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Lag0005519 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005519
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr6:20330249..20330617
RNA-Seq ExpressionLag0005519
SyntenyLag0005519
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]8.0e-1850.41Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA KK  +K + +SD+YTGP+TRS S+GI I+      A+A  I K L ES K  + +K+NPL+      S +     +PDVMS+MMA+V  +  M EME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLK
        RK+NLLMK VDERD EIA LK
Subjt:  RKLNLLMKAVDERDLEIAYLK

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]8.0e-1850.41Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA KK  +K + +SD+YTGP+TRS S+GI I+      A+A  I K L ES K  + +K+NPL+      S +     +PDVMS+MMA+V  +  M EME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLK
        RK+NLLMK VDERD EIA LK
Subjt:  RKLNLLMKAVDERDLEIAYLK

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]8.0e-1850.41Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA KK  +K + +SD+YTGP+TRS S+GI I+      A+A  I K L ES K  + +K+NPL+      S +     +PDVMS+MMA+V  +  M EME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLK
        RK+NLLMK VDERD EIA LK
Subjt:  RKLNLLMKAVDERDLEIAYLK

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]8.0e-1850.41Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA KK  +K + +SD+YTGP+TRS S+GI I+      A+A  I K L ES K  + +K+NPL+      S +     +PDVMS+MMA+V  +  M EME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLK
        RK+NLLMK VDERD EIA LK
Subjt:  RKLNLLMKAVDERDLEIAYLK

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]8.0e-1850.41Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA KK  +K + +SD+YTGP+TRS S+GI I+      A+A  I K L ES K  + +K+NPL+      S +     +PDVMS+MMA+V  +  M EME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLK
        RK+NLLMK VDERD EIA LK
Subjt:  RKLNLLMKAVDERDLEIAYLK

TrEMBL top hitse value%identityAlignment
A0A5A7UF60 Ty3-gypsy retrotransposon protein8.0e-1646.28Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA KKV +    +SD+YTGP+TRS S+GI I+E      V   I K L ES K  + +K NPL+++    S       +PDVMS+MMA++  +  M EME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLK
        +K+N LMKAV+ERD EI  L+
Subjt:  RKLNLLMKAVDERDLEIAYLK

A0A5A7V265 Ty3-gypsy retrotransposon protein6.2e-1645.45Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA KK  +K + ++D+YTGP+TR+HS+GI  ++D     VA  I K L ES K  + +K+N L+E+    S +     +PDVMS+MMA++     M EME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLK
        RK+N+LMK V+ERD EI  L+
Subjt:  RKLNLLMKAVDERDLEIAYLK

A0A5A7VFQ8 Ty3-gypsy retrotransposon protein2.1e-1645.08Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA KK  +K + +SD+Y GP+TRS S+GI  ++D     VA  I K L ES K  + +K+NPL+++   TS +      PDVMS+MMA++  +  MV+ME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLKN
        RK+N LMK ++ERD EI  L++
Subjt:  RKLNLLMKAVDERDLEIAYLKN

A0A5A7VHE3 Ty3-gypsy retrotransposon protein2.8e-1645.9Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA  KV++K + +SD+YTGP+TRS S+GI  K+D     +A  I K L ESSK  + +K+NPL+E+    S +     +PD+M I+MA++     M EME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLKN
        RK+NLLMK ++ER  +IA L+N
Subjt:  RKLNLLMKAVDERDLEIAYLKN

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.8e-1645.45Show/hide
Query:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME
        MA KK  +  + +S++YTGP+TRS S+GI  ++D     VA  I K L ES K  + +K+NPL+++   +S +     +PDVMS+MMA++  +  M EME
Subjt:  MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEME

Query:  RKLNLLMKAVDERDLEIAYLK
        RK+N LMKAV+ERD EI  L+
Subjt:  RKLNLLMKAVDERDLEIAYLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCAAAGAAAGTTCTCGCGAAGGTTACAACATCAAGCGACTCTTACACTGGTCCTGTCACTCGTAGTCATTCCCAAGGAATTGAGATCAAGGAGGATCATACTCA
TCTTGCTGTTGCAAGCAGGATCTCAAAGTTGCTTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAATCCGTTGTTCGAATCTATCATTCCAACATCTAAGCAGC
CAAATGATACACTAAATCCTGATGTGATGTCCATCATGATGGCTAATGTAGACCAGGATGAAAGAATGGTAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCAGTT
GATGAAAGAGATCTTGAGATTGCCTATTTGAAGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCAAAGAAAGTTCTCGCGAAGGTTACAACATCAAGCGACTCTTACACTGGTCCTGTCACTCGTAGTCATTCCCAAGGAATTGAGATCAAGGAGGATCATACTCA
TCTTGCTGTTGCAAGCAGGATCTCAAAGTTGCTTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAATCCGTTGTTCGAATCTATCATTCCAACATCTAAGCAGC
CAAATGATACACTAAATCCTGATGTGATGTCCATCATGATGGCTAATGTAGACCAGGATGAAAGAATGGTAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCAGTT
GATGAAAGAGATCTTGAGATTGCCTATTTGAAGAACTGA
Protein sequenceShow/hide protein sequence
MAPKKVLAKVTTSSDSYTGPVTRSHSQGIEIKEDHTHLAVASRISKLLEESSKDKVAVKDNPLFESIIPTSKQPNDTLNPDVMSIMMANVDQDERMVEMERKLNLLMKAV
DERDLEIAYLKN