; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005454 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005454
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr6:18160055..18163209
RNA-Seq ExpressionLag0005454
SyntenyLag0005454
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN83313.1 hypothetical protein VITISV_001463 [Vitis vinifera]7.8e-3944.33Show/hide
Query:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN
        G  GGILI+W       +E++ G FS+SI   L    S WLSA+YGP     R DFW EL+D+ GL   RW +G DFNV R + +K  G   T SM+ F+
Subjt:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN

Query:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSFLPFIG
         FI D +L+D+P ++  +TWS+    P    LDCFL +NE  Q F  +    L R TSDH+PI+L      WGP PFR EN WLQ  +F    G
Subjt:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSFLPFIG

RVW35116.1 hypothetical protein CK203_085887 [Vitis vinifera]6.0e-3946.03Show/hide
Query:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPT-RLPRVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN
        G  GGILI+W     + +E++ G FS+SI   L    S  LSA+YGP     R DFW EL+D+AGL   RW +G DFNV R + EK  G   T SM+ F+
Subjt:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPT-RLPRVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN

Query:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF
         FI+DY+L+D+P ++  +TWS+    P    LD FL +NE  Q F  +    L R TSDH+PI+L      WGP+PFR EN WLQ  SF
Subjt:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF

RVX11275.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]2.1e-3945.5Show/hide
Query:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN
        G  GGILI+W       +E++ G FS+SI   + +  S WLSA+YGP     R DFW EL+D+AGL   RW +G DFNV R + EK  G   T  M+ F+
Subjt:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN

Query:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF
        +FI D +L+D P ++  YTWS+    P    LD FL +NE  Q F  +    L R TSDH+PI+L      WGP+PFR EN WLQ  SF
Subjt:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF

RVX13544.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]7.8e-3945.5Show/hide
Query:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN
        G  GGILI+W     + +E++ G FS+SI   L    S WLSA+YGP     R D W EL+D+AGL   RW +G DFNV R + EK  G   T SM+ F+
Subjt:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN

Query:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF
         FI+D +L+D+P ++  +TWS+    P    LD FL +NE  Q F  +    L R TSDH+PI+L      WGP+PFR EN WLQ  SF
Subjt:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]3.9e-5450.72Show/hide
Query:  SLFSLQRLGPLLREYVGTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTW
        SL+S   +     +  G   GILILW+DPD    E+I+G FS++IN  L D F FW+S IYGP+       FW+EL DL+ L  + WIL  DFNVTRW+W
Subjt:  SLFSLQRLGPLLREYVGTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTW

Query:  EKSHGRSTTRSMRLFNKFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWL
        EKS+GR  T+SM LFN FI D  L+D+P  NG++TWS  T   S SL+DCFL+TN C+ K G     R+ R TSDHFPI+L  G   WG +PFR EN WL
Subjt:  EKSHGRSTTRSMRLFNKFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWL

Query:  QQQSFLPFI
          ++F PF+
Subjt:  QQQSFLPFI

TrEMBL top hitse value%identityAlignment
A0A438DID5 Uncharacterized protein2.9e-3946.03Show/hide
Query:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPT-RLPRVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN
        G  GGILI+W     + +E++ G FS+SI   L    S  LSA+YGP     R DFW EL+D+AGL   RW +G DFNV R + EK  G   T SM+ F+
Subjt:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPT-RLPRVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN

Query:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF
         FI+DY+L+D+P ++  +TWS+    P    LD FL +NE  Q F  +    L R TSDH+PI+L      WGP+PFR EN WLQ  SF
Subjt:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF

A0A438JQQ0 LINE-1 retrotransposable element ORF2 protein1.0e-3945.5Show/hide
Query:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN
        G  GGILI+W       +E++ G FS+SI   + +  S WLSA+YGP     R DFW EL+D+AGL   RW +G DFNV R + EK  G   T  M+ F+
Subjt:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN

Query:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF
        +FI D +L+D P ++  YTWS+    P    LD FL +NE  Q F  +    L R TSDH+PI+L      WGP+PFR EN WLQ  SF
Subjt:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF

A0A6J1E2G6 uncharacterized protein LOC1110254051.9e-5450.72Show/hide
Query:  SLFSLQRLGPLLREYVGTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTW
        SL+S   +     +  G   GILILW+DPD    E+I+G FS++IN  L D F FW+S IYGP+       FW+EL DL+ L  + WIL  DFNVTRW+W
Subjt:  SLFSLQRLGPLLREYVGTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTW

Query:  EKSHGRSTTRSMRLFNKFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWL
        EKS+GR  T+SM LFN FI D  L+D+P  NG++TWS  T   S SL+DCFL+TN C+ K G     R+ R TSDHFPI+L  G   WG +PFR EN WL
Subjt:  EKSHGRSTTRSMRLFNKFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWL

Query:  QQQSFLPFI
          ++F PF+
Subjt:  QQQSFLPFI

A5BJC9 Reverse transcriptase domain-containing protein3.8e-3944.33Show/hide
Query:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN
        G  GGILI+W       +E++ G FS+SI   L    S WLSA+YGP     R DFW EL+D+ GL   RW +G DFNV R + +K  G   T SM+ F+
Subjt:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN

Query:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSFLPFIG
         FI D +L+D+P ++  +TWS+    P    LDCFL +NE  Q F  +    L R TSDH+PI+L      WGP PFR EN WLQ  +F    G
Subjt:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSFLPFIG

A5CAA2 Reverse transcriptase domain-containing protein3.8e-3945.5Show/hide
Query:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN
        G  GGILI+W     + +E++ G FS+SI   L    S WLSA+YGP     R D W EL+D+AGL   RW +G DFNV R + EK  G   T SM+ F+
Subjt:  GTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLP-RVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTRSMRLFN

Query:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF
         FI+D +L+D+P ++  +TWS+    P    LD FL +NE  Q F  +    L R TSDH+PI+L      WGP+PFR EN WLQ  SF
Subjt:  KFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCGTTTATGCAAAATGAAAGACTGGAAATTGATTGGTGGTTTTAATGTAAAGTTCTATCCAATGAATCACACAAATTATGTCAACGAGAGGATGACAATATC
TTATGGAGGATGGATTTCGATTAAAGACCTACCCATTTTCCTTTGGACCAACGATATCTTTCGATACATAGGAAACTTAAGCGGTGGATATGACGAAACGGCTAGTCATA
CTGATCGATGGATCAATCTCCAAGAAGCACGAATCAAGCCGCCGCCAAACCCTAGTTCAGAGACCAATAAAGCCCAGCAGTCAAAGGGCCTTGTAATTTTTAAACAAGGT
TTGAAAGATACCACTTCCAATCAGCCCATAGCCCATGAAAATCTAGATACTGATGATTTTATTTCAAGCCCAGAAGCTGAACCTTCACCATCACCCCAATCCAGATTCAC
GCAGGCCAAATCACCAACCACTTTAACCTCCATGGATCTCACTCTCTTCGAAGAGCCACAGCCTTTATTAACAGCTTATGAAGAAAGCCCAAAAACTCTCGTTAAACCCA
CCACAATCCCAATACATACCTCTGATATTCCCACCCTAAACCTGAATTTAAGCCTCACGCCCAAAGAAAAACCCTATGCTCCCGAGAACACAGAAACTTTTAACCATGCT
ACAAGTCTTTTTTCCCTACAGCGTCTGGGCCCTCTTCTGCGAGAATATGTGGGGACAGTTGGTGGAATTCTTATTCTTTGGAGTGACCCAGACTACAACATCAAGGAGAT
AATTCAAGGTCAATTTTCTATCTCTATAAATGTATTCTTGGTTGATGACTTTTCTTTTTGGTTATCTGCAATTTATGGTCCAACTAGACTACCCCGTGTGGACTTTTGGA
GAGAACTGAATGATTTGGCTGGCTTGGGAGGTGATCGATGGATACTTGGCAGAGATTTTAATGTCACTAGATGGACTTGGGAGAAATCTCATGGAAGATCTACAACTCGA
AGTATGCGGCTTTTCAATAAATTTATTGCAGATTATCAGCTTATGGATATTCCTCCCCAAAATGGTCGTTATACTTGGTCCAGCTTCACTAATATACCATCATTGTCCCT
TCTTGACTGTTTCCTCATTACTAACGAATGCCTTCAAAAATTTGGCTCGGCTTGTTTATCGAGGCTAGACAGACCAACATCAGATCATTTTCCAATTATCTTATCTTTAG
GAGATATTGTCTGGGGTCCATCTCCCTTCAGGCTTGAAAACTCTTGGCTCCAACAACAATCATTCTTGCCTTTTATTGGTGGAACCAAAACTCTATCCAAGAGTGGCCTA
GTCATGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCGTTTATGCAAAATGAAAGACTGGAAATTGATTGGTGGTTTTAATGTAAAGTTCTATCCAATGAATCACACAAATTATGTCAACGAGAGGATGACAATATC
TTATGGAGGATGGATTTCGATTAAAGACCTACCCATTTTCCTTTGGACCAACGATATCTTTCGATACATAGGAAACTTAAGCGGTGGATATGACGAAACGGCTAGTCATA
CTGATCGATGGATCAATCTCCAAGAAGCACGAATCAAGCCGCCGCCAAACCCTAGTTCAGAGACCAATAAAGCCCAGCAGTCAAAGGGCCTTGTAATTTTTAAACAAGGT
TTGAAAGATACCACTTCCAATCAGCCCATAGCCCATGAAAATCTAGATACTGATGATTTTATTTCAAGCCCAGAAGCTGAACCTTCACCATCACCCCAATCCAGATTCAC
GCAGGCCAAATCACCAACCACTTTAACCTCCATGGATCTCACTCTCTTCGAAGAGCCACAGCCTTTATTAACAGCTTATGAAGAAAGCCCAAAAACTCTCGTTAAACCCA
CCACAATCCCAATACATACCTCTGATATTCCCACCCTAAACCTGAATTTAAGCCTCACGCCCAAAGAAAAACCCTATGCTCCCGAGAACACAGAAACTTTTAACCATGCT
ACAAGTCTTTTTTCCCTACAGCGTCTGGGCCCTCTTCTGCGAGAATATGTGGGGACAGTTGGTGGAATTCTTATTCTTTGGAGTGACCCAGACTACAACATCAAGGAGAT
AATTCAAGGTCAATTTTCTATCTCTATAAATGTATTCTTGGTTGATGACTTTTCTTTTTGGTTATCTGCAATTTATGGTCCAACTAGACTACCCCGTGTGGACTTTTGGA
GAGAACTGAATGATTTGGCTGGCTTGGGAGGTGATCGATGGATACTTGGCAGAGATTTTAATGTCACTAGATGGACTTGGGAGAAATCTCATGGAAGATCTACAACTCGA
AGTATGCGGCTTTTCAATAAATTTATTGCAGATTATCAGCTTATGGATATTCCTCCCCAAAATGGTCGTTATACTTGGTCCAGCTTCACTAATATACCATCATTGTCCCT
TCTTGACTGTTTCCTCATTACTAACGAATGCCTTCAAAAATTTGGCTCGGCTTGTTTATCGAGGCTAGACAGACCAACATCAGATCATTTTCCAATTATCTTATCTTTAG
GAGATATTGTCTGGGGTCCATCTCCCTTCAGGCTTGAAAACTCTTGGCTCCAACAACAATCATTCTTGCCTTTTATTGGTGGAACCAAAACTCTATCCAAGAGTGGCCTA
GTCATGGATTAA
Protein sequenceShow/hide protein sequence
MATRLCKMKDWKLIGGFNVKFYPMNHTNYVNERMTISYGGWISIKDLPIFLWTNDIFRYIGNLSGGYDETASHTDRWINLQEARIKPPPNPSSETNKAQQSKGLVIFKQG
LKDTTSNQPIAHENLDTDDFISSPEAEPSPSPQSRFTQAKSPTTLTSMDLTLFEEPQPLLTAYEESPKTLVKPTTIPIHTSDIPTLNLNLSLTPKEKPYAPENTETFNHA
TSLFSLQRLGPLLREYVGTVGGILILWSDPDYNIKEIIQGQFSISINVFLVDDFSFWLSAIYGPTRLPRVDFWRELNDLAGLGGDRWILGRDFNVTRWTWEKSHGRSTTR
SMRLFNKFIADYQLMDIPPQNGRYTWSSFTNIPSLSLLDCFLITNECLQKFGSACLSRLDRPTSDHFPIILSLGDIVWGPSPFRLENSWLQQQSFLPFIGGTKTLSKSGL
VMD