; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005449 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005449
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr6:18002772..18006894
RNA-Seq ExpressionLag0005449
SyntenyLag0005449
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN73982.1 hypothetical protein VITISV_007640 [Vitis vinifera]5.3e-2433.33Show/hide
Query:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWG------QGDEILGQFNSFIKGNGIEKSEV-FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKS
        R +FW EL   +GL    WC+ GDFNV    L + WG      +G + + +   F+K    E +++ FG +  KK+ I+  +  +D +E+ G L + L  
Subjt:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWG------QGDEILGQFNSFIKGNGIEKSEV-FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKS

Query:  ECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS-------------------------------------------VYSRPF-----VDGLDWSPIS
        +    K E  ELI +E I WRQKA+VKWVK+ DCNS                                           +Y+ P      ++GLDWSPIS
Subjt:  ECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS-------------------------------------------VYSRPF-----VDGLDWSPIS

Query:  ERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC
        E       + F+ EEI K +F+ DR KA G DGF++AV  +DC
Subjt:  ERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC

CAN74944.1 hypothetical protein VITISV_000894 [Vitis vinifera]2.6e-2332.36Show/hide
Query:  VGLLCKSLMRVNASEG-HAYVYERNNR--RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWG-QGDEILGQFNSFIKGNGIEKSEV---------F
        +G + K +   + + G H  VY  NN   R EFW EL + FGL    WC+ GDFNV      +L G +    +  F+ FI+ + +    +          
Subjt:  VGLLCKSLMRVNASEG-HAYVYERNNR--RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWG-QGDEILGQFNSFIKGNGIEKSEV---------F

Query:  GDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS--------------------------------
         +   +K+ I   I  ID +E+ G L++ L ++    K E  ELI +E I W+QKAK+KWVK+ DCNS                                
Subjt:  GDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS--------------------------------

Query:  -----------VYSRPF-----VDGLDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC
                   +YS P      V+G+DWSPISE   S  DS F+  EI   +F+ DR KA G DGF++AV  +DC
Subjt:  -----------VYSRPF-----VDGLDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC

RVW46822.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.2e-2231.25Show/hide
Query:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWGQG-DEILGQFNSFIK--------------------------------------------GNGI
        R +FW EL + +GL    WC+ GDFNV      ++ G      +  F+SFI+                                            GNG 
Subjt:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWGQG-DEILGQFNSFIK--------------------------------------------GNGI

Query:  EKSEV------------------FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNSVYSRPFVD
        E  +                   FG++K KK+ I+  +   D +E+ G LN+ L S+  S K E  EL+ +  I WRQKAKVKWVK+ DCNS +     +
Subjt:  EKSEV------------------FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNSVYSRPFVD

Query:  G-----------------------LDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKE
        G                       LDWSPISE      DS F+ EEI K  F+ DR KA G DGF++AV +E
Subjt:  G-----------------------LDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKE

RVW79924.1 hypothetical protein CK203_041400 [Vitis vinifera]1.4e-2145.39Show/hide
Query:  FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS--------VYSRPF-----VDGLDWSPISER
        FG++  KK+ I+  +   D +E+VG L + L ++    K E  ELI +E I WRQKA+VKWVK+ DCNS        +Y+ P      V+GLDWSPISE 
Subjt:  FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS--------VYSRPF-----VDGLDWSPISER

Query:  DKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC
             DS F+ EEI K +F+ DR KA G DGF++AV  +DC
Subjt:  DKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC

TYK03178.1 hypothetical protein E5676_scaffold11G00830 [Cucumis melo var. makuwa]1.2e-2331.01Show/hide
Query:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGF-PLRRLWGQGDEILGQFNSFIKGNGI----------------------------EKSEVFGDIKVKKQEI
        R   W ELG+ +G CG    ++GDFNV  F   +   G+    +  FN FI  +G+                               +VFGDI++KK+E+
Subjt:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGF-PLRRLWGQGDEILGQFNSFIKGNGI----------------------------EKSEVFGDIKVKKQEI

Query:  MGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS------------------------------------------
        +  I  ID LE  G L++ALK E +S K + AE+I+KE++SW QK+K+KW K+ DCN+                                          
Subjt:  MGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS------------------------------------------

Query:  ------VYSRPFVDGLDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSM
              V+ +P ++G+DWSPI  R+      +F+L+E++KVVF  D  K  G DGFS+
Subjt:  ------VYSRPFVDGLDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSM

TrEMBL top hitse value%identityAlignment
A0A438EGN1 Transposon TX1 uncharacterized 149 kDa protein1.1e-2231.25Show/hide
Query:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWGQG-DEILGQFNSFIK--------------------------------------------GNGI
        R +FW EL + +GL    WC+ GDFNV      ++ G      +  F+SFI+                                            GNG 
Subjt:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWGQG-DEILGQFNSFIK--------------------------------------------GNGI

Query:  EKSEV------------------FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNSVYSRPFVD
        E  +                   FG++K KK+ I+  +   D +E+ G LN+ L S+  S K E  EL+ +  I WRQKAKVKWVK+ DCNS +     +
Subjt:  EKSEV------------------FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNSVYSRPFVD

Query:  G-----------------------LDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKE
        G                       LDWSPISE      DS F+ EEI K  F+ DR KA G DGF++AV +E
Subjt:  G-----------------------LDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKE

A0A438H5U3 Uncharacterized protein7.0e-2245.39Show/hide
Query:  FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS--------VYSRPF-----VDGLDWSPISER
        FG++  KK+ I+  +   D +E+VG L + L ++    K E  ELI +E I WRQKA+VKWVK+ DCNS        +Y+ P      V+GLDWSPISE 
Subjt:  FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS--------VYSRPF-----VDGLDWSPISER

Query:  DKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC
             DS F+ EEI K +F+ DR KA G DGF++AV  +DC
Subjt:  DKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC

A0A5D3BW32 Uncharacterized protein5.7e-2431.01Show/hide
Query:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGF-PLRRLWGQGDEILGQFNSFIKGNGI----------------------------EKSEVFGDIKVKKQEI
        R   W ELG+ +G CG    ++GDFNV  F   +   G+    +  FN FI  +G+                               +VFGDI++KK+E+
Subjt:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGF-PLRRLWGQGDEILGQFNSFIKGNGI----------------------------EKSEVFGDIKVKKQEI

Query:  MGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS------------------------------------------
        +  I  ID LE  G L++ALK E +S K + AE+I+KE++SW QK+K+KW K+ DCN+                                          
Subjt:  MGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS------------------------------------------

Query:  ------VYSRPFVDGLDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSM
              V+ +P ++G+DWSPI  R+      +F+L+E++KVVF  D  K  G DGFS+
Subjt:  ------VYSRPFVDGLDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSM

A5B034 Reverse transcriptase domain-containing protein2.6e-2433.33Show/hide
Query:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWG------QGDEILGQFNSFIKGNGIEKSEV-FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKS
        R +FW EL   +GL    WC+ GDFNV    L + WG      +G + + +   F+K    E +++ FG +  KK+ I+  +  +D +E+ G L + L  
Subjt:  RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWG------QGDEILGQFNSFIKGNGIEKSEV-FGDIKVKKQEIMGSIKAIDGLEEVGQLNTALKS

Query:  ECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS-------------------------------------------VYSRPF-----VDGLDWSPIS
        +    K E  ELI +E I WRQKA+VKWVK+ DCNS                                           +Y+ P      ++GLDWSPIS
Subjt:  ECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS-------------------------------------------VYSRPF-----VDGLDWSPIS

Query:  ERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC
        E       + F+ EEI K +F+ DR KA G DGF++AV  +DC
Subjt:  ERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC

A5BS85 Reverse transcriptase domain-containing protein1.3e-2332.36Show/hide
Query:  VGLLCKSLMRVNASEG-HAYVYERNNR--RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWG-QGDEILGQFNSFIKGNGIEKSEV---------F
        +G + K +   + + G H  VY  NN   R EFW EL + FGL    WC+ GDFNV      +L G +    +  F+ FI+ + +    +          
Subjt:  VGLLCKSLMRVNASEG-HAYVYERNNR--RTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWG-QGDEILGQFNSFIKGNGIEKSEV---------F

Query:  GDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS--------------------------------
         +   +K+ I   I  ID +E+ G L++ L ++    K E  ELI +E I W+QKAK+KWVK+ DCNS                                
Subjt:  GDIKVKKQEIMGSIKAIDGLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNS--------------------------------

Query:  -----------VYSRPF-----VDGLDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC
                   +YS P      V+G+DWSPISE   S  DS F+  EI   +F+ DR KA G DGF++AV  +DC
Subjt:  -----------VYSRPF-----VDGLDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACCGACCGGGAAATTATGAATCCCGACAAGGAAATTATGAATCCCGACCGGGAAATTATGAATCCCGATCGGGATTTCTTGGTCGGGAAACCGACCAAGAAATT
TTCCAGAAGACTCGAGAACAAGCGCTACAGTCCTCGAGTGAAACACAATCACACACAAGAGAAGAGAGAGAATCGGAGGATTAAACCTTTCCCTTCTGAGACCCAAATCG
CAAAACGCTGCTCCAGCCTCCCTCCTTTCACTTTCAACCTTTCAACCACCGACGCCGTTATTCCATCACCGCCGCTTGCAACTTTCCTTTCGTTCGTGAATCGCAGCGTA
GCAGCCAGCAAGGGAGTAGGTCTGTTATGCAAGTCTCTTATGCGAGTGAATGCAAGTGAGGGGCATGCCTATGTTTATGAGAGAAATAATAGAAGAACAGAGTTTTGGAA
TGAGTTGGGTGAACAATTTGGCCTTTGTGGGTCTTGTTGGTGCATTATGGGAGACTTCAATGTCACAGGTTTCCCTCTAAGAAGGCTTTGGGGGCAGGGTGACGAGATCT
TGGGACAGTTTAATAGCTTCATCAAGGGGAATGGAATAGAGAAGTCAGAAGTCTTTGGAGATATCAAGGTTAAGAAGCAAGAAATCATGGGTAGTATCAAAGCCATTGAT
GGCCTCGAAGAGGTGGGCCAACTGAACACCGCCTTGAAAAGTGAGTGTTTGTCTCTTAAAATCGAGTTTGCAGAGTTAATTCAGAAGGAGTCCATAAGTTGGAGACAAAA
AGCTAAAGTTAAGTGGGTGAAGGATGAGGATTGCAATTCAGTGTACTCCAGACCCTTCGTGGATGGTCTGGATTGGAGCCCCATATCTGAGAGGGATAAGTCCTTCTTTG
ATTCTGCTTTCTCCTTGGAGGAAATAAGAAAGGTTGTCTTTGAAAGTGATAGGATCAAAGCCCTTGGTTCTGATGGTTTCTCGATGGCGGTTGTTAAGGAGGATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATACCGACCGGGAAATTATGAATCCCGACAAGGAAATTATGAATCCCGACCGGGAAATTATGAATCCCGATCGGGATTTCTTGGTCGGGAAACCGACCAAGAAATT
TTCCAGAAGACTCGAGAACAAGCGCTACAGTCCTCGAGTGAAACACAATCACACACAAGAGAAGAGAGAGAATCGGAGGATTAAACCTTTCCCTTCTGAGACCCAAATCG
CAAAACGCTGCTCCAGCCTCCCTCCTTTCACTTTCAACCTTTCAACCACCGACGCCGTTATTCCATCACCGCCGCTTGCAACTTTCCTTTCGTTCGTGAATCGCAGCGTA
GCAGCCAGCAAGGGAGTAGGTCTGTTATGCAAGTCTCTTATGCGAGTGAATGCAAGTGAGGGGCATGCCTATGTTTATGAGAGAAATAATAGAAGAACAGAGTTTTGGAA
TGAGTTGGGTGAACAATTTGGCCTTTGTGGGTCTTGTTGGTGCATTATGGGAGACTTCAATGTCACAGGTTTCCCTCTAAGAAGGCTTTGGGGGCAGGGTGACGAGATCT
TGGGACAGTTTAATAGCTTCATCAAGGGGAATGGAATAGAGAAGTCAGAAGTCTTTGGAGATATCAAGGTTAAGAAGCAAGAAATCATGGGTAGTATCAAAGCCATTGAT
GGCCTCGAAGAGGTGGGCCAACTGAACACCGCCTTGAAAAGTGAGTGTTTGTCTCTTAAAATCGAGTTTGCAGAGTTAATTCAGAAGGAGTCCATAAGTTGGAGACAAAA
AGCTAAAGTTAAGTGGGTGAAGGATGAGGATTGCAATTCAGTGTACTCCAGACCCTTCGTGGATGGTCTGGATTGGAGCCCCATATCTGAGAGGGATAAGTCCTTCTTTG
ATTCTGCTTTCTCCTTGGAGGAAATAAGAAAGGTTGTCTTTGAAAGTGATAGGATCAAAGCCCTTGGTTCTGATGGTTTCTCGATGGCGGTTGTTAAGGAGGATTGTTAA
Protein sequenceShow/hide protein sequence
MNTDREIMNPDKEIMNPDREIMNPDRDFLVGKPTKKFSRRLENKRYSPRVKHNHTQEKRENRRIKPFPSETQIAKRCSSLPPFTFNLSTTDAVIPSPPLATFLSFVNRSV
AASKGVGLLCKSLMRVNASEGHAYVYERNNRRTEFWNELGEQFGLCGSCWCIMGDFNVTGFPLRRLWGQGDEILGQFNSFIKGNGIEKSEVFGDIKVKKQEIMGSIKAID
GLEEVGQLNTALKSECLSLKIEFAELIQKESISWRQKAKVKWVKDEDCNSVYSRPFVDGLDWSPISERDKSFFDSAFSLEEIRKVVFESDRIKALGSDGFSMAVVKEDC