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Lag0005636 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005636
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr6:24598061..24598630
RNA-Seq ExpressionLag0005636
SyntenyLag0005636
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.0e-3546.03Show/hide
Query:  MDMLISHLKAAKTDPIAVATVVSHVTGICSMASSVNSLANRWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFI
        M +L +HL+AA T PI  AT ++H +GI ++ S  N   + WIIDSGAS HICH+KS F NW H + M V+LP  +++ V+ +G++ I+ SL L  VLF+
Subjt:  MDMLISHLKAAKTDPIAVATVVSHVTGICSMASSVNSLANRWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFI

Query:  PDFGYNLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSE---SSAPKVSSPVCSVSSAVWHSRLGHLSPKRLNLL
          F YNL+SVS LL   +IS+ F +T CIIQD     MIGKA C +GL +L++   ++       + ++S   WH RLGHLSPK L+ L
Subjt:  PDFGYNLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSE---SSAPKVSSPVCSVSSAVWHSRLGHLSPKRLNLL

KZV36180.1 hypothetical protein F511_26362, partial [Dorcoceras hygrometricum]1.4e-2137.63Show/hide
Query:  HLKAAKTDPIAVATVVSHVTGICSMASSVNSLANR-WIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGY
        H    + +P    + +S +TGICS  S +  +A   W++D+GA+HHIC + S F +   ++   + LP T+ + V  VG+VI+++ L+LH VL++P F +
Subjt:  HLKAAKTDPIAVATVVSHVTGICSMASSVNSLANR-WIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGY

Query:  NLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSVSSA---VWHSRLGHLSPKRLNLLKD
        NL+SVS L      SV F+   C IQD +   MIG       L +L +S     +S +C+VS +   +WH R+GH SP RL+ LKD
Subjt:  NLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSVSSA---VWHSRLGHLSPKRLNLLKD

KZV37633.1 hypothetical protein F511_38248 [Dorcoceras hygrometricum]6.3e-2238.12Show/hide
Query:  DPIAVATVVSHVTGICSMASSVNSLANR-WIIDSGASHHICHNKSAFCNWHHIDPMS--VILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVSV
        +P      +S +TGICS  S  +S+    W++D+GA+HHIC + S F   H + P+S  ++LP T  + V  +G+V ++  L+LH VL++P+F +NL+S+
Subjt:  DPIAVATVVSHVTGICSMASSVNSLANR-WIIDSGASHHICHNKSAFCNWHHIDPMS--VILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVSV

Query:  SGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSVS---SAVWHSRLGHLSPKRLNLLKD
        S L    + SV F+   C IQD +   MIG       L +L +S     +S VC+ S   S +WH R+GH SP +L+ LKD
Subjt:  SGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSVS---SAVWHSRLGHLSPKRLNLLKD

XP_012857659.1 PREDICTED: uncharacterized protein LOC105976934 [Erythranthe guttata]7.2e-2642.13Show/hide
Query:  KTDPIAVATVVSHVTGIC--SMASSVNSLANRWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVS
        K   I   + +S VTGIC  +   + + + + WI+DSGAS HICHNKS F N   +    V+LP +  VLV  +G+V ++  LVLH V ++P+F +NLVS
Subjt:  KTDPIAVATVVSHVTGIC--SMASSVNSLANRWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVS

Query:  VSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCS-VSSAVWHSRLGHLSPKRLNLL
        VS LL  S   V+F      IQD RL+T IGK +   GL +L   SA  +    C+ +S+ VWH RLGH+   +L  L
Subjt:  VSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCS-VSSAVWHSRLGHLSPKRLNLL

XP_019420691.1 PREDICTED: uncharacterized protein LOC109330875 [Lupinus angustifolius]2.0e-2337.36Show/hide
Query:  HVTGICSMASSVNSLANR-----WIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVSVSGLLQASD
        H         S+NSL+++     WI+DSGA+ H+CH+ S + N+  I P+ + LP   +V   + G ++ S+ L L  VL++P F +NLVS+S L  +  
Subjt:  HVTGICSMASSVNSLANR-----WIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVSVSGLLQASD

Query:  ISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSV-----SSAVWHSRLGHLSPKRLNLLK
         ++ FSN  C IQD + L MIG A+   GL +LS+SS     S   ++      S +WHSRLGHLS K++ +++
Subjt:  ISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSV-----SSAVWHSRLGHLSPKRLNLLK

TrEMBL top hitse value%identityAlignment
A0A151TJ88 Retrotrans_gag domain-containing protein1.7e-2037.36Show/hide
Query:  PIAVATVVSH-VTGICSMASSVNSLAN--RWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVSVS
        P    ++V++ VT  C+  S+  S  N   W+IDSGA+ HI  + S F ++  I+P+ V LPT  +VL  + G V  +D+  L  VLFIPDF +NL+S+S
Subjt:  PIAVATVVSH-VTGICSMASSVNSLAN--RWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVSVS

Query:  GLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLS-----ESSAPKVSSPVCSVSSA-VWHSRLGHLSPKRLNLLK
         L+ + D+ ++F +T C+IQD +    IG  D + GL  ++      S    V +P CS+ S  +WH R+GHL  ++L+ +K
Subjt:  GLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLS-----ESSAPKVSSPVCSVSSA-VWHSRLGHLSPKRLNLLK

A0A2Z7BSS5 Integrase catalytic domain-containing protein3.1e-2238.12Show/hide
Query:  DPIAVATVVSHVTGICSMASSVNSLANR-WIIDSGASHHICHNKSAFCNWHHIDPMS--VILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVSV
        +P      +S +TGICS  S  +S+    W++D+GA+HHIC + S F   H + P+S  ++LP T  + V  +G+V ++  L+LH VL++P+F +NL+S+
Subjt:  DPIAVATVVSHVTGICSMASSVNSLANR-WIIDSGASHHICHNKSAFCNWHHIDPMS--VILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVSV

Query:  SGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSVS---SAVWHSRLGHLSPKRLNLLKD
        S L    + SV F+   C IQD +   MIG       L +L +S     +S VC+ S   S +WH R+GH SP +L+ LKD
Subjt:  SGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSVS---SAVWHSRLGHLSPKRLNLLKD

A0A2Z7BVC8 Integrase catalytic domain-containing protein (Fragment)6.8e-2237.63Show/hide
Query:  HLKAAKTDPIAVATVVSHVTGICSMASSVNSLANR-WIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGY
        H    + +P    + +S +TGICS  S +  +A   W++D+GA+HHIC + S F +   ++   + LP T+ + V  VG+VI+++ L+LH VL++P F +
Subjt:  HLKAAKTDPIAVATVVSHVTGICSMASSVNSLANR-WIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGY

Query:  NLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSVSSA---VWHSRLGHLSPKRLNLLKD
        NL+SVS L      SV F+   C IQD +   MIG       L +L +S     +S +C+VS +   +WH R+GH SP RL+ LKD
Subjt:  NLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSVSSA---VWHSRLGHLSPKRLNLLKD

A0A392LXD3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-2036.76Show/hide
Query:  SHLKAAKTDPIAVATVVSHVTGICSMA---SSVNSLANRWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPD
        S+  A+ ++P  V  V  H +GI  +A   S ++S  + WIIDSGAS HIC + + F ++H IDP+ V +        +  G V  S    LH VL + D
Subjt:  SHLKAAKTDPIAVATVVSHVTGICSMA---SSVNSLANRWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPD

Query:  FGYNLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSES------------------SAPKVSSPVCSV-SSAVWHSRLGHLSPKRL
        F +NL+SVS L   S   VLF    C IQ+K  L MIG  +  +GL  L  S                    P  ++  CS+ S A+WH R GHLS KRL
Subjt:  FGYNLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSES------------------SAPKVSSPVCSV-SSAVWHSRLGHLSPKRL

Query:  NLLK
          +K
Subjt:  NLLK

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 84.9e-3646.03Show/hide
Query:  MDMLISHLKAAKTDPIAVATVVSHVTGICSMASSVNSLANRWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFI
        M +L +HL+AA T PI  AT ++H +GI ++ S  N   + WIIDSGAS HICH+KS F NW H + M V+LP  +++ V+ +G++ I+ SL L  VLF+
Subjt:  MDMLISHLKAAKTDPIAVATVVSHVTGICSMASSVNSLANRWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFI

Query:  PDFGYNLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSE---SSAPKVSSPVCSVSSAVWHSRLGHLSPKRLNLL
          F YNL+SVS LL   +IS+ F +T CIIQD     MIGKA C +GL +L++   ++       + ++S   WH RLGHLSPK L+ L
Subjt:  PDFGYNLVSVSGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSE---SSAPKVSSPVCSVSSAVWHSRLGHLSPKRLNLL

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.6e-0729.49Show/hide
Query:  ANRWIIDSGASHHICHNKSAFCNWHHIDPMS----VILPTTYKVLVEYVGNVIISDS---LVLHVVLFIPDFGYNLVSVSGLLQASDISVLFSNTECIIQ
        +N W++DSGA+HHI    S F N     P +    V++     + + + G+  +S     L LH +L++P+   NL+SV  L  A+ +SV F      ++
Subjt:  ANRWIIDSGASHHICHNKSAFCNWHHIDPMS----VILPTTYKVLVEYVGNVIISDS---LVLHVVLFIPDFGYNLVSVSGLLQASDISVLFSNTECIIQ

Query:  DKR--LLTMIGKA-DCHHGLNLLSESSAPKVSSPVCSVSSAVWHSRLGHLSPKRLN
        D    +  + GK  D  +   + S       +SP    + + WH+RLGH +P  LN
Subjt:  DKR--LLTMIGKA-DCHHGLNLLSESSAPKVSSPVCSVSSAVWHSRLGHLSPKRLN

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.5e-0730.77Show/hide
Query:  ANRWIIDSGASHHICHNKSAFCNWHHIDPMS----VILPTTYKVLVEYVGNVII---SDSLVLHVVLFIPDFGYNLVSVSGLLQASDISVLFSNTECIIQ
        AN W++DSGA+HHI    S F N     P +    V++     + + + G+  +   S SL L+ VL++P+   NL+SV  L   + +SV F      ++
Subjt:  ANRWIIDSGASHHICHNKSAFCNWHHIDPMS----VILPTTYKVLVEYVGNVII---SDSLVLHVVLFIPDFGYNLVSVSGLLQASDISVLFSNTECIIQ

Query:  DKR--LLTMIGKA-DCHHGLNLLSESSAPKVSSPVCSVSSAVWHSRLGHLSPKRLN
        D    +  + GK  D  +   + S  +    +SP    + + WHSRLGH S   LN
Subjt:  DKR--LLTMIGKA-DCHHGLNLLSESSAPKVSSPVCSVSSAVWHSRLGHLSPKRLN

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGCTGATTTCTCATCTTAAGGCTGCGAAAACAGATCCTATTGCTGTGGCTACTGTTGTTTCACATGTAACAGGTATTTGCTCTATGGCCTCTTCTGTTAATTC
CCTTGCTAATCGATGGATTATCGACTCTGGGGCATCTCACCACATCTGTCATAATAAGTCTGCTTTCTGTAATTGGCATCACATTGATCCCATGTCTGTTATATTGCCTA
CCACTTACAAAGTTCTTGTTGAATATGTTGGTAATGTTATCATTTCTGATTCATTGGTTCTTCATGTTGTCTTGTTCATCCCGGATTTTGGTTACAACTTGGTATCTGTC
AGCGGCCTACTACAAGCCTCAGATATTTCTGTTTTGTTTTCTAATACTGAATGCATCATACAGGACAAACGTCTATTAACAATGATTGGCAAGGCTGATTGTCATCATGG
TCTTAACCTGCTTTCTGAGTCCTCGGCACCTAAGGTTTCTAGTCCTGTATGTTCAGTTTCTTCTGCTGTTTGGCACAGTCGTTTAGGGCATTTATCACCTAAACGTTTAA
ACTTGTTGAAAGATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATGCTGATTTCTCATCTTAAGGCTGCGAAAACAGATCCTATTGCTGTGGCTACTGTTGTTTCACATGTAACAGGTATTTGCTCTATGGCCTCTTCTGTTAATTC
CCTTGCTAATCGATGGATTATCGACTCTGGGGCATCTCACCACATCTGTCATAATAAGTCTGCTTTCTGTAATTGGCATCACATTGATCCCATGTCTGTTATATTGCCTA
CCACTTACAAAGTTCTTGTTGAATATGTTGGTAATGTTATCATTTCTGATTCATTGGTTCTTCATGTTGTCTTGTTCATCCCGGATTTTGGTTACAACTTGGTATCTGTC
AGCGGCCTACTACAAGCCTCAGATATTTCTGTTTTGTTTTCTAATACTGAATGCATCATACAGGACAAACGTCTATTAACAATGATTGGCAAGGCTGATTGTCATCATGG
TCTTAACCTGCTTTCTGAGTCCTCGGCACCTAAGGTTTCTAGTCCTGTATGTTCAGTTTCTTCTGCTGTTTGGCACAGTCGTTTAGGGCATTTATCACCTAAACGTTTAA
ACTTGTTGAAAGATGCTTAA
Protein sequenceShow/hide protein sequence
MDMLISHLKAAKTDPIAVATVVSHVTGICSMASSVNSLANRWIIDSGASHHICHNKSAFCNWHHIDPMSVILPTTYKVLVEYVGNVIISDSLVLHVVLFIPDFGYNLVSV
SGLLQASDISVLFSNTECIIQDKRLLTMIGKADCHHGLNLLSESSAPKVSSPVCSVSSAVWHSRLGHLSPKRLNLLKDA