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Lag0005528 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005528
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr6:20655970..20656851
RNA-Seq ExpressionLag0005528
SyntenyLag0005528
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]3.6e-0940.2Show/hide
Query:  DKRPN--KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQL-KSPMDE
        D +P+  K+S  + + S V    +  KK  ++ ++ +    +N   A+KN+EVQ+GQ+AT +N  Q+G F S+TEVNP+EQCK IT RSG ++ +SP+ E
Subjt:  DKRPN--KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQL-KSPMDE

Query:  EQ
         +
Subjt:  EQ

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]3.6e-0937.72Show/hide
Query:  ETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKK-----EERKSKDE-----NGGAKAEKT
        E  V  +   +  +  ++KNMEVQ+GQIA  +N +QKGKF SD EV PRE CK +T RSG +L+ P  ++ ++     EER++K+E         +A+K 
Subjt:  ETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKK-----EERKSKDE-----NGGAKAEKT

Query:  STEWSQNPPSSFDF
        ++    +PP+S  +
Subjt:  STEWSQNPPSSFDF

XP_022159119.1 uncharacterized protein LOC111025551 [Momordica charantia]8.5e-1145.83Show/hide
Query:  VNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKK-----EERKSKDENGGAKAEKTSTEWSQNPPSS
        +  +  A+KNMEVQ+GQ+A+ +N++QKGKF SDTEVNPRE CK +T RSG +L+ P  ++ ++     EER++K+E      E T T  +  P SS
Subjt:  VNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKK-----EERKSKDENGGAKAEKTSTEWSQNPPSS

XP_035539656.1 uncharacterized protein LOC118344026 [Juglans regia]9.4e-1043Show/hide
Query:  DKRPN--KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQL-KSPMDE
        D +P+  K+S  + + S V    +  KK  ++ ++ +    +N   A+KN+EVQ+GQ+AT +N  Q+G F S+TEVNPREQCK IT RSG +L +SP +E
Subjt:  DKRPN--KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQL-KSPMDE

XP_041011488.1 uncharacterized protein LOC121255284 [Juglans microcarpa x Juglans regia]3.6e-0941.05Show/hide
Query:  KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQK
        K+S  + + S V  A +  KK  ++ ++ +    +N   A+KN+EVQ+ Q+AT +N  Q+G F S+TEVNP+EQCK IT RSG +++ P  +E K
Subjt:  KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQK

TrEMBL top hitse value%identityAlignment
A0A2I4G4Q3 uncharacterized protein LOC1090047122.5e-0839.18Show/hide
Query:  KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKKE
        K+S  + + S +    +  KK +    N   +  N      KN+EVQ+GQ+AT +N  Q+G F S+TEVNPREQCK I  RSG +L+  ++ E+ K+
Subjt:  KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKKE

A0A438FGD7 Uncharacterized protein6.2e-0751.79Show/hide
Query:  LKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQL-KSPMDEEQK
        +KN+EVQ+GQ+AT +N  Q+G F S+ E+NP+EQCK IT R+G ++ +SP  E +K
Subjt:  LKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQL-KSPMDEEQK

A0A6J1DU19 uncharacterized protein LOC1110243611.7e-0937.72Show/hide
Query:  ETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKK-----EERKSKDE-----NGGAKAEKT
        E  V  +   +  +  ++KNMEVQ+GQIA  +N +QKGKF SD EV PRE CK +T RSG +L+ P  ++ ++     EER++K+E         +A+K 
Subjt:  ETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKK-----EERKSKDE-----NGGAKAEKT

Query:  STEWSQNPPSSFDF
        ++    +PP+S  +
Subjt:  STEWSQNPPSSFDF

A0A6J1E1F6 uncharacterized protein LOC1110255514.1e-1145.83Show/hide
Query:  VNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKK-----EERKSKDENGGAKAEKTSTEWSQNPPSS
        +  +  A+KNMEVQ+GQ+A+ +N++QKGKF SDTEVNPRE CK +T RSG +L+ P  ++ ++     EER++K+E      E T T  +  P SS
Subjt:  VNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKK-----EERKSKDENGGAKAEKTSTEWSQNPPSS

A0A6P9DWY0 uncharacterized protein LOC1183440264.6e-1043Show/hide
Query:  DKRPN--KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQL-KSPMDE
        D +P+  K+S  + + S V    +  KK  ++ ++ +    +N   A+KN+EVQ+GQ+AT +N  Q+G F S+TEVNPREQCK IT RSG +L +SP +E
Subjt:  DKRPN--KLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQL-KSPMDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCGATACTCGATGGCTTCCTTGATAAGCGCCCTAACAAGCTTTCATCTTCAGAGGTGGTGAAATCAATTGTCGCCTTAGCTAAGAGCCATTCAAAGAAGGAAGA
AGAGACCACTGTGAACACTCTGGTAAATTCGGTGAATAACCATGACGTTGCTCTAAAGAACATGGAGGTCCAGCTAGGACAGATCGCGACTGCAGTAAATGTCCTTCAGA
AAGGTAAGTTCTCCAGCGACACGGAGGTAAATCCAAGAGAGCAATGCAAGGTCATCACGTTTCGGAGTGGGACTCAGTTGAAGAGTCCAATGGATGAAGAGCAGAAGAAG
GAAGAAAGAAAGAGCAAGGATGAAAATGGAGGGGCTAAGGCAGAAAAAACCTCCACAGAATGGTCCCAAAATCCTCCTAGCTCGTTTGATTTTGTTTTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCGATACTCGATGGCTTCCTTGATAAGCGCCCTAACAAGCTTTCATCTTCAGAGGTGGTGAAATCAATTGTCGCCTTAGCTAAGAGCCATTCAAAGAAGGAAGA
AGAGACCACTGTGAACACTCTGGTAAATTCGGTGAATAACCATGACGTTGCTCTAAAGAACATGGAGGTCCAGCTAGGACAGATCGCGACTGCAGTAAATGTCCTTCAGA
AAGGTAAGTTCTCCAGCGACACGGAGGTAAATCCAAGAGAGCAATGCAAGGTCATCACGTTTCGGAGTGGGACTCAGTTGAAGAGTCCAATGGATGAAGAGCAGAAGAAG
GAAGAAAGAAAGAGCAAGGATGAAAATGGAGGGGCTAAGGCAGAAAAAACCTCCACAGAATGGTCCCAAAATCCTCCTAGCTCGTTTGATTTTGTTTTTTTCTAA
Protein sequenceShow/hide protein sequence
MNSILDGFLDKRPNKLSSSEVVKSIVALAKSHSKKEEETTVNTLVNSVNNHDVALKNMEVQLGQIATAVNVLQKGKFSSDTEVNPREQCKVITFRSGTQLKSPMDEEQKK
EERKSKDENGGAKAEKTSTEWSQNPPSSFDFVFF