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Lag0005473 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005473
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranspos_assoc domain-containing protein
Genome locationchr6:19017902..19018501
RNA-Seq ExpressionLag0005473
SyntenyLag0005473
Gene Ontology termsNA
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050152.1 uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa]1.2e-3746.49Show/hide
Query:  MNKVWIKIRDKLSTENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEPSGVN------------------------------
        MNK WIK+++KLS E + GV+QFLE+AKLH+ + G+TR PCKKCMN++W SL G+ERHLL   + PS VN                              
Subjt:  MNKVWIKIRDKLSTENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEPSGVN------------------------------

Query:  --EEANMFDLLDDLQPPIFYADVDGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
          E+  M DLL+DLQ PI   +   +  ENE   +    +T+S FEDLM++ARN LYPGC++FSSL+F+VKLM  KV+NGWS  +
Subjt:  --EEANMFDLLDDLQPPIFYADVDGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

KAA0056368.1 uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa]1.4e-3040.41Show/hide
Query:  MNKVWIKIRDKLSTENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEP----------------------------------
        M+K W+K+R+KLS E + GV QFLE AK H+   G+ R PCK+C+N  W SL G+ERHLL   + P                                  
Subjt:  MNKVWIKIRDKLSTENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEP----------------------------------

Query:  -SGVNEEANMFDLLDDLQPPIFY-ADVDGQCVENERSTNSHVN----ETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
         +  NEE ++F +L+DLQ PI +  +++   +E+E + N  VN     T++ F+DL+++ARN LYPGC+ FSSL+F+VKLMH KV+NGWS  +
Subjt:  -SGVNEEANMFDLLDDLQPPIFY-ADVDGQCVENERSTNSHVN----ETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

TYK18968.1 uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa]3.1e-2539.43Show/hide
Query:  GVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEP-----------------------------------SGVNEEANMFDLLDDLQ
        GV QFLE AK H+   G+ R PCK+C+N  W SL G+ERHLL   + P                                   +  NEE ++F +L+DLQ
Subjt:  GVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEP-----------------------------------SGVNEEANMFDLLDDLQ

Query:  PPIFY-ADVDGQCVENERSTNSHVN----ETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
         PI +  +++   +E+E + N  VN     T++ F+DL+++ARN LYPGC+ FSSL+F+VKLMH KV+NGWS  +
Subjt:  PPIFY-ADVDGQCVENERSTNSHVN----ETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

XP_008455800.1 PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo]1.9e-1937.95Show/hide
Query:  LEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLL--------------------------MSTVEPSGVNEEAN-------MFDLLDDLQPPIFYAD
        LE+AK H+ ++GKTR PCK C N++ ++L  +ERHL                            S+ E   ++ E+N       + DLL DLQ  +   +
Subjt:  LEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLL--------------------------MSTVEPSGVNEEAN-------MFDLLDDLQPPIFYAD

Query:  V---DGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
            DG   ++E   +     TS+ FE+LM++ARNPLYPGCT+FSSL+F+VKLMH KV+N WS  +
Subjt:  V---DGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

XP_042961531.1 uncharacterized protein LOC122296147 [Carya illinoinensis]4.8e-1834.78Show/hide
Query:  MNKVWIKIRDKL-STENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEPSGV-----NEEANMF------DLLDDLQPPIFY
        M+K W+ I D+L STE   GV QFL +A+ H +   + R PCK+C N  + S+  +E HL +  ++P+        EE  +       D+ DD  P   Y
Subjt:  MNKVWIKIRDKL-STENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEPSGV-----NEEANMF------DLLDDLQPPIFY

Query:  A-DVD--------GQCVENERSTNSHVNE----------TSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
          DVD        G  ++N  S + + +           T+  FE+L++ AR PLYPGC +FS L F+VKL+H K I GW+  +
Subjt:  A-DVD--------GQCVENERSTNSHVNE----------TSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

TrEMBL top hitse value%identityAlignment
A0A1S3C1V3 uncharacterized protein LOC1034958959.3e-2037.95Show/hide
Query:  LEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLL--------------------------MSTVEPSGVNEEAN-------MFDLLDDLQPPIFYAD
        LE+AK H+ ++GKTR PCK C N++ ++L  +ERHL                            S+ E   ++ E+N       + DLL DLQ  +   +
Subjt:  LEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLL--------------------------MSTVEPSGVNEEAN-------MFDLLDDLQPPIFYAD

Query:  V---DGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
            DG   ++E   +     TS+ FE+LM++ARNPLYPGCT+FSSL+F+VKLMH KV+N WS  +
Subjt:  V---DGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

A0A5A7SP00 CACTA transposable element9.3e-2037.95Show/hide
Query:  LEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLL--------------------------MSTVEPSGVNEEAN-------MFDLLDDLQPPIFYAD
        LE+AK H+ ++GKTR PCK C N++ ++L  +ERHL                            S+ E   ++ E+N       + DLL DLQ  +   +
Subjt:  LEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLL--------------------------MSTVEPSGVNEEAN-------MFDLLDDLQPPIFYAD

Query:  V---DGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
            DG   ++E   +     TS+ FE+LM++ARNPLYPGCT+FSSL+F+VKLMH KV+N WS  +
Subjt:  V---DGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

A0A5A7UMP4 Uncharacterized protein6.9e-3140.41Show/hide
Query:  MNKVWIKIRDKLSTENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEP----------------------------------
        M+K W+K+R+KLS E + GV QFLE AK H+   G+ R PCK+C+N  W SL G+ERHLL   + P                                  
Subjt:  MNKVWIKIRDKLSTENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEP----------------------------------

Query:  -SGVNEEANMFDLLDDLQPPIFY-ADVDGQCVENERSTNSHVN----ETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
         +  NEE ++F +L+DLQ PI +  +++   +E+E + N  VN     T++ F+DL+++ARN LYPGC+ FSSL+F+VKLMH KV+NGWS  +
Subjt:  -SGVNEEANMFDLLDDLQPPIFY-ADVDGQCVENERSTNSHVN----ETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

A0A5D3C5I5 Phytocyanin domain-containing protein5.8e-3846.49Show/hide
Query:  MNKVWIKIRDKLSTENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEPSGVN------------------------------
        MNK WIK+++KLS E + GV+QFLE+AKLH+ + G+TR PCKKCMN++W SL G+ERHLL   + PS VN                              
Subjt:  MNKVWIKIRDKLSTENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEPSGVN------------------------------

Query:  --EEANMFDLLDDLQPPIFYADVDGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
          E+  M DLL+DLQ PI   +   +  ENE   +    +T+S FEDLM++ARN LYPGC++FSSL+F+VKLM  KV+NGWS  +
Subjt:  --EEANMFDLLDDLQPPIFYADVDGQCVENERSTNSHVNETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

A0A5D3D5X7 Transpos_assoc domain-containing protein1.5e-2539.43Show/hide
Query:  GVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEP-----------------------------------SGVNEEANMFDLLDDLQ
        GV QFLE AK H+   G+ R PCK+C+N  W SL G+ERHLL   + P                                   +  NEE ++F +L+DLQ
Subjt:  GVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEP-----------------------------------SGVNEEANMFDLLDDLQ

Query:  PPIFY-ADVDGQCVENERSTNSHVN----ETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT
         PI +  +++   +E+E + N  VN     T++ F+DL+++ARN LYPGC+ FSSL+F+VKLMH KV+NGWS  +
Subjt:  PPIFY-ADVDGQCVENERSTNSHVN----ETSSRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAGGTGTGGATTAAAATTCGAGATAAGCTTTCAACGGAGAATAAGGTTGGGGTTGCTCAGTTCCTAGAGATAGCAAAGCTACACATTACCAATCTAGGAAAAAC
ACGACGCCCATGCAAGAAATGTATGAATGCAGTATGGCGGTCATTACACGGGATGGAACGACATCTACTCATGAGTACTGTTGAGCCAAGTGGTGTAAACGAGGAAGCCA
ATATGTTCGACCTCTTAGATGATCTACAACCCCCAATTTTTTATGCAGACGTAGATGGGCAATGCGTCGAGAATGAGAGGTCCACTAATTCCCACGTGAATGAGACATCG
AGTCGATTTGAGGACTTAATGTCTAAGGCCCGTAATCCATTATATCCTGGTTGTACACGATTTTCTTCATTACACTTTATGGTCAAGTTGATGCATGCTAAAGTTATCAA
CGGTTGGAGTACCAACACTACTACAAATTTAACCTTTGTTGATGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAAGGTGTGGATTAAAATTCGAGATAAGCTTTCAACGGAGAATAAGGTTGGGGTTGCTCAGTTCCTAGAGATAGCAAAGCTACACATTACCAATCTAGGAAAAAC
ACGACGCCCATGCAAGAAATGTATGAATGCAGTATGGCGGTCATTACACGGGATGGAACGACATCTACTCATGAGTACTGTTGAGCCAAGTGGTGTAAACGAGGAAGCCA
ATATGTTCGACCTCTTAGATGATCTACAACCCCCAATTTTTTATGCAGACGTAGATGGGCAATGCGTCGAGAATGAGAGGTCCACTAATTCCCACGTGAATGAGACATCG
AGTCGATTTGAGGACTTAATGTCTAAGGCCCGTAATCCATTATATCCTGGTTGTACACGATTTTCTTCATTACACTTTATGGTCAAGTTGATGCATGCTAAAGTTATCAA
CGGTTGGAGTACCAACACTACTACAAATTTAACCTTTGTTGATGGCTAA
Protein sequenceShow/hide protein sequence
MNKVWIKIRDKLSTENKVGVAQFLEIAKLHITNLGKTRRPCKKCMNAVWRSLHGMERHLLMSTVEPSGVNEEANMFDLLDDLQPPIFYADVDGQCVENERSTNSHVNETS
SRFEDLMSKARNPLYPGCTRFSSLHFMVKLMHAKVINGWSTNTTTNLTFVDG