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Lag0005529 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005529
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr6:20759780..20760928
RNA-Seq ExpressionLag0005529
SyntenyLag0005529
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]8.1e-1142.86Show/hide
Query:  SKYMDGFIKQRLLPTTHVSTVSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVPENEGDVILFDKGSLVR
        +K  + F+K +L+PT+H +TVS  ++LL  +I+ S  IDVG+II  +++ C  KK   L FPN IT LC++  V EN  D IL    S+ R
Subjt:  SKYMDGFIKQRLLPTTHVSTVSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVPENEGDVILFDKGSLVR

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.1e-1135.37Show/hide
Query:  VIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVSTVSREQVLL
        V VRGV+V WS  AINA+  +        E  +N  +  L+++ E                           +K    F+K  LLPTTH  TVS++++LL
Subjt:  VIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVSTVSREQVLL

Query:  AFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP
          ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P
Subjt:  AFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.9e-1236.13Show/hide
Query:  TDEDEGFHVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVST
        TD +E   V VRGV+V WS  AINA+  +        E  +N  +  L+++ E                           +K    F+K RLLPTTH  T
Subjt:  TDEDEGFHVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVST

Query:  VSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP
        VS++++LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P
Subjt:  VSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.4e-1043.01Show/hide
Query:  EAFKNREKDVLVSLSEEGSKYMDGFIKQRLLPTTHVSTVSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP
        E  +NR  +         +K    F+K RLLPTTH  TVS++++LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P
Subjt:  EAFKNREKDVLVSLSEEGSKYMDGFIKQRLLPTTHVSTVSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]7.3e-1234.81Show/hide
Query:  TDEDEGFHVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVST
        TD +E   + VRGV+V WS  AINA+  +        E  +N  +  L+++ E                           +K    F+K RLLPTTH   
Subjt:  TDEDEGFHVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVST

Query:  VSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVPENE
        VS++++LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A    NE
Subjt:  VSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVPENE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.0e-1135.37Show/hide
Query:  VIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVSTVSREQVLL
        V VRGV+V WS  AINA+  +        E  +N  +  L+++ E                           +K    F+K  LLPTTH  TVS++++LL
Subjt:  VIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVSTVSREQVLL

Query:  AFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP
          ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P
Subjt:  AFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP

A0A2P5BCG4 Uncharacterized protein (Fragment)9.3e-1336.13Show/hide
Query:  TDEDEGFHVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVST
        TD +E   V VRGV+V WS  AINA+  +        E  +N  +  L+++ E                           +K    F+K RLLPTTH  T
Subjt:  TDEDEGFHVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVST

Query:  VSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP
        VS++++LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P
Subjt:  VSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP

A0A2P5CEY2 Uncharacterized protein6.7e-1143.01Show/hide
Query:  EAFKNREKDVLVSLSEEGSKYMDGFIKQRLLPTTHVSTVSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP
        E  +NR  +         +K    F+K RLLPTTH  TVS++++LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P
Subjt:  EAFKNREKDVLVSLSEEGSKYMDGFIKQRLLPTTHVSTVSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVP

A0A2P5DXM3 Uncharacterized protein3.6e-1234.81Show/hide
Query:  TDEDEGFHVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVST
        TD +E   + VRGV+V WS  AINA+  +        E  +N  +  L+++ E                           +K    F+K RLLPTTH   
Subjt:  TDEDEGFHVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVLVSLSE-------------------------EGSKYMDGFIKQRLLPTTHVST

Query:  VSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVPENE
        VS++++LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A    NE
Subjt:  VSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVPENE

A0A6A2Y697 Reverse transcriptase domain-containing protein3.9e-1142.86Show/hide
Query:  SKYMDGFIKQRLLPTTHVSTVSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVPENEGDVILFDKGSLVR
        +K  + F+K +L+PT+H +TVS  ++LL  +I+ S  IDVG+II  +++ C  KK   L FPN IT LC++  V EN  D IL    S+ R
Subjt:  SKYMDGFIKQRLLPTTHVSTVSREQVLLAFTILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVPENEGDVILFDKGSLVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAACGAGAGGAAATACAGAGGAGGTTAAAGAAAAACAGACTGAGGATGTGCATGAAGAACATGCAGAGGTTGCGCTTGAAGGAGGTAATGAGCAAGAGCAGGA
GGCTCGAGTAGAGGTGATCATGCCAGAAGTACCCAAACGTCGTCGCATTAAGCGAAAAGCGGGCCGCATCAAGAGAGAGAGGAGCAAGAGAAAAAGAGGCCGAGGAAAAA
GCACGAGAGGAGTAGAGAAAAAGACAGAAGAAGAAAGGTTGCTCAAGCCAAGAGCAGACAGGGGCAACAGTGTTGTTGCAGCATCGGAGGAACCTGACGAACCAGAACAG
CCACAGTTGTCGTATGTTCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCTGAGTCGCTGAAAAGAGATTTCTTGTTTGAAAGAGGATTTAGTGGTACTGACGAGGA
TGAAGGTTTCCATGTTATCGTTCGAGGTGTCGAGGTCGATTGGAGTCCTAGTGCTATTAACGCCCTGGGCGCAGTGGAGGCTTTCAAAAACAGAGAAAAGGACGTTTTAG
TCAGCCTATCTGAAGAGGGAAGCAAATACATGGATGGATTTATCAAACAGAGATTGCTTCCAACGACTCACGTCTCGACGGTTTCTAGGGAACAGGTTCTGTTGGCTTTC
ACGATTTTAAGGTCTCTCAGTATTGATGTGGGCAAGATTATTGCGAGTGAAATATATGGTTGCTGGAAGAAGAAAGTGGGGAAATTGTTTTTCCCGAATACAATCACAAT
GCTTTGCAAGCAAGCAGGGGTTCCGGAGAATGAAGGAGATGTCATATTATTTGACAAGGGATCATTGGTACGCCTAACTTGGCGCTGCTTCAGCGTATGCAAGAGGCACG
CCAGGGTGGGCTTCTTTATGGCATTCACAAGATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAACGAGAGGAAATACAGAGGAGGTTAAAGAAAAACAGACTGAGGATGTGCATGAAGAACATGCAGAGGTTGCGCTTGAAGGAGGTAATGAGCAAGAGCAGGA
GGCTCGAGTAGAGGTGATCATGCCAGAAGTACCCAAACGTCGTCGCATTAAGCGAAAAGCGGGCCGCATCAAGAGAGAGAGGAGCAAGAGAAAAAGAGGCCGAGGAAAAA
GCACGAGAGGAGTAGAGAAAAAGACAGAAGAAGAAAGGTTGCTCAAGCCAAGAGCAGACAGGGGCAACAGTGTTGTTGCAGCATCGGAGGAACCTGACGAACCAGAACAG
CCACAGTTGTCGTATGTTCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCTGAGTCGCTGAAAAGAGATTTCTTGTTTGAAAGAGGATTTAGTGGTACTGACGAGGA
TGAAGGTTTCCATGTTATCGTTCGAGGTGTCGAGGTCGATTGGAGTCCTAGTGCTATTAACGCCCTGGGCGCAGTGGAGGCTTTCAAAAACAGAGAAAAGGACGTTTTAG
TCAGCCTATCTGAAGAGGGAAGCAAATACATGGATGGATTTATCAAACAGAGATTGCTTCCAACGACTCACGTCTCGACGGTTTCTAGGGAACAGGTTCTGTTGGCTTTC
ACGATTTTAAGGTCTCTCAGTATTGATGTGGGCAAGATTATTGCGAGTGAAATATATGGTTGCTGGAAGAAGAAAGTGGGGAAATTGTTTTTCCCGAATACAATCACAAT
GCTTTGCAAGCAAGCAGGGGTTCCGGAGAATGAAGGAGATGTCATATTATTTGACAAGGGATCATTGGTACGCCTAACTTGGCGCTGCTTCAGCGTATGCAAGAGGCACG
CCAGGGTGGGCTTCTTTATGGCATTCACAAGATTATAG
Protein sequenceShow/hide protein sequence
MGRTRGNTEEVKEKQTEDVHEEHAEVALEGGNEQEQEARVEVIMPEVPKRRRIKRKAGRIKRERSKRKRGRGKSTRGVEKKTEEERLLKPRADRGNSVVAASEEPDEPEQ
PQLSYVRFVNNLARAKYAESLKRDFLFERGFSGTDEDEGFHVIVRGVEVDWSPSAINALGAVEAFKNREKDVLVSLSEEGSKYMDGFIKQRLLPTTHVSTVSREQVLLAF
TILRSLSIDVGKIIASEIYGCWKKKVGKLFFPNTITMLCKQAGVPENEGDVILFDKGSLVRLTWRCFSVCKRHARVGFFMAFTRL