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Lag0005614 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005614
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr6:23821045..23821587
RNA-Seq ExpressionLag0005614
SyntenyLag0005614
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]5.5e-1636.41Show/hide
Query:  DFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAITA
        D +G+ +AI+CR F FTLTGSTR WF++LKR+SIS                             KQ+  ESL+DY+ RFN E LQ EG   A   +   +
Subjt:  DFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAITA

Query:  GLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSER----EYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF
        G++DE+L+ S GK    T++   SRAQ YMS  EL+ S R  +    +Y        + +   R    + G+GR  Q D  +KF
Subjt:  GLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSER----EYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]2.1e-1541.36Show/hide
Query:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGY-RASSPIAIT
        MD +GV +A+KCR F  TL+GS R WF +LKR SIS                             KQ+  ESL DY+ RFN+E LQ EG   A S +A  
Subjt:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGY-RASSPIAIT

Query:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQ
        + + DE L  S GK  P T++  +SRAQKYMS  E   S R E E K+ S  N +   DK Q
Subjt:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQ

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.5e-1839.46Show/hide
Query:  DFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAITA
        D + + +AI+CR F FTLTGS R+WF +LKR SIS                             KQ+  ESL++Y+ RFN+E LQ EG   A + IA  +
Subjt:  DFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAITA

Query:  GLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRS-EREYKRFSSSNYDSKKDKRQRT----DEGGRGRPNQGDYLKKF
        G++DERL+ S GK  P T+   +SRAQKYMS  EL+  +R  ERE   +S+   + + +KR R+     + G GR  Q D   KF
Subjt:  GLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRS-EREYKRFSSSNYDSKKDKRQRT----DEGGRGRPNQGDYLKKF

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.2e-1639.23Show/hide
Query:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAIT
        MD +GV +A++CR F  TL GS R WF +LKR SIS                             KQ+  ESLRDY+ RFN+E LQ EG   A S +A  
Subjt:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAIT

Query:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF
        +G+ DE L  S GK  P T++  +SRAQ+YMS  E   S R E + KR +    +   DK Q +    R R +Q D  +KF
Subjt:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.7e-1539.23Show/hide
Query:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAIT
        MD +GV DAI+CR F  TL GS R WF +LKR SIS                             KQ+  ESL DY+ RFN+E LQ EG   A S +A  
Subjt:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAIT

Query:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF
        +G+ DE L  S  K  P T++  +SRAQ+YMS  E   S R E + KR +    +   DK Q +    R R +Q D  +KF
Subjt:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166192.6e-1636.41Show/hide
Query:  DFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAITA
        D +G+ +AI+CR F FTLTGSTR WF++LKR+SIS                             KQ+  ESL+DY+ RFN E LQ EG   A   +   +
Subjt:  DFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAITA

Query:  GLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSER----EYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF
        G++DE+L+ S GK    T++   SRAQ YMS  EL+ S R  +    +Y        + +   R    + G+GR  Q D  +KF
Subjt:  GLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSER----EYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF

A0A6J1D7D2 uncharacterized protein LOC1110183071.0e-1541.36Show/hide
Query:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGY-RASSPIAIT
        MD +GV +A+KCR F  TL+GS R WF +LKR SIS                             KQ+  ESL DY+ RFN+E LQ EG   A S +A  
Subjt:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGY-RASSPIAIT

Query:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQ
        + + DE L  S GK  P T++  +SRAQKYMS  E   S R E E K+ S  N +   DK Q
Subjt:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQ

A0A6J1DWY0 uncharacterized protein LOC1110252932.0e-1639.23Show/hide
Query:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAIT
        MD +GV +A++CR F  TL GS R WF +LKR SIS                             KQ+  ESLRDY+ RFN+E LQ EG   A S +A  
Subjt:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAIT

Query:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF
        +G+ DE L  S GK  P T++  +SRAQ+YMS  E   S R E + KR +    +   DK Q +    R R +Q D  +KF
Subjt:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF

A0A6J1DZ49 uncharacterized protein LOC1110248517.4e-1939.46Show/hide
Query:  DFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAITA
        D + + +AI+CR F FTLTGS R+WF +LKR SIS                             KQ+  ESL++Y+ RFN+E LQ EG   A + IA  +
Subjt:  DFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAITA

Query:  GLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRS-EREYKRFSSSNYDSKKDKRQRT----DEGGRGRPNQGDYLKKF
        G++DERL+ S GK  P T+   +SRAQKYMS  EL+  +R  ERE   +S+   + + +KR R+     + G GR  Q D   KF
Subjt:  GLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRS-EREYKRFSSSNYDSKKDKRQRT----DEGGRGRPNQGDYLKKF

A0A6J1E1E7 uncharacterized protein LOC1110255481.3e-1539.23Show/hide
Query:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAIT
        MD +GV DAI+CR F  TL GS R WF +LKR SIS                             KQ+  ESL DY+ RFN+E LQ EG   A S +A  
Subjt:  MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSIS----------------------------FKQQPGESLRDYITRFNDEALQAEGYR-ASSPIAIT

Query:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF
        +G+ DE L  S  K  P T++  +SRAQ+YMS  E   S R E + KR +    +   DK Q +    R R +Q D  +KF
Subjt:  AGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKSTRSEREYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCCACGGTGTCCCAGATGCAATCAAGTGCCGCGCATTCTTTTTCACTCTGACAGGATCAACCAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTT
CAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTACAGGCTGAGGGGTACAGGGCTAGCAGCCCTATAGCCATAACAGCCGGAC
TAGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCGGCGTTTGTATCCCGGGCACAGAAGTATATGAGCAGAGAGGAGTTACTGAAATCA
ACGAGGTCAGAACGAGAGTACAAGAGGTTTTCTTCATCTAACTACGACAGTAAAAAGGACAAAAGGCAGCGGACTGATGAGGGAGGCCGAGGCCGACCAAACCAAGGAGA
CTACTTGAAGAAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCCACGGTGTCCCAGATGCAATCAAGTGCCGCGCATTCTTTTTCACTCTGACAGGATCAACCAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTT
CAAACAGCAGCCAGGTGAGAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTACAGGCTGAGGGGTACAGGGCTAGCAGCCCTATAGCCATAACAGCCGGAC
TAGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCGGCGTTTGTATCCCGGGCACAGAAGTATATGAGCAGAGAGGAGTTACTGAAATCA
ACGAGGTCAGAACGAGAGTACAAGAGGTTTTCTTCATCTAACTACGACAGTAAAAAGGACAAAAGGCAGCGGACTGATGAGGGAGGCCGAGGCCGACCAAACCAAGGAGA
CTACTTGAAGAAGTTTTAA
Protein sequenceShow/hide protein sequence
MDFHGVPDAIKCRAFFFTLTGSTRHWFERLKRRSISFKQQPGESLRDYITRFNDEALQAEGYRASSPIAITAGLEDERLLNSIGKSQPRTYAAFVSRAQKYMSREELLKS
TRSEREYKRFSSSNYDSKKDKRQRTDEGGRGRPNQGDYLKKF