| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 1.3e-108 | 35.67 | Show/hide |
Query: PGSTSNSTGFSSPPL--NQLLNQITTIKLDRGADASSSTAPAGGASSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXX
P S S ++ PL + +L I KLD G + P +SS ++ N + W DQ LLGW+ NSMT+E+ATQ++ E K
Subjt: PGSTSNSTGFSSPPL--NQLLNQITTIKLDRGADASSSTAPAGGASSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXX
Query: XXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQN-----------
W+ QSL G +R++ YL+ F RKG KM DYL MK+ D L AG+PV+ +LI Q
Subjt: XXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQN-----------
Query: ----TQKTVVTFNHTTAVNVARNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRG------RGGRGRGYGQYNNSYGNYNNSNRSVCQVCG
+ +T +++ A + SR +N N N+ + +S RG S+ N RG RGGRGRG S ++ CQVCG
Subjt: ----TQKTVVTFNHTTAVNVARNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRG------RGGRGRGYGQYNNSYGNYNNSNRSVCQVCG
Query: KQGHSALVCYHRW--------------------SLFGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD------------------
H A+ C+HR+ + + +V D +WY DSGASNHVT + E+ G + +GNG+
Subjt: KQGHSALVCYHRW--------------------SLFGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD------------------
Query: -----------------------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGN
KDK + +V+LKG LKDGLYQL S T S+ + + + ++VLD V++ C + V +
Subjt: -----------------------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGN
Query: ESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDN
++ SFCEACQ+GK H LPF S++ A++P +LVH+D+WGPAPI++ GF++YV FVDD SRFTW+YPLK+KS+T+ AF F +L + QF+ +IK Q D
Subjt: ESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDN
Query: GGEF----------------------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGS
GGE+ NGRAERKHRH+ E GLTLLAQA MPL YWW+AF A+ +IN LP+ V +SP ++L K+PD+ + FG
Subjt: GGEF----------------------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGS
Query: SCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
+CYPCL+ Y QHK +H+ V+LG+S SHKG+KCLN+ GRIFISR+V FNE FPF
Subjt: SCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
|
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| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 1.7e-28 | 63.64 | Show/hide |
Query: SKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELP
+++ W+ L+ EL KPILWCDNLSA ALA+NPV HAR+KHIEIDVH++RDQVL+ + V YVPT DQIADCLTKPLSH++F+ LR KLGV+ P
Subjt: SKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELP
|
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| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 6.4e-108 | 35.91 | Show/hide |
Query: LLNQITTIKLDRGADASSSTAPAGGASSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXX
+L+ I KLD G ++ P +S+ + VNP + WI DQ LLGWL NSM ++ATQ++ E K
Subjt: LLNQITTIKLDRGADASSSTAPAGGASSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXX
Query: XXXXXXXWEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFN---------------HTTAVN
W+ QSL G +++ YL+ F TRKG KM +YL MK+ SD L AGSP++ +L+ Q +N A
Subjt: XXXXXXXWEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFN---------------HTTAVN
Query: VARNSR-GSFNSNPG--NSKGWNFNNSQRGMNPKSGQRGG---SNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW------
+A SR FN+ G + NF N K RG SNF G RG GRG G+ +N + CQVC GH A+ C +R+
Subjt: VARNSR-GSFNSNPG--NSKGWNFNNSQRGMNPKSGQRGG---SNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW------
Query: -------SLFGNSETVI-------DPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-------------------------------------
G+ I D WY DSGA+NHVT + E+ G + +GNG+
Subjt: -------SLFGNSETVI-------DPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-------------------------------------
Query: ----------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPF
KDK + + LLKG LKDGLYQL + S+ +S + + + ++VLD V+K+CN+ + ++ SFCEACQFGK H LPF
Subjt: ----------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPF
Query: SLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF---------------
S++ ++P L+HSD+WGPAPI+SP GF++YV F+DD SRFTW++PLK+KSDT+ AF F +L + QF+ +IK Q D GGE+
Subjt: SLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF---------------
Query: -------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSE
NGRAERKHRHV E GLTLLAQA MPL YWW+AF A+ +IN LP+ V +SP ++ ++PD+++ + FG +CYPCL+ Y QHK FH+
Subjt: -------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSE
Query: NHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
V++G+S SHKG+KC+N+ GRIF+SR+V FNE FPF
Subjt: NHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
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| GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum] | 3.0e-25 | 63.04 | Show/hide |
Query: LMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELPA
L+ EL KP+LWCDNLSA ALA+NPV HAR+KHIEID+H++RDQVL+ + + YVPTADQIADCLTKPL H++F +R KLGV P+
Subjt: LMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELPA
|
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| GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum] | 8.3e-108 | 35.04 | Show/hide |
Query: SSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYL
+++ ++ NP +E W DQ LLGWL NSMT +ATQ++ E W+ QSL G +R++ YL
Subjt: SSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYL
Query: RQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQ-------------------------NTQKTVVTFNH-----TTAVNVARNSRGSF-N
+ F TRKG KM DYL MK+ +D L AG+P++ +LI Q + Q ++TF + + N+ N+ +
Subjt: RQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQ-------------------------NTQKTVVTFNH-----TTAVNVARNSRGSF-N
Query: SNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW--------------------SL
+ +N NN+ RG N GSNF G RG GRGR + ++ CQVCG H A+ C++R+ +
Subjt: SNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW--------------------SL
Query: FGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-----------------------------------------------------
+ ++ D +WY DSGASNHVT + N E+ G + +GNG+
Subjt: FGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-----------------------------------------------------
Query: KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHS
KDK + + +L+G LKDGLYQL + S+ +S + + + ++VLD V+K CN+ + ++ SFCEACQ+GK H LPF S + AK+ +LVH+
Subjt: KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHS
Query: DLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF----------------------VHNGRAERK
D+WGPAPI+S GF++YV F+DD +RFTW+YPLK+KSDT AF F ++V+ QF +IK Q D GGE+ NGRAERK
Subjt: DLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF----------------------VHNGRAERK
Query: HRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKC
HRH+ E GLTLLAQA MPL YWW+AF A+ +IN LP+ V KSP +L ++PD++S + FG +CYP L+ Y +HK FH+ V+LG+S SHKG+KC
Subjt: HRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKC
Query: LNASGRIFISRNVQFNEQEFPF
+N+ GRIFISR+V FNE FPF
Subjt: LNASGRIFISRNVQFNEQEFPF
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| KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 2.1e-111 | 39.44 | Show/hide |
Query: WEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFN----------HTTAVNVAR---------
WE QSL G +R+ +L+ F +TRKG KM +YL MK +D+L AGS V+ +L++Q +N H T V +
Subjt: WEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFN----------HTTAVNVAR---------
Query: ---NSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW------------
N++ + NP ++ N + N G RGG G RG GRGR +R VCQVC K GH+A CYHR+
Subjt: ---NSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW------------
Query: -------------SLFGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD--------------------------------------
+ + TV D +WY DSGASNHVT D N + E G +T+GNG
Subjt: -------------SLFGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD--------------------------------------
Query: -------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQ---KSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGK
KDK + R+LL+G +KDGLYQL + H ++ + + + + S+VL+ V+K CN+ E+ FCEACQFGK
Subjt: -------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQ---KSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGK
Query: AHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF---------
AHNLPF S + AK+P DLVHSD+WGPAPI S GF++YVLF+DD SRFTW+YPLK+KSD AF F +LV+ QF+ +IK Q D GGEF
Subjt: AHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF---------
Query: -------------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHK
NGRAERKHRHV+E+GLTLLAQA MPL YWW+AF A+ +IN LPT V+ KSP + L +K PD+++ + FG +CYPCL+ Y QHK
Subjt: -------------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHK
Query: FMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
FH+ V+LG+S SHKG+KCLN++GRIFISR+V FNE FPF
Subjt: FMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
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| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 3.1e-110 | 36.22 | Show/hide |
Query: SSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYL
+S T +NP Y+ W DQ LLGWL NSMT ++ATQV+ E K W+ QSL G +R+ YL
Subjt: SSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYL
Query: RQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQN---------------TQKTVVTFNHTTAVNVARNSR----GSFNSNPGNSKGWNFN
+ F T K KM YL MK+ +D L AGSP++ +L+ Q + +T +++ A +A SR +FN+ N+ NF
Subjt: RQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQN---------------TQKTVVTFNHTTAVNVARNSR----GSFNSNPGNSKGWNFN
Query: NSQRGMNPKSGQRGGSNFNGGRG-RGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRWSLF------------GNSETVIDP------NWY
+ K G RGG + RG RGGRGR + R +CQ+CGK GH+A CY+R+ +S V P WY
Subjt: NSQRGMNPKSGQRGGSNFNGGRG-RGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRWSLF------------GNSETVIDP------NWY
Query: ADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-----------------------------------------------------KDKGSDRVLLKGT
DSGASNHVT L + E G + +GNG+ KDK + + LLKG
Subjt: ADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-----------------------------------------------------KDKGSDRVLLKGT
Query: LKDGLYQL----ESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIV
LKDGLYQL E TN + + + + + ++VL+ V+K+ N+ + ++ +FCEACQFGK H LPF S++ AK+P DL+H+D+WGPAPI+
Subjt: LKDGLYQL----ESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIV
Query: SPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF----------------------VHNGRAERKHRHVIETGL
S F++YV F+DD SRFTW++PLK+KS+T+ AF F +LV+ QF+ +IK + D GGE+ NGRAERKHRHV E GL
Subjt: SPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF----------------------VHNGRAERKHRHVIETGL
Query: TLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFI
TLLAQA MPL+YWW+AF A+ +IN LP+ V +SP ++ K+PD+++ + FG +CYPCL+ Y QHK FH+ V+LG+S SHKG+KC+N+ GR+F+
Subjt: TLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFI
Query: SRNVQFNEQEFPFSK
SR+V FNE FPF +
Subjt: SRNVQFNEQEFPFSK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151S6M8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-111 | 39.44 | Show/hide |
Query: WEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFN----------HTTAVNVAR---------
WE QSL G +R+ +L+ F +TRKG KM +YL MK +D+L AGS V+ +L++Q +N H T V +
Subjt: WEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFN----------HTTAVNVAR---------
Query: ---NSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW------------
N++ + NP ++ N + N G RGG G RG GRGR +R VCQVC K GH+A CYHR+
Subjt: ---NSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW------------
Query: -------------SLFGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD--------------------------------------
+ + TV D +WY DSGASNHVT D N + E G +T+GNG
Subjt: -------------SLFGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD--------------------------------------
Query: -------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQ---KSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGK
KDK + R+LL+G +KDGLYQL + H ++ + + + + S+VL+ V+K CN+ E+ FCEACQFGK
Subjt: -------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQ---KSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGK
Query: AHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF---------
AHNLPF S + AK+P DLVHSD+WGPAPI S GF++YVLF+DD SRFTW+YPLK+KSD AF F +LV+ QF+ +IK Q D GGEF
Subjt: AHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF---------
Query: -------------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHK
NGRAERKHRHV+E+GLTLLAQA MPL YWW+AF A+ +IN LPT V+ KSP + L +K PD+++ + FG +CYPCL+ Y QHK
Subjt: -------------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHK
Query: FMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
FH+ V+LG+S SHKG+KCLN++GRIFISR+V FNE FPF
Subjt: FMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 6.2e-109 | 35.67 | Show/hide |
Query: PGSTSNSTGFSSPPL--NQLLNQITTIKLDRGADASSSTAPAGGASSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXX
P S S ++ PL + +L I KLD G + P +SS ++ N + W DQ LLGW+ NSMT+E+ATQ++ E K
Subjt: PGSTSNSTGFSSPPL--NQLLNQITTIKLDRGADASSSTAPAGGASSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXX
Query: XXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQN-----------
W+ QSL G +R++ YL+ F RKG KM DYL MK+ D L AG+PV+ +LI Q
Subjt: XXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQN-----------
Query: ----TQKTVVTFNHTTAVNVARNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRG------RGGRGRGYGQYNNSYGNYNNSNRSVCQVCG
+ +T +++ A + SR +N N N+ + +S RG S+ N RG RGGRGRG S ++ CQVCG
Subjt: ----TQKTVVTFNHTTAVNVARNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRG------RGGRGRGYGQYNNSYGNYNNSNRSVCQVCG
Query: KQGHSALVCYHRW--------------------SLFGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD------------------
H A+ C+HR+ + + +V D +WY DSGASNHVT + E+ G + +GNG+
Subjt: KQGHSALVCYHRW--------------------SLFGNSETVIDPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD------------------
Query: -----------------------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGN
KDK + +V+LKG LKDGLYQL S T S+ + + + ++VLD V++ C + V +
Subjt: -----------------------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGN
Query: ESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDN
++ SFCEACQ+GK H LPF S++ A++P +LVH+D+WGPAPI++ GF++YV FVDD SRFTW+YPLK+KS+T+ AF F +L + QF+ +IK Q D
Subjt: ESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDN
Query: GGEF----------------------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGS
GGE+ NGRAERKHRH+ E GLTLLAQA MPL YWW+AF A+ +IN LP+ V +SP ++L K+PD+ + FG
Subjt: GGEF----------------------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGS
Query: SCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
+CYPCL+ Y QHK +H+ V+LG+S SHKG+KCLN+ GRIFISR+V FNE FPF
Subjt: SCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 8.3e-29 | 63.64 | Show/hide |
Query: SKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELP
+++ W+ L+ EL KPILWCDNLSA ALA+NPV HAR+KHIEIDVH++RDQVL+ + V YVPT DQIADCLTKPLSH++F+ LR KLGV+ P
Subjt: SKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELP
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 3.1e-108 | 35.91 | Show/hide |
Query: LLNQITTIKLDRGADASSSTAPAGGASSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXX
+L+ I KLD G ++ P +S+ + VNP + WI DQ LLGWL NSM ++ATQ++ E K
Subjt: LLNQITTIKLDRGADASSSTAPAGGASSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXX
Query: XXXXXXXWEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFN---------------HTTAVN
W+ QSL G +++ YL+ F TRKG KM +YL MK+ SD L AGSP++ +L+ Q +N A
Subjt: XXXXXXXWEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFN---------------HTTAVN
Query: VARNSR-GSFNSNPG--NSKGWNFNNSQRGMNPKSGQRGG---SNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW------
+A SR FN+ G + NF N K RG SNF G RG GRG G+ +N + CQVC GH A+ C +R+
Subjt: VARNSR-GSFNSNPG--NSKGWNFNNSQRGMNPKSGQRGG---SNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRW------
Query: -------SLFGNSETVI-------DPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-------------------------------------
G+ I D WY DSGA+NHVT + E+ G + +GNG+
Subjt: -------SLFGNSETVI-------DPNWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-------------------------------------
Query: ----------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPF
KDK + + LLKG LKDGLYQL + S+ +S + + + ++VLD V+K+CN+ + ++ SFCEACQFGK H LPF
Subjt: ----------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPF
Query: SLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF---------------
S++ ++P L+HSD+WGPAPI+SP GF++YV F+DD SRFTW++PLK+KSDT+ AF F +L + QF+ +IK Q D GGE+
Subjt: SLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF---------------
Query: -------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSE
NGRAERKHRHV E GLTLLAQA MPL YWW+AF A+ +IN LP+ V +SP ++ ++PD+++ + FG +CYPCL+ Y QHK FH+
Subjt: -------VHNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSE
Query: NHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
V++G+S SHKG+KC+N+ GRIF+SR+V FNE FPF
Subjt: NHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPF
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| A0A2Z6P4D5 Integrase catalytic domain-containing protein | 1.5e-25 | 63.04 | Show/hide |
Query: LMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELPA
L+ EL KP+LWCDNLSA ALA+NPV HAR+KHIEID+H++RDQVL+ + + YVPTADQIADCLTKPL H++F +R KLGV P+
Subjt: LMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELPA
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| A0A803QCY3 Uncharacterized protein | 5.1e-111 | 37.25 | Show/hide |
Query: STTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYLRQ
S T T+NP +E WI DQLL+GWLY+SMT +AT+VMG W A++ L+G S+++ D R
Subjt: STTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYLRQ
Query: IFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFNHTTAVNVARNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGG
+ Q T+KG T M +YLR KS +D+L AG P L + + + + T + + ++ S+ +F + + + G +FN
Subjt: IFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQNTQKTVVTFNHTTAVNVARNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGG
Query: RGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRWSLFGNSETVIDPN----------------------------WYADSGASNHVTGD
RG GGR RG G+ NNS + CQVCGK HSA+VCY+ W F +S DP+ W+ADSGASN++T D
Subjt: RGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRWSLFGNSETVIDPN----------------------------WYADSGASNHVTGD
Query: FNNLINPREYGGNEQVTIGNGD----------------------------------------------------------KDKGSDRVLLKGTLKDGLYQ
+ + +EYGG E+VT+GNGD KD + RVLL+G LKDGLYQ
Subjt: FNNLINPREYGGNEQVTIGNGD----------------------------------------------------------KDKGSDRVLLKGTLKDGLYQ
Query: LESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLF
L++ N + STS+ ++ +CN P + FC+ACQ+GK+H+LPF SN++A K DLVH+DLWGP+PI S F++YV F
Subjt: LESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLF
Query: VDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF----------------------VHNGRAERKHRHVIETGLTLLAQANMPLA
VDD +RFTW+YPLK KS+ AF F SL + QF +IKA ++D GGE+ NGRAERKHRH++E GLTLLAQ+ MPL
Subjt: VDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF----------------------VHNGRAERKHRHVIETGLTLLAQANMPLA
Query: YWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEF
YWWDAF A+ +IN LPTP+L K+P E+L K PD+ + FG +C+PCLR YQ HKF FHS V LG+S +HKG+KCL+ +GRI+I R+V FNE EF
Subjt: YWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEF
Query: PFSKVMWLNQLMNE
PF ++ +LN +E
Subjt: PFSKVMWLNQLMNE
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| A0A803QCY3 Uncharacterized protein | 7.8e-27 | 53.64 | Show/hide |
Query: SKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELPA
+K+ W+ L+ E+G + WCDNL A ALA+NPVFHAR KHIEID+HFVRD+VL+ LEVRY+P++DQ+ADCLTK L+ S+F +L K+G + P
Subjt: SKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELPA
Query: RLRRDIKDKD
RLR D+++ +
Subjt: RLRRDIKDKD
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| A0A803QCY3 Uncharacterized protein | 1.5e-110 | 36.22 | Show/hide |
Query: SSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYL
+S T +NP Y+ W DQ LLGWL NSMT ++ATQV+ E K W+ QSL G +R+ YL
Subjt: SSSTTTMTVNPLYEAWITTDQLLLGWLYNSMTSEVATQVMGFEMQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEAIQSLFGIQSRAEEDYL
Query: RQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQN---------------TQKTVVTFNHTTAVNVARNSR----GSFNSNPGNSKGWNFN
+ F T K KM YL MK+ +D L AGSP++ +L+ Q + +T +++ A +A SR +FN+ N+ NF
Subjt: RQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPVTPRNLISQN---------------TQKTVVTFNHTTAVNVARNSR----GSFNSNPGNSKGWNFN
Query: NSQRGMNPKSGQRGGSNFNGGRG-RGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRWSLF------------GNSETVIDP------NWY
+ K G RGG + RG RGGRGR + R +CQ+CGK GH+A CY+R+ +S V P WY
Subjt: NSQRGMNPKSGQRGGSNFNGGRG-RGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVCYHRWSLF------------GNSETVIDP------NWY
Query: ADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-----------------------------------------------------KDKGSDRVLLKGT
DSGASNHVT L + E G + +GNG+ KDK + + LLKG
Subjt: ADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-----------------------------------------------------KDKGSDRVLLKGT
Query: LKDGLYQL----ESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIV
LKDGLYQL E TN + + + + + ++VL+ V+K+ N+ + ++ +FCEACQFGK H LPF S++ AK+P DL+H+D+WGPAPI+
Subjt: LKDGLYQL----ESATNLPESSMHQSTTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIV
Query: SPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF----------------------VHNGRAERKHRHVIETGL
S F++YV F+DD SRFTW++PLK+KS+T+ AF F +LV+ QF+ +IK + D GGE+ NGRAERKHRHV E GL
Subjt: SPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEF----------------------VHNGRAERKHRHVIETGL
Query: TLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFI
TLLAQA MPL+YWW+AF A+ +IN LP+ V +SP ++ K+PD+++ + FG +CYPCL+ Y QHK FH+ V+LG+S SHKG+KC+N+ GR+F+
Subjt: TLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFI
Query: SRNVQFNEQEFPFSK
SR+V FNE FPF +
Subjt: SRNVQFNEQEFPFSK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 7.0e-25 | 29.59 | Show/hide |
Query: SVSFCEACQFGKAHNLPFSLSNNRA--KKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSD
S CE C GK LPF ++ K+P +VHSD+ GP V+ D ++V+FVD + + Y +K KSD FQ F++ + F+ ++ D
Subjt: SVSFCEACQFGKAHNLPFSLSNNRA--KKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSD
Query: NGGEFVH------------------------NGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVL--GGKSPVEILLNKKPDFSSF
NG E++ NG +ER R + E T+++ A + ++W +A L A +IN +P+ L K+P E+ NKKP
Subjt: NGGEFVH------------------------NGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVL--GGKSPVEILLNKKPDFSSF
Query: RVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFI-SRNVQFNEQEFPFSKVM
RVFG++ Y ++ +Q KF S +++G+ P+ G K +A FI +R+V +E S+ +
Subjt: RVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLNASGRIFI-SRNVQFNEQEFPFSKVM
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| P04146 Copia protein | 1.0e-12 | 36.46 | Show/hide |
Query: KVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVE
+ +WL L+ + + ++ DN ++A NP H R KHI+I HF R+QV + + Y+PT +Q+AD TKPL ++F LR KLG+++
Subjt: KVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGVVE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.9e-32 | 28.79 | Show/hide |
Query: KGSDRVLLKGTLKDGLYQLESATNLPESSMHQ---STTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVH
KGS V+ KG + LY+ + E + Q S + K + + + + L + K+ + +V C+ C FGK H + F S+ R DLV+
Subjt: KGSDRVLLKGTLKDGLYQLESATNLPESSMHQ---STTVTQKSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVH
Query: SDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEFV------------------------HNGRA
SD+ GP I S G +++V F+DD SR W+Y LK K FQ F +LV+ + ++K +SDNGGE+ HNG A
Subjt: SDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEFV------------------------HNGRA
Query: ERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKG
ER +R ++E ++L A +P ++W +A A +IN P+ L + P + NK+ +S +VFG + + + Q+ K S +++G+ G
Subjt: ERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKG
Query: HKCLN-ASGRIFISRNVQFNEQE
++ + ++ SR+V F E E
Subjt: HKCLN-ASGRIFISRNVQFNEQE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-10 | 34.04 | Show/hide |
Query: KVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGV
+++WL + + ELG H + +++CD+ SA L+ N ++HARTKHI++ H++R+ V +L+V + T + AD LTK + ++F + +G+
Subjt: KVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEVRYVPTADQIADCLTKPLSHSQFAYLRSKLGV
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 3.1e-12 | 25.12 | Show/hide |
Query: KSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKA----HNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPL--K
+SI S + +KE ++ N S C C GK+ H L + +PF +H+D++GP + +++ F D+ +RF W+YPL +
Subjt: KSINNSTSRVLDHVIKECNLPVKGNESVSFCEACQFGKA----HNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPL--K
Query: RKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEFVH------------------------NGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQI
R+ L F L+ ++ QF++++ Q D G E+ + +G AER +R ++ TLL + +P W+ A + I
Subjt: RKSDTLLAFQHFLSLVQTQFHSQIKAFQSDNGGEFVH------------------------NGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQI
Query: INGLPTP
N L +P
Subjt: INGLPTP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.2e-66 | 29.58 | Show/hide |
Query: WEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPV----------------------------TPRNLIS-----QNTQKT
WE ++ ++ S LR +Q KG + DY++ + + D L G P+ TP L N +
Subjt: WEAIQSLFGIQSRAEEDYLRQIFQQTRKGNTKMADYLRLMKSHSDNLGQAGSPV----------------------------TPRNLIS-----QNTQKT
Query: VVTFNHTTAVNVA------RNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALV
++ + T + + RN+ + N+N GN ++N N K Q+ +NF+ NN N + CQ+CG QGHSA
Subjt: VVTFNHTTAVNVA------RNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALV
Query: CYHRWSLFG--NSETVIDP-------------------NWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-------------------------
C NS+ P NW DSGA++H+T DFNNL + Y G + V + +G
Subjt: CYHRWSLFG--NSETVIDP-------------------NWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD-------------------------
Query: --------------------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSM-HQSTTVTQKS----INNSTSRVLDHVIKECNLPVK
KD + LL+G KD LY+ A++ P S S+ T S + + +L+ VI +L V
Subjt: --------------------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSM-HQSTTVTQKS----INNSTSRVLDHVIKECNLPVK
Query: GNESVSF--CEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAF
N S F C C K++ +PFS S + +P + ++SD+W +PI+S D +++YV+FVD +R+TWLYPLK+KS F F +L++ +F ++I F
Subjt: GNESVSF--CEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAF
Query: QSDNGGEFV----------------------HNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFR
SDNGGEFV HNG +ERKHRH++ETGLTLL+ A++P YW AF VA+ +IN LPTP+L +SP + L P++ R
Subjt: QSDNGGEFV----------------------HNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFR
Query: VFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLN-ASGRIFISRNVQFNEQEFPFSKVM
VFG +CYP LR Y QHK S V+LG+S + + CL+ + R++ISR+V+F+E FPFS +
Subjt: VFGSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLN-ASGRIFISRNVQFNEQEFPFSKVM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-24 | 43.7 | Show/hide |
Query: VYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPFSKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEV
VYLG P K G + S ++ S++ W+ L+ ELG + P+++CDN+ A L ANPVFH+R KHI ID HF+R+QV GAL V
Subjt: VYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPFSKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEV
Query: RYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELP
+V T DQ+AD LTKPLS + F SK+GV +P
Subjt: RYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.1e-61 | 30.66 | Show/hide |
Query: NTQKTVVTFNHTTAVNVARNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVC
N + ++ N V + N N+N N N + RG N N+N R + + S CQ+C QGHSA C
Subjt: NTQKTVVTFNHTTAVNVARNSRGSFNSNPGNSKGWNFNNSQRGMNPKSGQRGGSNFNGGRGRGGRGRGYGQYNNSYGNYNNSNRSVCQVCGKQGHSALVC
Query: --YHRWSLFGNSETVIDP-------------------NWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD--------------------------
H++ N + P NW DSGA++H+T DFNNL + Y G + V I +G
Subjt: --YHRWSLFGNSETVIDP-------------------NWYADSGASNHVTGDFNNLINPREYGGNEQVTIGNGD--------------------------
Query: -------------------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKS-----INNSTSRVLDHVIKECNLPV-K
KD + LL+G KD LY+ A++ S + S + + + +L+ VI +LPV
Subjt: -------------------------------KDKGSDRVLLKGTLKDGLYQLESATNLPESSMHQSTTVTQKS-----INNSTSRVLDHVIKECNLPV-K
Query: GNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQS
+ + C C K+H +PFS S + KP + ++SD+W +PI+S D +++YV+FVD +R+TWLYPLK+KS F F SLV+ +F ++I S
Subjt: GNESVSFCEACQFGKAHNLPFSLSNNRAKKPFDLVHSDLWGPAPIVSPDGFQFYVLFVDDHSRFTWLYPLKRKSDTLLAFQHFLSLVQTQFHSQIKAFQS
Query: DNGGEFV----------------------HNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVF
DNGGEFV HNG +ERKHRH++E GLTLL+ A++P YW AF VA+ +IN LPTP+L +SP + L + P++ +VF
Subjt: DNGGEFV----------------------HNGRAERKHRHVIETGLTLLAQANMPLAYWWDAFLVAIQIINGLPTPVLGGKSPVEILLNKKPDFSSFRVF
Query: GSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLN-ASGRIFISRNVQFNEQEFPFS
G +CYP LR Y +HK S+ ++G+S + + CL+ +GR++ SR+VQF+E+ FPFS
Subjt: GSSCYPCLRQYQQHKFMFHSENHVYLGFSPSHKGHKCLN-ASGRIFISRNVQFNEQEFPFS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.5e-24 | 42.96 | Show/hide |
Query: VYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPFSKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEV
VYLG P K G + S ++ S++ W+ L+ ELG S P+++CDN+ A L ANPVFH+R KHI +D HF+R+QV GAL V
Subjt: VYLGFSPSHKGHKCLNASGRIFISRNVQFNEQEFPFSKVMWLNQLMNELGCHSSSKPILWCDNLSAGALAANPVFHARTKHIEIDVHFVRDQVLKGALEV
Query: RYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELP
+V T DQ+AD LTKPLS F K+GV+++P
Subjt: RYVPTADQIADCLTKPLSHSQFAYLRSKLGVVELP
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