; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005493 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005493
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:19596089..19597731
RNA-Seq ExpressionLag0005493
SyntenyLag0005493
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN62318.1 hypothetical protein VITISV_026527 [Vitis vinifera]6.6e-6635.88Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------
        FV  RQIL A LIANE++D+ + S + GVV K+DF+KA+D V WDFLD VL+ KGF         GC+               W                
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------

Query:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK
             +D LSR+L  + +   +    VG +   VSHLQFADDT+ FS       Q+   ++ VF   SGL +N  KS + GIN+  + L  L      K 
Subjt:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK

Query:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGSTG-----------
          WP  YL LPLGGNPK   FW PV+ERI  +L  W+  Y+S GGR TLI + L+ +P Y+LSLFK+ + VA  ++++ RDF W    G           
Subjt:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGSTG-----------

Query:  IVPLK---------------------LSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNEEIMEWANLSDLLSAV----IIRNVQDSWLWPLDSS
         V  K                     +  PRL R+      S++ V   S    W+L  RRNL++  +E  +L  L+ ++    +  +V D+ LWPL SS
Subjt:  IVPLK---------------------LSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNEEIMEWANLSDLLSAV----IIRNVQDSWLWPLDSS

Query:  NAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC
          F+VKS    L  S GS +N     +W  Q P K+K F+W ++H   NT D LQ RR     SP + +LC
Subjt:  NAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC

CAN66330.1 hypothetical protein VITISV_000598 [Vitis vinifera]2.4e-6837.83Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGFGCVWFS--------------------------------------
        FV  RQILDA LIANE++D+ K S + GVV K+DF+KA+D V+WDFLD VL+ KGF   W S                                      
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGFGCVWFS--------------------------------------

Query:  ------DCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK
              D LSR+L    +   +    VG +   VSHLQFADDT+LF++      Q+   ++ VF   SGL +N  KS L GIN+  + L  L S    K 
Subjt:  ------DCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK

Query:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGS-------------
         DWP  YLGLPLGGNP    FW PVIERI R+L  W+ +Y+S GGR TL+H+ LS +P Y+LSLFK+ + VA  +++L RDF W G              
Subjt:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGS-------------

Query:  --TGIVPLKLSYPRLHRLSTRLTDSVAQVWNSESK-AWDLGLRRNLNE-EIMEWANLSDLLSAV-IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSS
           G   LK  YPRL R+       ++ +  S    +W+   RRNL + EI +   L   L  + +  +  D+  W L S+  FTVKS    L     SS
Subjt:  --TGIVPLKLSYPRLHRLSTRLTDSVAQVWNSESK-AWDLGLRRNLNE-EIMEWANLSDLLSAV-IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSS

Query:  RNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC
               +WK Q   K+K  +W ++H   NT D LQ RR     SP++  LC
Subjt:  RNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC

CAN74004.1 hypothetical protein VITISV_006235 [Vitis vinifera]3.6e-6433.52Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------
        FV  RQILDA LIANE++D+ + S + GVV K+DF+KA+D V WDFLD VL+ KGF         GC+               W                
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------

Query:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK
             +D LS++L  + +   +    VG +   VSHLQFADDT+ FS       Q+   ++ VF   SGL +N  KS + GIN+  + L  L      K 
Subjt:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK

Query:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFW----------------
          WP  YLGLPLGGNPK   FW PV+ERI  +L  W+ +Y+S  GR TLI + L+ +P Y+LSLFKM + VA  +++L RDF W                
Subjt:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFW----------------

Query:  --------------------------------EGST-----------------------------------GIVPLKLSYPRLHRLSTRLTDSVAQV-WN
                                        EGS                                    G   L   YPRL R+      S++ V   
Subjt:  --------------------------------EGST-----------------------------------GIVPLKLSYPRLHRLSTRLTDSVAQV-WN

Query:  SESKAWDLGLRRNLNEEIMEWANLSDLLSAV----IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTN
        S    W+L  RRNL++  +E  +L  L+ ++    +  +V D+ LWPL SS  F+VKS    L  S+GSS+N     +W  Q P K+K F+W ++H   N
Subjt:  SESKAWDLGLRRNLNEEIMEWANLSDLLSAV----IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTN

Query:  TTDRLQ-RRMLIIFSPHLGVLC
        T D LQ RR     SP + +LC
Subjt:  TTDRLQ-RRMLIIFSPHLGVLC

RVW32700.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.1e-6835.97Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGFGCVW---------------------FSDCLSRLLTYSAQMGKIM
        FV  RQI+DA LIANE++D+ + S + GVV K+DF+KA+D V WDFLD VL+ KGF   W                      +D LSR+L  + +   + 
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGFGCVW---------------------FSDCLSRLLTYSAQMGKIM

Query:  THPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKKGDWPTTYLGLPLGGNPKLTSFWQ
           VG +   VSHLQFADDT+ FS       Q+   ++  F   SGL +N  KS + GIN+  + +  L      K   WP  YLGLPLGGNP+   FW 
Subjt:  THPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKKGDWPTTYLGLPLGGNPKLTSFWQ

Query:  PVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEG-------------------------------------
        PVIERI R+L  W+ +Y+S GGR TLI + L+ MP YYLSLFK+ + VA  +++L RDF W G                                     
Subjt:  PVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEG-------------------------------------

Query:  ----------------STGIVPLKLSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNE-EIMEWANLSDLLSAV-IIRNVQDSWLWPLDSSNAFT
                          G  PL   YP L R+       ++ V   +   +W+L  RRNL++ EI +   L   L  V +  +V D+ LWPL SS  F+
Subjt:  ----------------STGIVPLKLSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNE-EIMEWANLSDLLSAV-IIRNVQDSWLWPLDSSNAFT

Query:  VKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC
        VKS    L    GS +      +W  Q P K++ F+W ++H   NT D LQ RR     SP + +LC
Subjt:  VKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC

RVW93866.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.3e-6634.6Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------
        FV  RQILDA LIANE++D+ + S + GVV K+DF+KA+D V WDFLD VL+ KGF         GC+               W                
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------

Query:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK
             +D LS++L  + +   +    VG +   VSHLQFADDT+ FS       Q+   ++ VF   SGL +N  KS + GIN+  + L  L      K 
Subjt:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK

Query:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGS-------------
          WP  YLGLPLGGNPK   FW PV+ERI  +L  W+ +Y+S  GR TLI + L+ +P Y+LSLFKM + VA  +++L RDF W G              
Subjt:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGS-------------

Query:  ------------------------------------------------TGIVPLKLSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNEEIMEWA
                                                         G   L   YPRL R+      S++ V   S    W+L  RRNL++  +E  
Subjt:  ------------------------------------------------TGIVPLKLSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNEEIMEWA

Query:  NLSDLLSAV----IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC
        +L  L+ ++    +  +V D+ LWPL SS  F+VKS    L  S+GSS+N     +W  Q P K+K F+W ++H   NT D LQ RR     SP + +LC
Subjt:  NLSDLLSAV----IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC

TrEMBL top hitse value%identityAlignment
A0A438DB63 Transposon TX1 uncharacterized 149 kDa protein3.4e-6835.97Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGFGCVW---------------------FSDCLSRLLTYSAQMGKIM
        FV  RQI+DA LIANE++D+ + S + GVV K+DF+KA+D V WDFLD VL+ KGF   W                      +D LSR+L  + +   + 
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGFGCVW---------------------FSDCLSRLLTYSAQMGKIM

Query:  THPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKKGDWPTTYLGLPLGGNPKLTSFWQ
           VG +   VSHLQFADDT+ FS       Q+   ++  F   SGL +N  KS + GIN+  + +  L      K   WP  YLGLPLGGNP+   FW 
Subjt:  THPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKKGDWPTTYLGLPLGGNPKLTSFWQ

Query:  PVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEG-------------------------------------
        PVIERI R+L  W+ +Y+S GGR TLI + L+ MP YYLSLFK+ + VA  +++L RDF W G                                     
Subjt:  PVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEG-------------------------------------

Query:  ----------------STGIVPLKLSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNE-EIMEWANLSDLLSAV-IIRNVQDSWLWPLDSSNAFT
                          G  PL   YP L R+       ++ V   +   +W+L  RRNL++ EI +   L   L  V +  +V D+ LWPL SS  F+
Subjt:  ----------------STGIVPLKLSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNE-EIMEWANLSDLLSAV-IIRNVQDSWLWPLDSSNAFT

Query:  VKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC
        VKS    L    GS +      +W  Q P K++ F+W ++H   NT D LQ RR     SP + +LC
Subjt:  VKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC

A0A438IAX3 Transposon TX1 uncharacterized 149 kDa protein6.5e-6734.6Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------
        FV  RQILDA LIANE++D+ + S + GVV K+DF+KA+D V WDFLD VL+ KGF         GC+               W                
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------

Query:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK
             +D LS++L  + +   +    VG +   VSHLQFADDT+ FS       Q+   ++ VF   SGL +N  KS + GIN+  + L  L      K 
Subjt:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK

Query:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGS-------------
          WP  YLGLPLGGNPK   FW PV+ERI  +L  W+ +Y+S  GR TLI + L+ +P Y+LSLFKM + VA  +++L RDF W G              
Subjt:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGS-------------

Query:  ------------------------------------------------TGIVPLKLSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNEEIMEWA
                                                         G   L   YPRL R+      S++ V   S    W+L  RRNL++  +E  
Subjt:  ------------------------------------------------TGIVPLKLSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNEEIMEWA

Query:  NLSDLLSAV----IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC
        +L  L+ ++    +  +V D+ LWPL SS  F+VKS    L  S+GSS+N     +W  Q P K+K F+W ++H   NT D LQ RR     SP + +LC
Subjt:  NLSDLLSAV----IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC

A5AD48 Reverse transcriptase domain-containing protein3.2e-6635.88Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------
        FV  RQIL A LIANE++D+ + S + GVV K+DF+KA+D V WDFLD VL+ KGF         GC+               W                
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------

Query:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK
             +D LSR+L  + +   +    VG +   VSHLQFADDT+ FS       Q+   ++ VF   SGL +N  KS + GIN+  + L  L      K 
Subjt:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK

Query:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGSTG-----------
          WP  YL LPLGGNPK   FW PV+ERI  +L  W+  Y+S GGR TLI + L+ +P Y+LSLFK+ + VA  ++++ RDF W    G           
Subjt:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGSTG-----------

Query:  IVPLK---------------------LSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNEEIMEWANLSDLLSAV----IIRNVQDSWLWPLDSS
         V  K                     +  PRL R+      S++ V   S    W+L  RRNL++  +E  +L  L+ ++    +  +V D+ LWPL SS
Subjt:  IVPLK---------------------LSYPRLHRLSTRLTDSVAQVWN-SESKAWDLGLRRNLNEEIMEWANLSDLLSAV----IIRNVQDSWLWPLDSS

Query:  NAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC
          F+VKS    L  S GS +N     +W  Q P K+K F+W ++H   NT D LQ RR     SP + +LC
Subjt:  NAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC

A5B0H6 Reverse transcriptase domain-containing protein1.8e-6433.52Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------
        FV  RQILDA LIANE++D+ + S + GVV K+DF+KA+D V WDFLD VL+ KGF         GC+               W                
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGF---------GCV---------------W----------------

Query:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK
             +D LS++L  + +   +    VG +   VSHLQFADDT+ FS       Q+   ++ VF   SGL +N  KS + GIN+  + L  L      K 
Subjt:  ----FSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK

Query:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFW----------------
          WP  YLGLPLGGNPK   FW PV+ERI  +L  W+ +Y+S  GR TLI + L+ +P Y+LSLFKM + VA  +++L RDF W                
Subjt:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFW----------------

Query:  --------------------------------EGST-----------------------------------GIVPLKLSYPRLHRLSTRLTDSVAQV-WN
                                        EGS                                    G   L   YPRL R+      S++ V   
Subjt:  --------------------------------EGST-----------------------------------GIVPLKLSYPRLHRLSTRLTDSVAQV-WN

Query:  SESKAWDLGLRRNLNEEIMEWANLSDLLSAV----IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTN
        S    W+L  RRNL++  +E  +L  L+ ++    +  +V D+ LWPL SS  F+VKS    L  S+GSS+N     +W  Q P K+K F+W ++H   N
Subjt:  SESKAWDLGLRRNLNEEIMEWANLSDLLSAV----IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTN

Query:  TTDRLQ-RRMLIIFSPHLGVLC
        T D LQ RR     SP + +LC
Subjt:  TTDRLQ-RRMLIIFSPHLGVLC

A5C3T9 Uncharacterized protein1.2e-6837.83Show/hide
Query:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGFGCVWFS--------------------------------------
        FV  RQILDA LIANE++D+ K S + GVV K+DF+KA+D V+WDFLD VL+ KGF   W S                                      
Subjt:  FVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGFGCVWFS--------------------------------------

Query:  ------DCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK
              D LSR+L    +   +    VG +   VSHLQFADDT+LF++      Q+   ++ VF   SGL +N  KS L GIN+  + L  L S    K 
Subjt:  ------DCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSFHGQSF-YIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKK

Query:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGS-------------
         DWP  YLGLPLGGNP    FW PVIERI R+L  W+ +Y+S GGR TL+H+ LS +P Y+LSLFK+ + VA  +++L RDF W G              
Subjt:  GDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGS-------------

Query:  --TGIVPLKLSYPRLHRLSTRLTDSVAQVWNSESK-AWDLGLRRNLNE-EIMEWANLSDLLSAV-IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSS
           G   LK  YPRL R+       ++ +  S    +W+   RRNL + EI +   L   L  + +  +  D+  W L S+  FTVKS    L     SS
Subjt:  --TGIVPLKLSYPRLHRLSTRLTDSVAQVWNSESK-AWDLGLRRNLNE-EIMEWANLSDLLSAV-IIRNVQDSWLWPLDSSNAFTVKSLMEDLVHSNGSS

Query:  RNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC
               +WK Q   K+K  +W ++H   NT D LQ RR     SP++  LC
Subjt:  RNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQ-RRMLIIFSPHLGVLC

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.3e-0537.5Show/hide
Query:  VIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGST
        ++ER+  ++  W+   +S  GR TL  A LSSMP++ +S   +   +   LD+L R F W GST
Subjt:  VIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLSLFKMSSKVAKSLDKLIRDFFWEGST

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTCGTATCTAATCGACAAATTTTGGATGCTTCATTGATTGCGAATGAATTGATTGATGACGGAAAATTCTCTAATAAGAGAGGTGTGGTTATTAAGTTGGATTT
CAAAAAGGCATTTGATAAAGTTGATTGGGATTTTCTGGATGTTGTCCTTCAAGCTAAAGGCTTTGGTTGTGTTTGGTTCTCTGATTGTTTAAGTCGATTATTGACCTACA
GTGCACAAATGGGGAAGATTATGACTCATCCTGTTGGCAATTCTTCCCTAAATGTGAGTCACTTACAGTTTGCAGATGATACTTTGTTATTCTCTACCATTGATTCTTTC
CATGGACAATCTTTTTATATCATTAAAGTATTTGAACTTGCATCTGGTTTGAATATTAACTTTGGCAAAAGTGAACTATTGGGGATTAATGTTGGTGATTCAGAATTAGA
AGTTTTAACTTCAAAGTTTGGCTTCAAAAAAGGAGATTGGCCAACAACCTATCTTGGTCTTCCCTTAGGTGGAAATCCTAAGTTAACATCATTTTGGCAGCCAGTAATTG
AGAGAATTCAACGCAAGCTTCACAATTGGAAGTATTCGTACATTTCAAAAGGTGGTAGGTACACTCTTATTCATGCGACTCTCTCGAGCATGCCTATTTATTACCTCTCT
TTGTTTAAAATGTCATCTAAGGTAGCCAAATCTTTAGACAAGCTCATTCGAGACTTCTTTTGGGAAGGTTCCACAGGCATCGTTCCTCTTAAATTATCATATCCTCGACT
TCATCGGTTATCAACTAGACTTACAGATTCAGTTGCTCAAGTTTGGAATTCAGAATCTAAAGCATGGGATTTGGGCCTCCGTCGAAATTTAAATGAGGAGATTATGGAAT
GGGCCAATCTCTCAGATCTCCTATCTGCAGTCATCATTAGAAATGTTCAAGATTCTTGGTTATGGCCTCTTGACTCTTCTAATGCTTTTACCGTCAAATCTCTAATGGAA
GATTTAGTCCATTCAAATGGGTCATCTCGGAACAACCTATTCTCGATAATTTGGAAGGACCAATACCCAAGGAAGATCAAAATTTTCTTATGGGAGCTTAGTCATGGTGG
AACCAACACTACTGATAGATTACAAAGAAGAATGCTAATTATTTTCTCTCCCCATCTTGGTGTGTTATGTGCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTCGTATCTAATCGACAAATTTTGGATGCTTCATTGATTGCGAATGAATTGATTGATGACGGAAAATTCTCTAATAAGAGAGGTGTGGTTATTAAGTTGGATTT
CAAAAAGGCATTTGATAAAGTTGATTGGGATTTTCTGGATGTTGTCCTTCAAGCTAAAGGCTTTGGTTGTGTTTGGTTCTCTGATTGTTTAAGTCGATTATTGACCTACA
GTGCACAAATGGGGAAGATTATGACTCATCCTGTTGGCAATTCTTCCCTAAATGTGAGTCACTTACAGTTTGCAGATGATACTTTGTTATTCTCTACCATTGATTCTTTC
CATGGACAATCTTTTTATATCATTAAAGTATTTGAACTTGCATCTGGTTTGAATATTAACTTTGGCAAAAGTGAACTATTGGGGATTAATGTTGGTGATTCAGAATTAGA
AGTTTTAACTTCAAAGTTTGGCTTCAAAAAAGGAGATTGGCCAACAACCTATCTTGGTCTTCCCTTAGGTGGAAATCCTAAGTTAACATCATTTTGGCAGCCAGTAATTG
AGAGAATTCAACGCAAGCTTCACAATTGGAAGTATTCGTACATTTCAAAAGGTGGTAGGTACACTCTTATTCATGCGACTCTCTCGAGCATGCCTATTTATTACCTCTCT
TTGTTTAAAATGTCATCTAAGGTAGCCAAATCTTTAGACAAGCTCATTCGAGACTTCTTTTGGGAAGGTTCCACAGGCATCGTTCCTCTTAAATTATCATATCCTCGACT
TCATCGGTTATCAACTAGACTTACAGATTCAGTTGCTCAAGTTTGGAATTCAGAATCTAAAGCATGGGATTTGGGCCTCCGTCGAAATTTAAATGAGGAGATTATGGAAT
GGGCCAATCTCTCAGATCTCCTATCTGCAGTCATCATTAGAAATGTTCAAGATTCTTGGTTATGGCCTCTTGACTCTTCTAATGCTTTTACCGTCAAATCTCTAATGGAA
GATTTAGTCCATTCAAATGGGTCATCTCGGAACAACCTATTCTCGATAATTTGGAAGGACCAATACCCAAGGAAGATCAAAATTTTCTTATGGGAGCTTAGTCATGGTGG
AACCAACACTACTGATAGATTACAAAGAAGAATGCTAATTATTTTCTCTCCCCATCTTGGTGTGTTATGTGCTGCTTAA
Protein sequenceShow/hide protein sequence
MVFVSNRQILDASLIANELIDDGKFSNKRGVVIKLDFKKAFDKVDWDFLDVVLQAKGFGCVWFSDCLSRLLTYSAQMGKIMTHPVGNSSLNVSHLQFADDTLLFSTIDSF
HGQSFYIIKVFELASGLNINFGKSELLGINVGDSELEVLTSKFGFKKGDWPTTYLGLPLGGNPKLTSFWQPVIERIQRKLHNWKYSYISKGGRYTLIHATLSSMPIYYLS
LFKMSSKVAKSLDKLIRDFFWEGSTGIVPLKLSYPRLHRLSTRLTDSVAQVWNSESKAWDLGLRRNLNEEIMEWANLSDLLSAVIIRNVQDSWLWPLDSSNAFTVKSLME
DLVHSNGSSRNNLFSIIWKDQYPRKIKIFLWELSHGGTNTTDRLQRRMLIIFSPHLGVLCAA