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Lag0005436 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005436
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionkinetochore protein SPC24 homolog
Genome locationchr6:17645898..17647250
RNA-Seq ExpressionLag0005436
SyntenyLag0005436
Gene Ontology termsGO:0051983 - regulation of chromosome segregation (biological process)
InterPro domainsIPR013252 - Kinetochore-Ndc80 subunit Spc24
IPR044951 - Kinetochore protein SPC24-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603567.1 Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]6.3e-3880.58Show/hide
Query:  MVQLFFFTTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTI
        M+ L F  T++T+EIN+LDRQRISVQERKQAMKKLE+QELR QRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQ+FE DPT +S+FDICN IWN I
Subjt:  MVQLFFFTTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTI

Query:  NSP
        NSP
Subjt:  NSP

KAG7027420.1 hypothetical protein SDJN02_11433, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3790.32Show/hide
Query:  VTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP
        +  EINELDRQRISVQERKQA KKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTKMS+FDICNDIWN INSP
Subjt:  VTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP

XP_022931907.1 uncharacterized protein LOC111438184 [Cucurbita moschata]1.6e-3890.43Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP
        LV+N+INELDRQRISVQE+KQA KKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTKMS+FDICNDIWN INSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP

XP_022966574.1 uncharacterized protein LOC111466216 [Cucurbita maxima]1.3e-3891.49Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP
        LVTN+INELDRQRISVQERKQA KKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTK S+FDICNDIWN INSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP

XP_023518318.1 uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]2.5e-3992.55Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP
        LVTN+INELDRQRISVQERKQA KKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTKMS+FDICNDIWN INSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP

TrEMBL top hitse value%identityAlignment
A0A1S3CKZ4 uncharacterized protein LOC1035021539.7e-3786.17Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP
        LVTNEINEL+RQR+SVQERKQAMKKLE+QEL AQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFE DPTK+S+FD CN +WN INSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP

A0A6J1CQL9 uncharacterized protein LOC111013852 isoform X21.2e-3790.43Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP
        LVT+EINELD QRISVQERKQAMKKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTK SAFDICN IW+ INSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X11.2e-3790.43Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP
        LVT+EINELD QRISVQERKQAMKKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTK SAFDICN IW+ INSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP

A0A6J1F034 uncharacterized protein LOC1114381848.0e-3990.43Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP
        LV+N+INELDRQRISVQE+KQA KKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTKMS+FDICNDIWN INSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP

A0A6J1HU69 uncharacterized protein LOC1114662166.1e-3991.49Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP
        LVTN+INELDRQRISVQERKQA KKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTK S+FDICNDIWN INSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP

SwissProt top hitse value%identityAlignment
Q67XT3 Kinetochore protein SPC24 homolog2.5e-2150Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTIN
        LV +E+ +L+ Q  S+ E KQ+ K+  + +LRA++KLSMYASVT++IP++DD +KISG++VDR KR+++KF+ +  KM+A++ CN IW+ IN
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTIN

Arabidopsis top hitse value%identityAlignment
AT3G08880.1 unknown protein1.8e-2250Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTIN
        LV +E+ +L+ Q  S+ E KQ+ K+  + +LRA++KLSMYASVT++IP++DD +KISG++VDR KR+++KF+ +  KM+A++ CN IW+ IN
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTIN

AT5G01570.1 unknown protein6.3e-1242.17Show/hide
Query:  EINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTK-MSAFDICND
        ++ E  R     +E + A+K+ ++ +LR + KL MYASVT +IPN+DD  K SG++V R+KR++ KFE D  K  S ++ CN+
Subjt:  EINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTK-MSAFDICND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTGCCTGTCACATGTATGGTGCAACTGTTTTTCTTCACCACACTTGTCACCAATGAGATTAATGAGCTAGACCGACAGAGAATTTCTGTTCAAGAAAGGAAGCA
GGCGATGAAGAAACTTGAGAAACAAGAACTTAGGGCGCAGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCTGGCTAAAATTTCTG
GCCATATTGTGGATAGAAATAAACGGGTGGTACAGAAGTTTGAATTGGACCCGACTAAGATGTCTGCATTTGATATATGCAACGACATTTGGAATACGATTAATTCCCCA
TAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTTGCCTGTCACATGTATGGTGCAACTGTTTTTCTTCACCACACTTGTCACCAATGAGATTAATGAGCTAGACCGACAGAGAATTTCTGTTCAAGAAAGGAAGCA
GGCGATGAAGAAACTTGAGAAACAAGAACTTAGGGCGCAGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCTGGCTAAAATTTCTG
GCCATATTGTGGATAGAAATAAACGGGTGGTACAGAAGTTTGAATTGGACCCGACTAAGATGTCTGCATTTGATATATGCAACGACATTTGGAATACGATTAATTCCCCA
TAG
Protein sequenceShow/hide protein sequence
MYLPVTCMVQLFFFTTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDLAKISGHIVDRNKRVVQKFELDPTKMSAFDICNDIWNTINSP