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Lag0005511 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005511
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr6:19883809..19884342
RNA-Seq ExpressionLag0005511
SyntenyLag0005511
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]3.0e-4255.06Show/hide
Query:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS
        MANA  +    + +   FS+PPLNQ+LNQ+TT+KLDR N+LLWK LAL IL+ YKLEGHLT + PC S F L AS+    V    +   IGA+SS     
Subjt:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS

Query:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
             +P + VNPL+E W+  D LLLGWLYNSMTP+VA Q+MGF N  DLW A Q+ FGVQSRAEED+LR + Q +RK
Subjt:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]3.0e-4255.06Show/hide
Query:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS
        MANA  +    + +   FS+PPLNQ+LNQ+TT+KLDR N+LLWK LAL IL+ YKLEGHLT + PC S F L AS+    V    +   IGA+SS     
Subjt:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS

Query:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
             +P + VNPL+E W+  D LLLGWLYNSMTP+VA Q+MGF N  DLW A Q+ FGVQSRAEED+LR + Q +RK
Subjt:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

XP_016902204.1 PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]3.0e-4255.06Show/hide
Query:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS
        MANA  +    + +   FS+PPLNQ+LNQ+TT+KLDR N+LLWK LAL IL+ YKLEGHLT + PC S F L AS+    V    +   IGA+SS     
Subjt:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS

Query:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
             +P + VNPL+E W+  D LLLGWLYNSMTP+VA Q+MGF N  DLW A Q+ FGVQSRAEED+LR + Q +RK
Subjt:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]3.0e-4255.06Show/hide
Query:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS
        MANA  +    + +   FS+PPLNQ+LNQ+TT+KLDR N+LLWK LAL IL+ YKLEGHLT + PC S F L AS+    V    +   IGA+SS     
Subjt:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS

Query:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
             +P + VNPL+E W+  D LLLGWLYNSMTP+VA Q+MGF N  DLW A Q+ FGVQSRAEED+LR + Q +RK
Subjt:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]3.9e-4257.93Show/hide
Query:  TGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKFLQASAVAVGVNPSSSQVDIGATSSGVVASEAADSSPALEVNPL
        +G  F+SPPLNQLLNQ+T+IK+DRGNFLLW+NLAL ILRSYKL  +LTGDKPC    L  +                 T + +  S ++ SSP L  NP 
Subjt:  TGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKFLQASAVAVGVNPSSSQVDIGATSSGVVASEAADSSPALEVNPL

Query:  YESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
        YE+W+ VD+LLLGWLYNSM  +VA QVMGF  +R+LW A+QELFGVQSRAE DYL+ VFQQ+ K
Subjt:  YESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X11.5e-4255.06Show/hide
Query:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS
        MANA  +    + +   FS+PPLNQ+LNQ+TT+KLDR N+LLWK LAL IL+ YKLEGHLT + PC S F L AS+    V    +   IGA+SS     
Subjt:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS

Query:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
             +P + VNPL+E W+  D LLLGWLYNSMTP+VA Q+MGF N  DLW A Q+ FGVQSRAEED+LR + Q +RK
Subjt:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X41.5e-4255.06Show/hide
Query:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS
        MANA  +    + +   FS+PPLNQ+LNQ+TT+KLDR N+LLWK LAL IL+ YKLEGHLT + PC S F L AS+    V    +   IGA+SS     
Subjt:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS

Query:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
             +P + VNPL+E W+  D LLLGWLYNSMTP+VA Q+MGF N  DLW A Q+ FGVQSRAEED+LR + Q +RK
Subjt:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X31.5e-4255.06Show/hide
Query:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS
        MANA  +    + +   FS+PPLNQ+LNQ+TT+KLDR N+LLWK LAL IL+ YKLEGHLT + PC S F L AS+    V    +   IGA+SS     
Subjt:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS

Query:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
             +P + VNPL+E W+  D LLLGWLYNSMTP+VA Q+MGF N  DLW A Q+ FGVQSRAEED+LR + Q +RK
Subjt:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

A0A1S4E2K3 uncharacterized protein LOC107991581 isoform X51.5e-4255.06Show/hide
Query:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS
        MANA  +    + +   FS+PPLNQ+LNQ+TT+KLDR N+LLWK LAL IL+ YKLEGHLT + PC S F L AS+    V    +   IGA+SS     
Subjt:  MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKF-LQASAVAVGVNPSSSQVDIGATSSGVVAS

Query:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
             +P + VNPL+E W+  D LLLGWLYNSMTP+VA Q+MGF N  DLW A Q+ FGVQSRAEED+LR + Q +RK
Subjt:  EAADSSPALEVNPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

A0A6J1DCW4 uncharacterized protein LOC1110195981.9e-4257.93Show/hide
Query:  TGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKFLQASAVAVGVNPSSSQVDIGATSSGVVASEAADSSPALEVNPL
        +G  F+SPPLNQLLNQ+T+IK+DRGNFLLW+NLAL ILRSYKL  +LTGDKPC    L  +                 T + +  S ++ SSP L  NP 
Subjt:  TGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKFLQASAVAVGVNPSSSQVDIGATSSGVVASEAADSSPALEVNPL

Query:  YESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK
        YE+W+ VD+LLLGWLYNSM  +VA QVMGF  +R+LW A+QELFGVQSRAE DYL+ VFQQ+ K
Subjt:  YESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGCCAATTCCTCCATGTATTTTGTCGCAGCTACTGGAACAACCTTTAGCAGCCCTCCGCTGAATCAGCTACTGAATCAAGTCACCACCATTAAATTAGACCG
TGGTAATTTCCTTCTGTGGAAGAATTTGGCATTGTCGATACTCCGAAGCTACAAGTTAGAGGGTCACCTAACCGGAGATAAGCCTTGTCTGTCGAAATTTTTGCAAGCAT
CAGCCGTTGCAGTTGGAGTAAATCCAAGTTCGTCTCAGGTAGATATCGGAGCAACAAGCTCAGGAGTCGTTGCAAGTGAAGCGGCTGACTCCTCTCCTGCCCTAGAAGTG
AATCCTCTGTACGAGTCGTGGTTAGCAGTGGATCAATTGTTATTGGGTTGGTTGTACAACTCAATGACACCTGAGGTAGCAACTCAGGTTATGGGTTTTGAAAACGCCAG
AGATCTATGGGGAGCGATCCAGGAGTTGTTTGGCGTACAATCGCGAGCTGAAGAAGATTATTTACGACATGTATTTCAGCAATCTAGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACGCCAATTCCTCCATGTATTTTGTCGCAGCTACTGGAACAACCTTTAGCAGCCCTCCGCTGAATCAGCTACTGAATCAAGTCACCACCATTAAATTAGACCG
TGGTAATTTCCTTCTGTGGAAGAATTTGGCATTGTCGATACTCCGAAGCTACAAGTTAGAGGGTCACCTAACCGGAGATAAGCCTTGTCTGTCGAAATTTTTGCAAGCAT
CAGCCGTTGCAGTTGGAGTAAATCCAAGTTCGTCTCAGGTAGATATCGGAGCAACAAGCTCAGGAGTCGTTGCAAGTGAAGCGGCTGACTCCTCTCCTGCCCTAGAAGTG
AATCCTCTGTACGAGTCGTGGTTAGCAGTGGATCAATTGTTATTGGGTTGGTTGTACAACTCAATGACACCTGAGGTAGCAACTCAGGTTATGGGTTTTGAAAACGCCAG
AGATCTATGGGGAGCGATCCAGGAGTTGTTTGGCGTACAATCGCGAGCTGAAGAAGATTATTTACGACATGTATTTCAGCAATCTAGGAAATGA
Protein sequenceShow/hide protein sequence
MANANSSMYFVAATGTTFSSPPLNQLLNQVTTIKLDRGNFLLWKNLALSILRSYKLEGHLTGDKPCLSKFLQASAVAVGVNPSSSQVDIGATSSGVVASEAADSSPALEV
NPLYESWLAVDQLLLGWLYNSMTPEVATQVMGFENARDLWGAIQELFGVQSRAEEDYLRHVFQQSRK