| GenBank top hits | e value | %identity | Alignment |
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| BBH07178.1 transposable element gene [Prunus dulcis] | 7.2e-39 | 41.09 | Show/hide |
Query: IYKIFCSTKNSAELWGALEKKYGSEELSFKRNHQNNNKPKDKCISQ-----------------KNLGPPCWVCGKTNHLARDCFQRKGGTSKP-----HA
+Y ++ TKN+ LW LE +YG E+ RN Q NN+ +Q N PC+VCG+TNH A+DC +K KP
Subjt: IYKIFCSTKNSAELWGALEKKYGSEELSFKRNHQNNNKPKDKCISQ-----------------KNLGPPCWVCGKTNHLARDCFQRKGGTSKP-----HA
Query: PSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNV
S K Q NV+ DQ P N +DWW DSGA+VHVC +K+ F +YQ SS SV +GN A V+G GEV LK++SGK L L +V
Subjt: PSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNV
Query: LHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLF-KLNVANTE
HVPE+ +NL+S LV+QG+K+V ESNR VI+R +FIGK Y D +F KL + E
Subjt: LHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLF-KLNVANTE
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| KYP31709.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 6.4e-56 | 54.55 | Show/hide |
Query: KYG-SEELSFKRN--HQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLV
K+G S S +N NN KPK K ++ C+VCG+ NH A+DCF R K TS P S+++PQANV+TA+ A S PS+ Y++++PELN +
Subjt: KYG-SEELSFKRN--HQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLV
Query: VNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRY
NSNDWW DSGA+VHVC++KKLFSSYQE TR+V MGNG+ A V G G V L+LSSG L+L V HV EI KNL+S LLV+QGFKVVFESNR VISR+
Subjt: VNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRY
Query: GIFIGKCYLVDGLFKLNV----ANTEFPCSYSVVANVECSDI
G F+GK Y+ DGLFKL++ N S S ++NVEC DI
Subjt: GIFIGKCYLVDGLFKLNV----ANTEFPCSYSVVANVECSDI
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| KYP33726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 6.4e-56 | 54.55 | Show/hide |
Query: KYG-SEELSFKRN--HQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLV
K+G S S +N NN KPK K ++ C+VCG+ NH A+DCF R K TS P S+++PQANV+TA+ A S PS+ Y++++PELN +
Subjt: KYG-SEELSFKRN--HQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLV
Query: VNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRY
NSNDWW DSGA+VHVC++KKLFSSYQE TR+V MGNG+ A V G G V L+LSSG L+L V HV EI KNL+S LLV+QGFKVVFESNR VISR+
Subjt: VNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRY
Query: GIFIGKCYLVDGLFKLNV----ANTEFPCSYSVVANVECSDI
G F+GK Y+ DGLFKL++ N S S ++NVEC DI
Subjt: GIFIGKCYLVDGLFKLNV----ANTEFPCSYSVVANVECSDI
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| KYP36550.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] | 1.2e-41 | 46.85 | Show/hide |
Query: QNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNK
+N NKPK K + G+++H +++ +N KP++ + + Y++++PELN + NSNDWW DSGA+VHVC++K
Subjt: QNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNK
Query: KLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLFKLNV--
KLFSSYQE TR+V MGNG+ A V G V L+LSSG L+L V HV +I KNL+S LLV+QGFKVVFESNR VISR+G F+GK Y+ DGLFKLN+
Subjt: KLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLFKLNV--
Query: --ANTEFPCSYSVVANVECSDI
N S S ++NVEC DI
Subjt: --ANTEFPCSYSVVANVECSDI
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| KYP59031.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.4e-55 | 55.22 | Show/hide |
Query: KRNHQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGA
K+ NN KPK K ++ C+VCG+ NH A+DCF R K TS P S+++PQ NV+TA+ A S PS+ Y++++PELN + NSNDWW DSGA
Subjt: KRNHQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGA
Query: SVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDG
+VHVC++KKLFSSYQE TR+V MGNG+ A V G G V L+LSS L+L V HV EI KNL+SV LLV+QGFKVVFESNR VIS++G F+GK Y+ DG
Subjt: SVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDG
Query: LFKLNV----ANTEFPCSYSVVANVECSDI
LFKLN+ N S S ++NVEC DI
Subjt: LFKLNV----ANTEFPCSYSVVANVECSDI
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A151QN27 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-56 | 54.55 | Show/hide |
Query: KYG-SEELSFKRN--HQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLV
K+G S S +N NN KPK K ++ C+VCG+ NH A+DCF R K TS P S+++PQANV+TA+ A S PS+ Y++++PELN +
Subjt: KYG-SEELSFKRN--HQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLV
Query: VNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRY
NSNDWW DSGA+VHVC++KKLFSSYQE TR+V MGNG+ A V G G V L+LSSG L+L V HV EI KNL+S LLV+QGFKVVFESNR VISR+
Subjt: VNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRY
Query: GIFIGKCYLVDGLFKLNV----ANTEFPCSYSVVANVECSDI
G F+GK Y+ DGLFKL++ N S S ++NVEC DI
Subjt: GIFIGKCYLVDGLFKLNV----ANTEFPCSYSVVANVECSDI
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| A0A151QU04 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-56 | 54.55 | Show/hide |
Query: KYG-SEELSFKRN--HQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLV
K+G S S +N NN KPK K ++ C+VCG+ NH A+DCF R K TS P S+++PQANV+TA+ A S PS+ Y++++PELN +
Subjt: KYG-SEELSFKRN--HQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLV
Query: VNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRY
NSNDWW DSGA+VHVC++KKLFSSYQE TR+V MGNG+ A V G G V L+LSSG L+L V HV EI KNL+S LLV+QGFKVVFESNR VISR+
Subjt: VNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRY
Query: GIFIGKCYLVDGLFKLNV----ANTEFPCSYSVVANVECSDI
G F+GK Y+ DGLFKL++ N S S ++NVEC DI
Subjt: GIFIGKCYLVDGLFKLNV----ANTEFPCSYSVVANVECSDI
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| A0A151R1Y0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) | 5.7e-42 | 46.85 | Show/hide |
Query: QNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNK
+N NKPK K + G+++H +++ +N KP++ + + Y++++PELN + NSNDWW DSGA+VHVC++K
Subjt: QNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNK
Query: KLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLFKLNV--
KLFSSYQE TR+V MGNG+ A V G V L+LSSG L+L V HV +I KNL+S LLV+QGFKVVFESNR VISR+G F+GK Y+ DGLFKLN+
Subjt: KLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLFKLNV--
Query: --ANTEFPCSYSVVANVECSDI
N S S ++NVEC DI
Subjt: --ANTEFPCSYSVVANVECSDI
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| A0A151SW62 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.0e-56 | 55.22 | Show/hide |
Query: KRNHQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGA
K+ NN KPK K ++ C+VCG+ NH A+DCF R K TS P S+++PQ NV+TA+ A S PS+ Y++++PELN + NSNDWW DSGA
Subjt: KRNHQNNNKPKDKCISQKNLGPPCWVCGKTNHLARDCFQR----KGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGA
Query: SVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDG
+VHVC++KKLFSSYQE TR+V MGNG+ A V G G V L+LSS L+L V HV EI KNL+SV LLV+QGFKVVFESNR VIS++G F+GK Y+ DG
Subjt: SVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDG
Query: LFKLNV----ANTEFPCSYSVVANVECSDI
LFKLN+ N S S ++NVEC DI
Subjt: LFKLNV----ANTEFPCSYSVVANVECSDI
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| A0A4Y1RTG6 Transposable element protein | 3.5e-39 | 41.09 | Show/hide |
Query: IYKIFCSTKNSAELWGALEKKYGSEELSFKRNHQNNNKPKDKCISQ-----------------KNLGPPCWVCGKTNHLARDCFQRKGGTSKP-----HA
+Y ++ TKN+ LW LE +YG E+ RN Q NN+ +Q N PC+VCG+TNH A+DC +K KP
Subjt: IYKIFCSTKNSAELWGALEKKYGSEELSFKRNHQNNNKPKDKCISQ-----------------KNLGPPCWVCGKTNHLARDCFQRKGGTSKP-----HA
Query: PSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNV
S K Q NV+ DQ P N +DWW DSGA+VHVC +K+ F +YQ SS SV +GN A V+G GEV LK++SGK L L +V
Subjt: PSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNV
Query: LHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLF-KLNVANTE
HVPE+ +NL+S LV+QG+K+V ESNR VI+R +FIGK Y D +F KL + E
Subjt: LHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLF-KLNVANTE
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.0e-11 | 25.97 | Show/hide |
Query: CWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSIL---PSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKM
C+ C + H RDC + G + N A +V + V + ++S PE ++W D+ AS H + LF Y +VKM
Subjt: CWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSIL---PSSGYYISNPELNLVVNSNDWWFDSGASVHVCSNKKLFSSYQESSTRSVKM
Query: GNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLFKLN
GN + + + G G++ +K + G L+L +V HVP++ NL+S L G++ F + + +++ + I K L++ N
Subjt: GNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLLVEQGFKVVFESNRAVISRYGIFIGKCYLVDGLFKLN
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.7e-06 | 29.61 | Show/hide |
Query: RNHQNNNKPKDKCISQKNLGP----------PCWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVV----NS
RN+ NN+KP + S N P C +CG H A+ C Q + H S+ Q P S + P NL + +S
Subjt: RNHQNNNKPKDKCISQKNLGP----------PCWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVV----NS
Query: NDWWFDSGASVHVCSNKKLFSSYQE-SSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLL
N+W DSGA+ H+ S+ S +Q + V + +G+ + G L S + L L N+L+VP I KNL+SV+ L
Subjt: NDWWFDSGASVHVCSNKKLFSSYQE-SSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.4e-05 | 28.89 | Show/hide |
Query: RNHQNNN------KPKDKCISQKNLGPP-----CWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNS---
RN+ NNN +P N P C +C H A+ C Q S + +T P + P NL VNS
Subjt: RNHQNNN------KPKDKCISQKNLGPP-----CWVCGKTNHLARDCFQRKGGTSKPHAPSNTKPQANVVTADQAVSILPSSGYYISNPELNLVVNS---
Query: -NDWWFDSGASVHVCSNKKLFSSYQE-SSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLL
N+W DSGA+ H+ S+ S +Q + V + +G+ + G L SS + L L+ VL+VP I KNL+SV+ L
Subjt: -NDWWFDSGASVHVCSNKKLFSSYQE-SSTRSVKMGNGNEAIVKGEGEVLLKLSSGKDLLLSNVLHVPEIFKNLVSVFLL
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