; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005619 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005619
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr6:23959430..23963084
RNA-Seq ExpressionLag0005619
SyntenyLag0005619
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]2.3e-3347.78Show/hide
Query:  LIPKHLVFPDALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENA
        L P  +V    + +RFL KFF P KT +LR++IG F+Q   E L+EAWERYKDLIR+CPQHG PDW         L   T+TI+DAA+GGTL+SKT E A
Subjt:  LIPKHLVFPDALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENA

Query:  RTLLEDMATNSYQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIE--SATAIASQSQEEATEQV
          LLE+MA+N+YQWP++R+  KKVA G+ E++ ++AL AQ+++L++           QS E  ++T++   S E + EQV
Subjt:  RTLLEDMATNSYQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIE--SATAIASQSQEEATEQV

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]2.3e-3347.78Show/hide
Query:  LIPKHLVFPDALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENA
        L P  +V    + +RFL KFF P KT +LR++IG F+Q   E L+EAWERYKDLIR+CPQHG PDW         L   T+TI+DAA+GGTL+SKT E A
Subjt:  LIPKHLVFPDALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENA

Query:  RTLLEDMATNSYQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIE--SATAIASQSQEEATEQV
          LLE+MA+N+YQWP++R+  KKVA G+ E++ ++AL AQ+++L++           QS E  ++T++   S E + EQV
Subjt:  RTLLEDMATNSYQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIE--SATAIASQSQEEATEQV

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]4.5e-3750.58Show/hide
Query:  PKHLVFPDALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENART
        P  +   + L Q FL K+F P K+ +LRT+IGTF+Q  DEQL+EAWERYKDL+R+CPQHGYPDW         L  STK+I+DA  GG++ SK  + A T
Subjt:  PKHLVFPDALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENART

Query:  LLEDMATNSYQWPSKRSTPK-KVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQ----SIESATAIASQ
        +LED+AT SY WP +R++P    A G++E+D V++L+AQM+SL NA  K    G AQ    SI S  A+AS+
Subjt:  LLEDMATNSYQWPSKRSTPK-KVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQ----SIESATAIASQ

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]4.6e-3453.05Show/hide
Query:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMATNS
        +VQ FL  FF P KT +LRT+I +F++   EQLFE WERYK+L+RKCPQHG  +W         L   T+TI+DAA GGTLLS+T ENA  LL+DMA NS
Subjt:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMATNS

Query:  YQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIESATAIASQSQEEAT
        +QWPS+RS  KKVA G++EID +S+L+AQ+ +L NA  K  G G++ S E   A  + S  E T
Subjt:  YQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIESATAIASQSQEEAT

XP_022866538.1 uncharacterized protein LOC111386305 [Olea europaea var. sylvestris]1.8e-3349.12Show/hide
Query:  DALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMAT
        + L ++FL KFF P+K  +LR++IG F+Q   E  +EAWERYKDL R+CPQHGY DW         L   T+ ++D+A GG LLSKT   A  LL+++AT
Subjt:  DALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMAT

Query:  NSYQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIES--ATAIASQSQEEATEQV
        NSYQWPS+RS+ KKVA G++E+D ++ L AQMSSL N  +     GS +  ES  AT+ A Q  E   EQ+
Subjt:  NSYQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIES--ATAIASQSQEEATEQV

TrEMBL top hitse value%identityAlignment
A0A2I4FP56 uncharacterized protein LOC1090008376.3e-2945.18Show/hide
Query:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDWL------TPSTKTIIDAATGGTLLSKTVENARTLLEDMATNSYQW
        + ++FL KFF P KT +L+++IG  +Q   E L++AWERYKDLIR CPQHG PDWL         T+T +DA +GG L+SKT E    LLE+MA+++YQW
Subjt:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDWL------TPSTKTIIDAATGGTLLSKTVENARTLLEDMATNSYQW

Query:  PSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIE--SATAIASQSQEEATEQV
        P+KR+  KKVA G+ E++ ++A+ AQ+++L++     +     QS E  +AT++   S E + EQV
Subjt:  PSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIE--SATAIASQSQEEATEQV

A0A3S3N117 Retrotrans_gag domain-containing protein1.5e-3054.41Show/hide
Query:  DALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMAT
        D L ++FL KFF PTKTVK+R  I TF Q   E L+EAWERYK+L+RKCP HG P W         L  +T+T IDAATGGTL+ K+ E A  L+E+MAT
Subjt:  DALVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMAT

Query:  NSYQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLA
        N+YQWPS     KK+  GV E+D++SAL AQ+++L+
Subjt:  NSYQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLA

A0A6J0ZYV0 uncharacterized protein LOC1104134134.1e-2849.32Show/hide
Query:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDWLTPST---------KTIIDAATGGTLLSKTVENARTLLEDMATNS
        L Q+FL KFF P KT K+R  I +F Q   E L+EAWER+K+L+R+CP HG PDWL   T         KTIIDAA GG L+SK   +A  LLE+MA+N+
Subjt:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDWLTPST---------KTIIDAATGGTLLSKTVENARTLLEDMATNS

Query:  YQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQS
        YQWPS+RS  +K A+G +EID +  L  Q+++L+   L  LG  + Q+
Subjt:  YQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQS

A0A6J1DU19 uncharacterized protein LOC1110243612.2e-3453.05Show/hide
Query:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMATNS
        +VQ FL  FF P KT +LRT+I +F++   EQLFE WERYK+L+RKCPQHG  +W         L   T+TI+DAA GGTLLS+T ENA  LL+DMA NS
Subjt:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMATNS

Query:  YQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIESATAIASQSQEEAT
        +QWPS+RS  KKVA G++EID +S+L+AQ+ +L NA  K  G G++ S E   A  + S  E T
Subjt:  YQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIESATAIASQSQEEAT

A0A6P9E7J9 uncharacterized protein LOC1183442388.2e-2946.15Show/hide
Query:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMATNS
        + ++FL KFF P KT +LR++I  F+Q   E L+EA ERYKDLIR CPQHG PDW         L   T+TI+D ATGGTL+SKT+E A  LLE+MA+N+
Subjt:  LVQRFLKKFFTPTKTVKLRTKIGTFQQRFDEQLFEAWERYKDLIRKCPQHGYPDW---------LTPSTKTIIDAATGGTLLSKTVENARTLLEDMATNS

Query:  YQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIE--SATAIASQSQEEATEQV
         QWP++R+  KK+ +G+ E+++++AL AQ ++L++           QS E   AT++   S E + EQV
Subjt:  YQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSAQSIE--SATAIASQSQEEATEQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTCATCTATGTTTTACCTAGATGGGAAGGTTCAGCTGCTGACTCAAGAGTTTTACGAGATGTTGTATCTAGGAGGAATGGATTAAAAATTCCAAAAGATATGGA
TGATAACGAACAATCTAAAGCTGGTTCAAGTAGGAAAAGCATGTGGAGTAAGGCAGAAGATGAGAAATTAGTGGAATGTTTAATAGAGCTATCTAATATTGACACTTGGA
AAGCTGATAACGAGTCATCCAACTGCAAAGGGACTCAAAACAAGCCTTTTCCATTCTTTGAACAATTAGCCATTGTTTTTGGGAAAGATAGGGCCAATGGACTTGGTGCA
GAAGGTCCAACTGATATGTTTGAAGCAGTGGAACGAGAAATGACCGACAATGAATTTTGTAGAGGAGACAACTCTTATGTGCCTACTCCATCAATAGTTGGAGGGGAAGA
AGTGGATGAACGAACCTTAATGAGTGAAGCACCAATAAATACACAATCTACTGCACATACATCGAATAGGTCTAGTAAGAAAAGAGCAAAGAGTGTGGATCCATTGGTAG
CGGCAGTGAATGAACTTGAGAATGTTATGAGCAGTCATCTTTCAAATGCTAATGAAAATATTCAAGAGATTGCTTTGTTTTATCGACAAGTAGTTGAACGAGAATCTACA
AGAGAGGAACGTCGAAACTCATTAGTTAGTGAAATTAGAAAGGTGGATGGATTGAGTGTTCGACAAAGAGTTCGAGCTGGTAAGCTTATCACCAAAGATCAATCCCAGAT
TGATTACTTCTTTAATCTTCCAACTGATGAAAGGAAATGTGATGACATTCCCTGGCACAACCAAACACAGTTATCTTTGATTCCCAGGCATATTATTCCCAGACATCTTA
TTCCCAAGCATCTTGTATTCCCAGATGCTTTGGTCCAGAGATTTTTAAAGAAATTCTTCACTCCTACAAAGACGGTCAAGCTGAGGACCAAAATTGGGACGTTTCAGCAA
CGGTTCGATGAACAACTGTTCGAGGCTTGGGAACGCTACAAGGATCTTATAAGGAAATGTCCTCAACATGGATACCCTGACTGGTTAACTCCTAGTACTAAAACCATAAT
TGATGCAGCTACAGGTGGGACTCTGTTGTCCAAGACCGTAGAGAATGCACGAACCTTACTGGAGGACATGGCCACAAACAGCTACCAGTGGCCATCTAAACGGTCCACAC
CAAAGAAAGTGGCAATCGGGGTGTTTGAGATCGATAATGTAAGTGCTTTACAAGCCCAGATGTCTTCCCTTGCTAATGCTTTCTTAAAATTTTTAGGTACAGGGAGCGCA
CAATCTATCGAGTCAGCTACTGCCATCGCATCCCAGTCTCAGGAGGAGGCCACAGAACAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAATTCATCTATGTTTTACCTAGATGGGAAGGTTCAGCTGCTGACTCAAGAGTTTTACGAGATGTTGTATCTAGGAGGAATGGATTAAAAATTCCAAAAGATATGGA
TGATAACGAACAATCTAAAGCTGGTTCAAGTAGGAAAAGCATGTGGAGTAAGGCAGAAGATGAGAAATTAGTGGAATGTTTAATAGAGCTATCTAATATTGACACTTGGA
AAGCTGATAACGAGTCATCCAACTGCAAAGGGACTCAAAACAAGCCTTTTCCATTCTTTGAACAATTAGCCATTGTTTTTGGGAAAGATAGGGCCAATGGACTTGGTGCA
GAAGGTCCAACTGATATGTTTGAAGCAGTGGAACGAGAAATGACCGACAATGAATTTTGTAGAGGAGACAACTCTTATGTGCCTACTCCATCAATAGTTGGAGGGGAAGA
AGTGGATGAACGAACCTTAATGAGTGAAGCACCAATAAATACACAATCTACTGCACATACATCGAATAGGTCTAGTAAGAAAAGAGCAAAGAGTGTGGATCCATTGGTAG
CGGCAGTGAATGAACTTGAGAATGTTATGAGCAGTCATCTTTCAAATGCTAATGAAAATATTCAAGAGATTGCTTTGTTTTATCGACAAGTAGTTGAACGAGAATCTACA
AGAGAGGAACGTCGAAACTCATTAGTTAGTGAAATTAGAAAGGTGGATGGATTGAGTGTTCGACAAAGAGTTCGAGCTGGTAAGCTTATCACCAAAGATCAATCCCAGAT
TGATTACTTCTTTAATCTTCCAACTGATGAAAGGAAATGTGATGACATTCCCTGGCACAACCAAACACAGTTATCTTTGATTCCCAGGCATATTATTCCCAGACATCTTA
TTCCCAAGCATCTTGTATTCCCAGATGCTTTGGTCCAGAGATTTTTAAAGAAATTCTTCACTCCTACAAAGACGGTCAAGCTGAGGACCAAAATTGGGACGTTTCAGCAA
CGGTTCGATGAACAACTGTTCGAGGCTTGGGAACGCTACAAGGATCTTATAAGGAAATGTCCTCAACATGGATACCCTGACTGGTTAACTCCTAGTACTAAAACCATAAT
TGATGCAGCTACAGGTGGGACTCTGTTGTCCAAGACCGTAGAGAATGCACGAACCTTACTGGAGGACATGGCCACAAACAGCTACCAGTGGCCATCTAAACGGTCCACAC
CAAAGAAAGTGGCAATCGGGGTGTTTGAGATCGATAATGTAAGTGCTTTACAAGCCCAGATGTCTTCCCTTGCTAATGCTTTCTTAAAATTTTTAGGTACAGGGAGCGCA
CAATCTATCGAGTCAGCTACTGCCATCGCATCCCAGTCTCAGGAGGAGGCCACAGAACAGGTTTAG
Protein sequenceShow/hide protein sequence
MQFIYVLPRWEGSAADSRVLRDVVSRRNGLKIPKDMDDNEQSKAGSSRKSMWSKAEDEKLVECLIELSNIDTWKADNESSNCKGTQNKPFPFFEQLAIVFGKDRANGLGA
EGPTDMFEAVEREMTDNEFCRGDNSYVPTPSIVGGEEVDERTLMSEAPINTQSTAHTSNRSSKKRAKSVDPLVAAVNELENVMSSHLSNANENIQEIALFYRQVVEREST
REERRNSLVSEIRKVDGLSVRQRVRAGKLITKDQSQIDYFFNLPTDERKCDDIPWHNQTQLSLIPRHIIPRHLIPKHLVFPDALVQRFLKKFFTPTKTVKLRTKIGTFQQ
RFDEQLFEAWERYKDLIRKCPQHGYPDWLTPSTKTIIDAATGGTLLSKTVENARTLLEDMATNSYQWPSKRSTPKKVAIGVFEIDNVSALQAQMSSLANAFLKFLGTGSA
QSIESATAIASQSQEEATEQV