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Lag0005642 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005642
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr6:24729781..24731194
RNA-Seq ExpressionLag0005642
SyntenyLag0005642
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1322405.1 unnamed protein product [Sepia pharaonis]3.8e-0442.68Show/hide
Query:  PSHLASGSDQPMIQAEFRMVTCSSHLASGSDQPLIQVEFRMVTCH---SHLASGSDQPLIQAEFRMITRPSHLASGSDQPPI
        PSHL S SD P I          +HL S SD P I   F  +TC+   SHL S S  P I         PSHL S SD P I
Subjt:  PSHLASGSDQPMIQAEFRMVTCSSHLASGSDQPLIQVEFRMVTCH---SHLASGSDQPLIQAEFRMITRPSHLASGSDQPPI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGACCGTCAGACCCATGGTCCACCGCTATCTTGTGTGTTTGTTATGAGCCGCCGTCGGGGAAGAAGAATCGAGAGGAGGCTTACCGGCTATTTGGTAGAGCGGA
ACGAGGCCATCAACTGCCACCGACTTTGAAGATGGAGCGGAACGAGCCCGTCAACTGTCAACATTTGATGGAGCGAGGCCGAAGCCGTCAACCGCCAACATTTGAAGATG
GAGAGAAGTCGAAGCTGTCAACCGTCGACTTTGGAGATGAAGCGGAACGAGGCAGAATTCAGGATGGTCTCTCGCCCTCACATCTTGCCTCAGGCAGTGATCAACCCATG
ATTCAGGCGGAATTCAGGATGGTCACTTGTTCTTCACATCTTGCCTCAGGCAGTGATCAACCTCTGATTCAGGTGGAATTCAGGATGGTCACTTGCCATTCACATCTTGC
CTCAGGAAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGATCACTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCCGATTCAGGCAGAATGCAGGCTGG
TCACTTGCCCACTTGCACCGCCAACCTTTGAAGATGAAGCGAGGCTAAAGCTGTCAACCACCAACATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGACCGTCAGACCCATGGTCCACCGCTATCTTGTGTGTTTGTTATGAGCCGCCGTCGGGGAAGAAGAATCGAGAGGAGGCTTACCGGCTATTTGGTAGAGCGGA
ACGAGGCCATCAACTGCCACCGACTTTGAAGATGGAGCGGAACGAGCCCGTCAACTGTCAACATTTGATGGAGCGAGGCCGAAGCCGTCAACCGCCAACATTTGAAGATG
GAGAGAAGTCGAAGCTGTCAACCGTCGACTTTGGAGATGAAGCGGAACGAGGCAGAATTCAGGATGGTCTCTCGCCCTCACATCTTGCCTCAGGCAGTGATCAACCCATG
ATTCAGGCGGAATTCAGGATGGTCACTTGTTCTTCACATCTTGCCTCAGGCAGTGATCAACCTCTGATTCAGGTGGAATTCAGGATGGTCACTTGCCATTCACATCTTGC
CTCAGGAAGTGATCAACCCCTGATTCAGGCGGAATTCAGGATGATCACTCGCCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCCGATTCAGGCAGAATGCAGGCTGG
TCACTTGCCCACTTGCACCGCCAACCTTTGAAGATGAAGCGAGGCTAAAGCTGTCAACCACCAACATTTGA
Protein sequenceShow/hide protein sequence
MSRPSDPWSTAILCVCYEPPSGKKNREEAYRLFGRAERGHQLPPTLKMERNEPVNCQHLMERGRSRQPPTFEDGEKSKLSTVDFGDEAERGRIQDGLSPSHLASGSDQPM
IQAEFRMVTCSSHLASGSDQPLIQVEFRMVTCHSHLASGSDQPLIQAEFRMITRPSHLASGSDQPPIQAECRLVTCPLAPPTFEDEARLKLSTTNI