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Lag0005527 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005527
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr6:20652035..20652505
RNA-Seq ExpressionLag0005527
SyntenyLag0005527
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]6.6e-0932.05Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDFSCGFSNNFAGRKEDEKKN
        +EVQIGQ+A+ +NA Q+G F S+TE NP+EQCK +TLRSG+++E                      +A  + S+  P + +                  N
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDFSCGFSNNFAGRKEDEKKN

Query:  GRHEEKLNEEEVVPCNHHDRGSHVSPSKRRGECPTFDYRELPFPQRFKNVKLDEQF
        G+ ++++ EEE+V  N     + + P+    + P      LP+PQRF+  KLD+QF
Subjt:  GRHEEKLNEEEVVPCNHHDRGSHVSPSKRRGECPTFDYRELPFPQRFKNVKLDEQF

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]6.6e-0932.05Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDFSCGFSNNFAGRKEDEKKN
        +EVQIGQ+A+ +NA Q+G F S+TE NP+EQCK +TLRSG+++E                      +A  + S+  P + +                  N
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDFSCGFSNNFAGRKEDEKKN

Query:  GRHEEKLNEEEVVPCNHHDRGSHVSPSKRRGECPTFDYRELPFPQRFKNVKLDEQF
        G+ ++++ EEE+V  N     + + P+    + P      LP+PQRF+  KLD+QF
Subjt:  GRHEEKLNEEEVVPCNHHDRGSHVSPSKRRGECPTFDYRELPFPQRFKNVKLDEQF

KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]3.3e-0830.77Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDFSCGFSNNFAGRKEDEKKN
        +EVQIGQ+A+ +NA Q+G F S+TE NP+EQCK +TLRSG+++E                      ++  + S+  P +++                   
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDFSCGFSNNFAGRKEDEKKN

Query:  GRHEEKLNEEEVVPCNHHDRGSHVSPSKRRGECPTFDYRELPFPQRFKNVKLDEQF
        G+ + K+ E+E+V  N     +  +P+    + P      LP+PQRF+  KLD+QF
Subjt:  GRHEEKLNEEEVVPCNHHDRGSHVSPSKRRGECPTFDYRELPFPQRFKNVKLDEQF

XP_022159119.1 uncharacterized protein LOC111025551 [Momordica charantia]2.8e-0744.68Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLE------------ISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDF
        MEVQIGQ+AS +N +QKGKF SDTE NPRE CK VTLRSG++L+             + E++ KEE  K+     +A K +   +   PNS+ +
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLE------------ISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDF

XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]3.9e-0934.62Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDFSCGFSNNFAGRKEDEKKN
        +EVQIGQ+A+ +NA Q+G F S+TE NP+EQCK +TLRSGR++E S  ++                    E +   PN                     N
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDFSCGFSNNFAGRKEDEKKN

Query:  GRHEEKLNEEEVVPCNHHDRGSHVSPSKRRGECPTFDYRELPFPQRFKNVKLDEQF
        G+ + K+ EEE+V      R + + PS    + P      LP+PQRF+  KLD+QF
Subjt:  GRHEEKLNEEEVVPCNHHDRGSHVSPSKRRGECPTFDYRELPFPQRFKNVKLDEQF

TrEMBL top hitse value%identityAlignment
A0A2I4G4Q3 uncharacterized protein LOC1090047129.7e-0655.56Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEE
        +EVQIGQ+A+ +NA Q+G F S+TE NPREQCK + LRSGR+LE   E ++ ++
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEE

A0A438FGD7 Uncharacterized protein2.8e-0550.94Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKE
        +EVQIGQ+A+ +NA Q+G F S+ E NP+EQCK +TLR+GR++E S  ++ ++
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKE

A0A6J1DU19 uncharacterized protein LOC1110243616.7e-0743.62Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLE------------ISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDF
        MEVQIGQIA  +N +QKGKF SD E  PRE CK VTLRSG++L+             + E++ KEE  K+     +A K +      PPNS+ +
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLE------------ISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDF

A0A6J1E1F6 uncharacterized protein LOC1110255511.3e-0744.68Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLE------------ISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDF
        MEVQIGQ+AS +N +QKGKF SDTE NPRE CK VTLRSG++L+             + E++ KEE  K+     +A K +   +   PNS+ +
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLE------------ISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDF

A0A6P9DWY0 uncharacterized protein LOC1183440263.9e-0765.22Show/hide
Query:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEIS
        +EVQIGQ+A+ +NA Q+G F S+TE NPREQCK +TLRSGR+L+ S
Subjt:  MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTCAAATAGGACAGATCGCTTCAGCGGTGAATGCCCTTCAGAAGGGAAAATTTCAAAGCGACACTGAACCTAACCCAAGAGAGCAGTGCAAGATGGTGACACT
AAGAAGTGGTAGGAAGCTGGAGATCAGTTCAGAACAAAAGAAGAAAGAAGAGAAGAGAAAGGATGAAGATGAAAGGGCTGAGGCACAAAAAGCCTCCTTTGAAAGGTCCC
AACATCCTCCTAACTCTATTGATTTTAGTTGTGGATTTTCTAACAATTTTGCAGGAAGAAAAGAAGATGAAAAGAAAAATGGCAGGCATGAAGAGAAACTGAATGAGGAA
GAAGTGGTTCCATGCAACCATCATGACAGAGGCTCGCACGTCAGCCCGTCCAAGCGGAGGGGCGAATGTCCAACCTTTGACTATAGGGAGTTACCTTTTCCTCAACGCTT
TAAAAATGTTAAATTAGATGAGCAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTCAAATAGGACAGATCGCTTCAGCGGTGAATGCCCTTCAGAAGGGAAAATTTCAAAGCGACACTGAACCTAACCCAAGAGAGCAGTGCAAGATGGTGACACT
AAGAAGTGGTAGGAAGCTGGAGATCAGTTCAGAACAAAAGAAGAAAGAAGAGAAGAGAAAGGATGAAGATGAAAGGGCTGAGGCACAAAAAGCCTCCTTTGAAAGGTCCC
AACATCCTCCTAACTCTATTGATTTTAGTTGTGGATTTTCTAACAATTTTGCAGGAAGAAAAGAAGATGAAAAGAAAAATGGCAGGCATGAAGAGAAACTGAATGAGGAA
GAAGTGGTTCCATGCAACCATCATGACAGAGGCTCGCACGTCAGCCCGTCCAAGCGGAGGGGCGAATGTCCAACCTTTGACTATAGGGAGTTACCTTTTCCTCAACGCTT
TAAAAATGTTAAATTAGATGAGCAGTTTTAG
Protein sequenceShow/hide protein sequence
MEVQIGQIASAVNALQKGKFQSDTEPNPREQCKMVTLRSGRKLEISSEQKKKEEKRKDEDERAEAQKASFERSQHPPNSIDFSCGFSNNFAGRKEDEKKNGRHEEKLNEE
EVVPCNHHDRGSHVSPSKRRGECPTFDYRELPFPQRFKNVKLDEQF