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Lag0005526 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005526
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr6:20590548..20591309
RNA-Seq ExpressionLag0005526
SyntenyLag0005526
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7810592.1 hypothetical protein G2W53_037335 [Senna tora]7.9e-1235.82Show/hide
Query:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRF-NLYYMEHHTPLSEESLIESFYGGLTPEDRRMLD
        F +SL+   + W+F LPP S+++   MM+ FL KY P +  +     I    Q P E  H++  RF  L        +SE+ LI  FY GL P +R MLD
Subjt:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRF-NLYYMEHHTPLSEESLIESFYGGLTPEDRRMLD

Query:  LASGGDVLATTSSKAWEIIAKLTKVTRFRANSPD
         ASGG ++  T ++A EII+ +   ++   +S D
Subjt:  LASGGDVLATTSSKAWEIIAKLTKVTRFRANSPD

XP_022158803.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025268 [Momordica charantia]3.7e-1761.18Show/hide
Query:  FNFGSDLISTSSMLGELRVRNANKNHGAPHVPTGPITRAKAKKLQQAFFIHIQNLLGSAQHPLHMLQINLREDDAVKVNVCKIDV
        F+ G DL  + S    +     +KNHG PHV TGPITRAKAKKLQQAF IH+QN +GS Q    MLQ N  EDD VKVNVCKIDV
Subjt:  FNFGSDLISTSSMLGELRVRNANKNHGAPHVPTGPITRAKAKKLQQAFFIHIQNLLGSAQHPLHMLQINLREDDAVKVNVCKIDV

XP_027086521.1 uncharacterized protein LOC113708257 [Coffea arabica]1.0e-1133.33Show/hide
Query:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN---LYYMEHHTPLSEESLIESFYGGLTPEDRRM
        F +SL+   + W++ LP  S+++ +++ + FLKK+ P +  V   + I    Q P E  +E+  RFN     Y +H   +SE+ LI+ FY GL   DR +
Subjt:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN---LYYMEHHTPLSEESLIESFYGGLTPEDRRM

Query:  LDLASGGDVLATTSSKAWEIIAKLTKVTR----FRANSP---DELESQISEQQ
        +D ASGG +   T  +AWE+I  +T+ ++      +NSP   +E+E+   +QQ
Subjt:  LDLASGGDVLATTSSKAWEIIAKLTKVTR----FRANSP---DELESQISEQQ

XP_027093861.1 uncharacterized protein LOC113714271 [Coffea arabica]6.1e-1232.17Show/hide
Query:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN-LYYMEHHTPLSEESLIESFYGGLTPEDRRMLD
        F +SL+   + W++ LP  S+++ +++ + FL+K+ P +      + I    Q P E  +E+  RFN LY       +SE+ LI+ FY GL P DR ++D
Subjt:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN-LYYMEHHTPLSEESLIESFYGGLTPEDRRMLD

Query:  LASGGDVLATTSSKAWEIIAKLTKVTR---FRANSPDELESQI
         ASGG +   T  KAWE+I  + + ++   FR ++P    +++
Subjt:  LASGGDVLATTSSKAWEIIAKLTKVTR---FRANSPDELESQI

XP_027181655.1 uncharacterized protein LOC113780030 [Coffea eugenioides]7.9e-1232.45Show/hide
Query:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN-LYYMEHHTPLSEESLIESFYGGLTPEDRRMLD
        F +SL+   + W++ LP  S+++ +++ + FLKK+ P +      + I    Q P E  +E+  RFN LY       +SE+ LI+ FY GL P DR ++D
Subjt:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN-LYYMEHHTPLSEESLIESFYGGLTPEDRRMLD

Query:  LASGGDVLATTSSKAWEIIAKLTKVTR---FRANSP----DELESQISEQQ
         ASGG ++  T  +AWE+I  + + ++    R ++P    +E+E+   +QQ
Subjt:  LASGGDVLATTSSKAWEIIAKLTKVTR---FRANSP----DELESQISEQQ

TrEMBL top hitse value%identityAlignment
A0A2G9G7U9 DNA-directed DNA polymerase1.9e-1137.7Show/hide
Query:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRF-NLYYMEHHTPLSEESLIESFYGGLTPEDRRMLD
        F +SL  + + W+F LPP SV++ ++M+R FL K+ P +      + I    Q   E  HE+  RF  L        +SE+ LI+ FY GL P +RRM+D
Subjt:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRF-NLYYMEHHTPLSEESLIESFYGGLTPEDRRMLD

Query:  LASGGDVLATTSSKAWEIIAKL
         ASGG V+  T S+A  +I+ +
Subjt:  LASGGDVLATTSSKAWEIIAKL

A0A6A3C6L0 Basic form of pathoproteinsis-related protein 11.5e-1134.64Show/hide
Query:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRF-NLYYMEHHTPLSEESLIESFYGGLTPEDRRMLD
        F +SL    + W+F LPP SV++ ++M RSFL ++  +A + E   RI    Q  EE  +++  RF  L        L E++LI+ FY GL+P + +M+D
Subjt:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRF-NLYYMEHHTPLSEESLIESFYGGLTPEDRRMLD

Query:  LASGGDVLATTSSKAWEIIAKL-TKVTRFRANS-PDELESQISEQQ-EGKVGK
         ASGG ++  T ++A  +I+ +     +FRAN+ P     +IS    E K+ K
Subjt:  LASGGDVLATTSSKAWEIIAKL-TKVTRFRANS-PDELESQISEQQ-EGKVGK

A0A6J1DX46 LOW QUALITY PROTEIN: uncharacterized protein LOC1110252681.8e-1761.18Show/hide
Query:  FNFGSDLISTSSMLGELRVRNANKNHGAPHVPTGPITRAKAKKLQQAFFIHIQNLLGSAQHPLHMLQINLREDDAVKVNVCKIDV
        F+ G DL  + S    +     +KNHG PHV TGPITRAKAKKLQQAF IH+QN +GS Q    MLQ N  EDD VKVNVCKIDV
Subjt:  FNFGSDLISTSSMLGELRVRNANKNHGAPHVPTGPITRAKAKKLQQAFFIHIQNLLGSAQHPLHMLQINLREDDAVKVNVCKIDV

A0A6P6U8I2 uncharacterized protein LOC1137082575.0e-1233.33Show/hide
Query:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN---LYYMEHHTPLSEESLIESFYGGLTPEDRRM
        F +SL+   + W++ LP  S+++ +++ + FLKK+ P +  V   + I    Q P E  +E+  RFN     Y +H   +SE+ LI+ FY GL   DR +
Subjt:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN---LYYMEHHTPLSEESLIESFYGGLTPEDRRM

Query:  LDLASGGDVLATTSSKAWEIIAKLTKVTR----FRANSP---DELESQISEQQ
        +D ASGG +   T  +AWE+I  +T+ ++      +NSP   +E+E+   +QQ
Subjt:  LDLASGGDVLATTSSKAWEIIAKLTKVTR----FRANSP---DELESQISEQQ

A0A6P6UU49 uncharacterized protein LOC1137142712.9e-1232.17Show/hide
Query:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN-LYYMEHHTPLSEESLIESFYGGLTPEDRRMLD
        F +SL+   + W++ LP  S+++ +++ + FL+K+ P +      + I    Q P E  +E+  RFN LY       +SE+ LI+ FY GL P DR ++D
Subjt:  FLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFN-LYYMEHHTPLSEESLIESFYGGLTPEDRRMLD

Query:  LASGGDVLATTSSKAWEIIAKLTKVTR---FRANSPDELESQI
         ASGG +   T  KAWE+I  + + ++   FR ++P    +++
Subjt:  LASGGDVLATTSSKAWEIIAKLTKVTR---FRANSPDELESQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTTCTGTACTCACTGCAAGGAGAAACTAGAATGTGGATCTTCTCTCTGCCTCCAAGGTCGGTATCTTCCAAGAGCGAGATGATGAGAAGTTTCCTGAAGAAGTA
CCACCCCATTGCACTATTGGTAGAAGCCACCGAAAGGATTTTCAACGCTGCGCAAGCACCTGAAGAGCTATTCCATGAGTTCATGAGTCGTTTCAATCTTTACTACATGG
AACACCACACCCCACTCTCAGAGGAGTCCTTGATAGAAAGCTTCTATGGAGGGCTGACACCTGAAGATAGAAGAATGCTTGACTTGGCTAGTGGAGGTGATGTACTTGCC
ACAACATCCAGTAAGGCGTGGGAGATTATTGCAAAGTTGACGAAAGTCACTAGATTTCGAGCCAACTCCCCCGATGAGCTAGAGAGCCAAATCTCAGAGCAGCAGGAAGG
TAAGGTAGGAAAAGATCCCATAAAGGTCAGTAAACCTGAACTTAATTTTTCCTTTAATTTTGGGTCTGATCTAATTAGCACATCAAGCATGTTAGGAGAGTTAAGGGTTA
GGAATGCTAATAAGAATCATGGTGCTCCACACGTTCCAACTGGACCTATTACACGCGCCAAGGCTAAGAAGCTTCAACAAGCATTCTTTATTCACATACAAAATTTGTTA
GGTTCAGCTCAACATCCATTGCACATGTTGCAAATTAACCTAAGAGAGGACGACGCTGTAAAAGTCAACGTTTGCAAGATTGACGTTGAACATGCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTTCTGTACTCACTGCAAGGAGAAACTAGAATGTGGATCTTCTCTCTGCCTCCAAGGTCGGTATCTTCCAAGAGCGAGATGATGAGAAGTTTCCTGAAGAAGTA
CCACCCCATTGCACTATTGGTAGAAGCCACCGAAAGGATTTTCAACGCTGCGCAAGCACCTGAAGAGCTATTCCATGAGTTCATGAGTCGTTTCAATCTTTACTACATGG
AACACCACACCCCACTCTCAGAGGAGTCCTTGATAGAAAGCTTCTATGGAGGGCTGACACCTGAAGATAGAAGAATGCTTGACTTGGCTAGTGGAGGTGATGTACTTGCC
ACAACATCCAGTAAGGCGTGGGAGATTATTGCAAAGTTGACGAAAGTCACTAGATTTCGAGCCAACTCCCCCGATGAGCTAGAGAGCCAAATCTCAGAGCAGCAGGAAGG
TAAGGTAGGAAAAGATCCCATAAAGGTCAGTAAACCTGAACTTAATTTTTCCTTTAATTTTGGGTCTGATCTAATTAGCACATCAAGCATGTTAGGAGAGTTAAGGGTTA
GGAATGCTAATAAGAATCATGGTGCTCCACACGTTCCAACTGGACCTATTACACGCGCCAAGGCTAAGAAGCTTCAACAAGCATTCTTTATTCACATACAAAATTTGTTA
GGTTCAGCTCAACATCCATTGCACATGTTGCAAATTAACCTAAGAGAGGACGACGCTGTAAAAGTCAACGTTTGCAAGATTGACGTTGAACATGCCTCTTGA
Protein sequenceShow/hide protein sequence
MVFLYSLQGETRMWIFSLPPRSVSSKSEMMRSFLKKYHPIALLVEATERIFNAAQAPEELFHEFMSRFNLYYMEHHTPLSEESLIESFYGGLTPEDRRMLDLASGGDVLA
TTSSKAWEIIAKLTKVTRFRANSPDELESQISEQQEGKVGKDPIKVSKPELNFSFNFGSDLISTSSMLGELRVRNANKNHGAPHVPTGPITRAKAKKLQQAFFIHIQNLL
GSAQHPLHMLQINLREDDAVKVNVCKIDVEHAS