------QEVEQAGTSTRVVDRVGTSG
TV+YILNN VPSKSVS TP+E+W+ RK YPKE++ F+DPQENK ++NHQ ++ +ST++VD+ G
Subjt: TVVYILNNVPSKSVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENK-------------KLQNHQ------------QEVEQAGTSTRVVDRVGTSG
Query: PSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIG
+HPSQ+ REPRR GRV+ QPD YLGL+E IVIPDDG+EDPLTY+QAM D+D +QWIKAMDLE MESMY N VW LVDQ +KPIG
Subjt: PSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIG
Query: CKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
CKWIYKRKRD GKVQTFKARL+AKGYTQ++
Subjt: CKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 4.3e-60 | 46.29 | Show/hide |
Query: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
K+ S GG +D F+ + +++ + A + N +S + S+ + S F V T V+ILNN VPSKSVSETPFE+WR
Subjt: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
Query: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
RK YPKETRG FFDPQEN+ ++NH+ E STRVVD VG
Subjt: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
Query: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
TSG SHPSQ LR PRR GRV++QP+ YLGL ET +VIPDDGVEDPL+Y+QAM DVDK+QW+KAMDLE MESMYFN VW+LVD E
Subjt: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
Query: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
+KPIGCKWIYKRKRD+ GKVQTFKARLVAKGYTQR+
Subjt: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 2.1e-60 | 46.29 | Show/hide |
Query: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
K+ S GG +D F+ + +++ + A + N +S + S+ + S F V T V+ILNN VPSKSVSETPFE+WR
Subjt: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
Query: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
RK YPKETRG FFDPQEN+ ++NH+ E STRVVD VG
Subjt: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
Query: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
TSG SHPSQ LR PRR GRV++QP+ YLGL ET +VIPDDGVEDPL+Y+QAM DVDK+QW+KAMDLE MESMYFN VW+LVD E
Subjt: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
Query: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
+KPIGCKWIYKRKRD+ GKVQTFKARLVAKGYTQR+
Subjt: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| A0A5A7U7T0 Gag/pol protein | 1.4e-59 | 57.87 | Show/hide |
Query: VLTVVYILNNVPSKSVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG--------
V T V+ILNN VPSKSVSETPFE+WR ++TRG FFDPQEN+ ++NH+ E STRVVD VG
Subjt: VLTVVYILNNVPSKSVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG--------
Query: -TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEEL
TSG SHPSQ LR P+R GR+++QP+ YLGL ET +VIPDDGVEDPL+Y+QAM DVDK+QW+KAMDLE MESMYFN VW+LVD E +
Subjt: -TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEEL
Query: KPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
KPIGCKWIYKRKRD+ GKVQTFKARLVAKGYTQR+
Subjt: KPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| A0A5A7UYE8 Gag/pol protein | 2.1e-60 | 46.29 | Show/hide |
Query: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
K+ S GG +D F+ + +++ + A + N +S + S+ + S F V T V+ILNN VPSKSVSETPFE+WR
Subjt: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
Query: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
RK YPKETRG FFDPQEN+ ++NH+ E STRVVD VG
Subjt: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
Query: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
TSG SHPSQ LR PRR GRV++QP+ YLGL ET +VIPDDGVEDPL+Y+QAM DVDK+QW+KAMDLE MESMYFN VW+LVD E
Subjt: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
Query: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
+KPIGCKWIYKRKRD+ GKVQTFKARLVAKGYTQR+
Subjt: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| A0A5D3BEB1 Gag/pol protein | 1.4e-59 | 55.41 | Show/hide |
Query: TVVYILNNVPSKSVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENK-------------KLQNHQ------------QEVEQAGTSTRVVDRVGTSG
TV+YILNN VPSKSVS TP+E+W+ RK YPKE++ F+DPQENK ++NHQ ++ +ST++VD+ G
Subjt: TVVYILNNVPSKSVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENK-------------KLQNHQ------------QEVEQAGTSTRVVDRVGTSG
Query: PSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIG
+HPSQ+ REPRR GRV+ QPD YLGL+E IVIPDDG+EDPLTY+QAM D+D +QWIKAMDLE MESMY N VW LVDQ +KPIG
Subjt: PSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIG
Query: CKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
CKWIYKRKRD GKVQTFKARL+AKGYTQ++
Subjt: CKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| A0A5D3BUN8 Gag/pol protein | 2.1e-60 | 46.29 | Show/hide |
Query: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
K+ S GG +D F+ + +++ + A + N +S + S+ + S F V T V+ILNN VPSKSVSETPFE+WR
Subjt: KVNSSSTGGRVID-PFRSTLAPSTVEALICAQNWLRSNAIS-----------IDLQSHLEEVSRF--EEVLTVVYILNNVPSKSVPSKSVSETPFEMWRR
Query: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
RK YPKETRG FFDPQEN+ ++NH+ E STRVVD VG
Subjt: RK---------------------------------SYPKETRGEYFFDPQENK-------------KLQNHQQE-----VEQAGTSTRVVDRVG------
Query: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
TSG SHPSQ LR PRR GRV++QP+ YLGL ET +VIPDDGVEDPL+Y+QAM DVDK+QW+KAMDLE MESMYFN VW+LVD E
Subjt: ---TSGPSHPSQELREPRRGGRVITQPDCYLGLAETPIVIPDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLE
Query: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
+KPIGCKWIYKRKRD+ GKVQTFKARLVAKGYTQR+
Subjt: ELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-06 | 28.43 | Show/hide |
Query: SVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENKKLQNHQQEVEQAGTSTRVVDRVGTSGPSHPSQ--ELREP-RRGGRVITQPDCYLGLAETPIVI
++PS S + T E S E GE ++ ++L +EVE HP+Q E +P RR R + Y + ++I
Subjt: SVPSKSVSETPFEMWRRRKSYPKETRGEYFFDPQENKKLQNHQQEVEQAGTSTRVVDRVGTSGPSHPSQ--ELREP-RRGGRVITQPDCYLGLAETPIVI
Query: PDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
DD +P + ++ + +KNQ +KAM E MES+ N + LV+ + +P+ CKW++K K+D K+ +KARLV KG+ Q+K
Subjt: PDDGVEDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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| Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 2 | 1.1e-05 | 31.82 | Show/hide |
Query: TKVDVYLLECRVKGDDNFDILEWWKVN-----------------------------SSSTGGRVIDPFRSTLAPSTVEALICAQNWLR
++++ YL E FDIL WWK+N S+ TG R++D +RS+L P VEAL+CA++WL+
Subjt: TKVDVYLLECRVKGDDNFDILEWWKVN-----------------------------SSSTGGRVIDPFRSTLAPSTVEALICAQNWLR
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| Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 3 | 4.9e-06 | 30.34 | Show/hide |
Query: TKVDVYLLECRVKGDDNFDILEWWKVN------------------------------SSSTGGRVIDPFRSTLAPSTVEALICAQNWLR
++++ YL E + +F+ILEWWK+N +++TG +++D +RS+L P TVEAL CA++WL+
Subjt: TKVDVYLLECRVKGDDNFDILEWWKVN------------------------------SSSTGGRVIDPFRSTLAPSTVEALICAQNWLR
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.3e-06 | 33.33 | Show/hide |
Query: DPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQR
+P T QA++D +W AM E+ + N+ WDL + + +GC+WI+ +K ++ G + +KARLVAKGY QR
Subjt: DPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.7e-06 | 34.44 | Show/hide |
Query: DPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQR
+P T QAM+D ++W +AM E+ + N+ WDL + + +GC+WI+ +K ++ G + +KARLVAKGY QR
Subjt: DPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G42170.1 BED zinc finger ;hAT family dimerisation domain | 9.4e-05 | 30.85 | Show/hide |
Query: DVDTKVDVYLLECRVKGDDNFDILEWWKVNS--------------------------SSTGGRVIDPFRSTLAPSTVEALICAQNW-LRSNAIS
++ +++D YL E + FD+L+WWK N R +D ++++L P TVEALICA+ W L SNA S
Subjt: DVDTKVDVYLLECRVKGDDNFDILEWWKVNS--------------------------SSTGGRVIDPFRSTLAPSTVEALICAQNW-LRSNAIS
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 4.4e-10 | 33.08 | Show/hide |
Query: EDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRKAQLVAKGE
++P TY +A E + W AMD E + +M + W++ KPIGCKW+YK K ++ G ++ +KARLVAKGYTQ+ E
Subjt: EDPLTYRQAMEDVDKNQWIKAMDLEMESMYFNYVWDLKMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRKAQLVAKGE
Query: GLKFLNFQWKLVTATSVAFFFIVDSRRRNFLFH
G+ F+ + TSV + S NF H
Subjt: GLKFLNFQWKLVTATSVAFFFIVDSRRRNFLFH
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 6.1e-04 | 36.36 | Show/hide |
Query: KMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
+++++ N W LV +GCKW++K K + G + KARLVAKG+ Q +
Subjt: KMESMYFNYVWDLVDQLEELKPIGCKWIYKRKRDTVGKVQTFKARLVAKGYTQRK
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