CuGenDBv2

Gene ID	Lag0005472
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ubiquitin carboxyl-terminal hydrolase 18-like
Genome location	chr6:19014029..19016977
RNA-Seq Expression	Lag0005472
Synteny	Lag0005472
Gene Ontology terms	GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0016579 - protein deubiquitination (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004197 - cysteine-type endopeptidase activity (molecular function) GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591506.1 Ubiquitin carboxyl-terminal hydrolase 19, partial [Cucurbita argyrosperma subsp. sororia]

6.8e-29

78.95

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV
        MHVSGVTLDLN FLQLILTVF I+F LL+L+KNTASKY EV ANFEAS GGG  GK G  GGDCNSMSGGGST D VCVVCG+LG+KKCSRCK +
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV

KAG7024392.1 Ubiquitin carboxyl-terminal hydrolase 19 [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-29

78.95

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV
        MHVSGVTLDLN FLQLILTVF I+F LL+L+KNTASKY EV ANFEAS GGG  GK G  GGDCNSMSGGGST D VCVVCG+LG+KKCSRCK +
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV

XP_022936317.1 ubiquitin carboxyl-terminal hydrolase 18-like [Cucurbita moschata]

6.8e-29

78.95

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV
        MHVSGVTLDLN FLQLILTVF I+F LL+L+KNTASKY EV ANFEAS GGG  GK G  GGDCNSMSGGGST D VCVVCG+LG+KKCSRCK +
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV

XP_022976989.1 ubiquitin carboxyl-terminal hydrolase 18-like [Cucurbita maxima]

4.4e-28

77.89

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV
        MHVSGVTLDLN FLQLILTVF I+  LL+L+KNTASKY EV ANFEAS GGG  GK G  GGDCNSMSGGGST D VCVVCG+LG+KKCSRCK +
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV

XP_023535670.1 ubiquitin carboxyl-terminal hydrolase 18-like [Cucurbita pepo subsp. pepo]

1.3e-27

77.89

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV
        M VSGVTLDLN FLQLILTVF I+F LL+L+KNTASKY EV ANFEAS GGG  GK G  GGDCNSMSGGGST D VCVVCG+LG+KKCSRCK +
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VC67 Ubiquitin carboxyl-terminal hydrolase 18-like

4.9e-25

74.49

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMS---GGGSTSDVVCVVCGSLGSKKCSRCKVV
        MHVSGVTLDLN FLQLILT+FFI+F LL+L+KNTASKY EV ANFEAS GG T G+    G DCNSMS   GGGS +D VCVVCG+LGSKKCSRCK V
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMS---GGGSTSDVVCVVCGSLGSKKCSRCKVV

A0A6J1F840 ubiquitin carboxyl-terminal hydrolase 18-like

3.3e-29

78.95

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV
        MHVSGVTLDLN FLQLILTVF I+F LL+L+KNTASKY EV ANFEAS GGG  GK G  GGDCNSMSGGGST D VCVVCG+LG+KKCSRCK +
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV

A0A6J1FML7 ubiquitin carboxyl-terminal hydrolase 19-like

1.3e-25

77.08

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGG-GSTSDVVCVVCGSLGSKKCSRCKVV
        MHVSGVTLDLN FLQLILTVFFI+F LL+L+KNTASKY EV ANFEAS GGGT GK     GDCNSMSGG  S +D VCVVCG+ GSKKCSRCK V
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGG-GSTSDVVCVVCGSLGSKKCSRCKVV

A0A6J1IQ77 ubiquitin carboxyl-terminal hydrolase 18-like

2.1e-28

77.89

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV
        MHVSGVTLDLN FLQLILTVF I+  LL+L+KNTASKY EV ANFEAS GGG  GK G  GGDCNSMSGGGST D VCVVCG+LG+KKCSRCK +
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV

A0A6J1J3L7 ubiquitin carboxyl-terminal hydrolase 18-like

3.4e-26

77.08

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGG-GSTSDVVCVVCGSLGSKKCSRCKVV
        MHVSG TLDLN FLQLILTVFFI+F LLHL+KNTASKY EV ANFEAS GGGT GK     GDCNSMSGG  S  D VCVVCG++GSKKCSRCK V
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEV-ANFEASDGGGTTGKVGRGGGDCNSMSGG-GSTSDVVCVVCGSLGSKKCSRCKVV

SwissProt top hits

e value

%identity

Alignment

Q67XW5 Ubiquitin carboxyl-terminal hydrolase 18

8.3e-06

38.3

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEVANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV
        MH  G  LDL++F +LI T+FF+   + + LKNTA+KY ++            G    GG D + M+         C VCG+  +KKCSRCK V
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEVANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV

Q9SJA1 Ubiquitin carboxyl-terminal hydrolase 19

3.4e-07

41.35

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEVANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVVEINAIA
        MH  G+ +DLN F QLILT+FF+   LL+ +K TA+KY EV       GGG+      GG D +       +    C VCG   +KKCSRCK V   + A
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEVANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVVEINAIA

Query:  VPSS
          +S
Subjt:  VPSS

Arabidopsis top hits

e value

%identity

Alignment

AT2G24640.1 ubiquitin-specific protease 19

2.4e-08

41.35

Show/hide

Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEVANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVVEINAIA
        MH  G+ +DLN F QLILT+FF+   LL+ +K TA+KY EV       GGG+      GG D +       +    C VCG   +KKCSRCK V   + A
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEVANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVVEINAIA

Query:  VPSS
          +S
Subjt:  VPSS

AT4G31670.1 ubiquitin-specific protease 18

5.9e-07

38.3

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Query:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEVANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV
        MH  G  LDL++F +LI T+FF+   + + LKNTA+KY ++            G    GG D + M+         C VCG+  +KKCSRCK V
Subjt:  MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEVANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVV

Sequences

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CDS sequence

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ATGCACGTCTCTGGAGTAACGTTGGATCTCAATTTGTTCCTGCAATTGATTTTGACTGTGTTTTTTATTGTCTTCAGATTGCTGCACTTGTTGAAGAATACAGCCTCTAA
ATACCTTGAGGTCGCGAATTTTGAGGCTTCCGACGGCGGAGGAACGACGGGAAAAGTCGGAAGAGGCGGCGGCGACTGCAACTCAATGTCTGGCGGCGGTTCTACGAGCG
ATGTCGTGTGCGTCGTTTGTGGCAGTTTGGGCTCAAAGAAGTGCTCGCGATGTAAGGTTGTTGAAATCAATGCAATTGCAGTGCCAAGTTCCAGTTGCTATGTTTTTGAC
AACTCTAGTAATATTAAATGGTTAAGGGTCAGTTCTGCAATGTTTACTGCCTTTCATTACATCGTTGCAAGTTCTTGCTCTGAGAGGACTTAG

mRNA sequence

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Protein sequence

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MHVSGVTLDLNLFLQLILTVFFIVFRLLHLLKNTASKYLEVANFEASDGGGTTGKVGRGGGDCNSMSGGGSTSDVVCVVCGSLGSKKCSRCKVVEINAIAVPSSSCYVFD
NSSNIKWLRVSSAMFTAFHYIVASSCSERT

Lag0005472 (gene) of Sponge gourd (AG-4) v1 genome