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Lag0005470 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005470
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr6:18734732..18736397
RNA-Seq ExpressionLag0005470
SyntenyLag0005470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024019127.1 uncharacterized protein LOC112090925 [Morus notabilis]2.9e-1142.86Show/hide
Query:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWG
        +LQL+ELEE R FSYENAK+YKEKTK WHDK+IK +EF  GQ                                     ++EK GR F VNGQRVKHYWG
Subjt:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWG

Query:  EEFQSKYPSLRI
           +    S+ +
Subjt:  EEFQSKYPSLRI

XP_024028687.1 uncharacterized protein LOC112093776 [Morus notabilis]2.2e-1141.96Show/hide
Query:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWG
        +LQL+ELEE R FSYENAK+YKEKTK WHDK+IK +EF  GQ                                     ++EK GR F VNGQR+KHYWG
Subjt:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWG

Query:  EEFQSKYPSLRI
           +    S+ +
Subjt:  EEFQSKYPSLRI

XP_030478276.1 uncharacterized protein LOC115695343 [Cannabis sativa]2.4e-1043.36Show/hide
Query:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEF-------------------VKGQ------------------KDEKYGRVFKVNGQRVKHYWG
        MLQLNELEE R FSYENAK+YKEKTK WHDK+I+ + F                   +K Q                  K+E++GRVFKVNGQR+KHY G
Subjt:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEF-------------------VKGQ------------------KDEKYGRVFKVNGQRVKHYWG

Query:  EEFQSKYPSLRIQ
         E      S+ ++
Subjt:  EEFQSKYPSLRIQ

XP_030505229.1 uncharacterized protein LOC115720213 [Cannabis sativa]8.3e-1142.11Show/hide
Query:  LQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWGE
        LQLNEL+E R F+YENAK+YKEK K WHD +IK + FVK Q                                     KDEK  R FKVNGQR+K+YWGE
Subjt:  LQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWGE

Query:  EFQSKYPSLRIQQV
        E   +  S+ ++ V
Subjt:  EFQSKYPSLRIQQV

XP_030505514.1 uncharacterized protein LOC115720505 [Cannabis sativa]8.3e-1141.07Show/hide
Query:  LQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWGE
        L+LNEL+E R F+Y+NAK+YKEK K WHD +IK + FVK Q                                     KDEK GR FKVNGQ +KHYWGE
Subjt:  LQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWGE

Query:  EFQSKYPSLRIQ
        E   +  S+ ++
Subjt:  EFQSKYPSLRIQ

TrEMBL top hitse value%identityAlignment
A0A1S3YWB0 uncharacterized protein LOC1077802962.2e-0943.43Show/hide
Query:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-----------------------KDEKYGRVFKVNGQRVKHYWGEEFQSKYPSLRIQ
        +LQL+ELEEFR  +YENAK+YKEKTK W+DK I+ +EF  GQ                       +D      F VNGQR+KHYWG +F     SL ++
Subjt:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-----------------------KDEKYGRVFKVNGQRVKHYWGEEFQSKYPSLRIQ

A0A2P5CF10 Uncharacterized protein (Fragment)2.6e-1037.72Show/hide
Query:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK-------------------------------------DEKYGRVFKVNGQRVKHYWG
        +LQLNEL+E R F+Y+NAK+YKE+TK WHD KI+ + +  GQ+                                     +E  GR FKVNGQR+KH+WG
Subjt:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK-------------------------------------DEKYGRVFKVNGQRVKHYWG

Query:  EEFQSKYPSLRIQQ
         EF     S+ +Q+
Subjt:  EEFQSKYPSLRIQQ

A0A3Q7XQS1 LOW QUALITY PROTEIN: uncharacterized protein LOC1137841291.7e-0946.08Show/hide
Query:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWG
        +LQLNELEEFR F+YENAK+YKEKTK WHDKKIK KEF +G+                                     KD      FKVNGQR+K Y+G
Subjt:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ-------------------------------------KDEKYGRVFKVNGQRVKHYWG

Query:  EE
        EE
Subjt:  EE

A0A5B6VWJ0 Retroelement pol polyprotein-like1.5e-1062.5Show/hide
Query:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKYGRVFKVNGQRVKHYWGE
        MLQLNELEEFR FSYENAK+ KE+ K WHDK I+ +EF  G+     G  F+VN QR+KHY+GE
Subjt:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKYGRVFKVNGQRVKHYWGE

A0A6P5NKK9 uncharacterized protein LOC1102804914.4e-1060Show/hide
Query:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKYGRVFKVNGQRVKHYWGEE
        MLQLNEL+EFR  +YEN+K YKE+TKL HDKKI  + F  GQ++E   R F + GQR+KHY G E
Subjt:  MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKYGRVFKVNGQRVKHYWGEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACAGCTTAATGAATTAGAGGAATTTCGCCAATTTTCTTATGAGAATGCGAAAATGTATAAAGAAAAGACTAAGCTGTGGCATGACAAGAAAATAAAATCTAAAGA
GTTTGTCAAGGGTCAGAAAGATGAAAAATATGGGAGAGTGTTCAAGGTGAATGGACAGCGTGTGAAGCATTATTGGGGAGAGGAGTTTCAGTCGAAATATCCTTCCCTAA
GGATTCAGCAGGTTGTTGCAGCAAAAGTTATGGTGGAGCAAATCGTCCAAATAGGAAGGGCAGAGGATGAGATTGAAAGAGAACCAGTTCAGGAGGCTCGTATTGAGGTT
ATCATGCCTGAACCTCTGAAACGTCGCCGCATTAAGCGGAAGGCTGGGAGTGTTTCGGTGATCAGGACTGATACCCCATCGCCTTCATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTACAGCTTAATGAATTAGAGGAATTTCGCCAATTTTCTTATGAGAATGCGAAAATGTATAAAGAAAAGACTAAGCTGTGGCATGACAAGAAAATAAAATCTAAAGA
GTTTGTCAAGGGTCAGAAAGATGAAAAATATGGGAGAGTGTTCAAGGTGAATGGACAGCGTGTGAAGCATTATTGGGGAGAGGAGTTTCAGTCGAAATATCCTTCCCTAA
GGATTCAGCAGGTTGTTGCAGCAAAAGTTATGGTGGAGCAAATCGTCCAAATAGGAAGGGCAGAGGATGAGATTGAAAGAGAACCAGTTCAGGAGGCTCGTATTGAGGTT
ATCATGCCTGAACCTCTGAAACGTCGCCGCATTAAGCGGAAGGCTGGGAGTGTTTCGGTGATCAGGACTGATACCCCATCGCCTTCATCGTGA
Protein sequenceShow/hide protein sequence
MLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKYGRVFKVNGQRVKHYWGEEFQSKYPSLRIQQVVAAKVMVEQIVQIGRAEDEIEREPVQEARIEV
IMPEPLKRRRIKRKAGSVSVIRTDTPSPSS