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Lag0005650 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005650
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr6:25059220..25060221
RNA-Seq ExpressionLag0005650
SyntenyLag0005650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON32444.1 hypothetical protein PanWU01x14_361130 [Parasponia andersonii]5.9e-0839.13Show/hide
Query:  FVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEALKLVANKG
        FV++VI Q  W++FCAHP++ +VPLVREFYA L D       VRG  V +S   IN VY +  P++   ++ I + +  ++   L+ +A  G
Subjt:  FVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEALKLVANKG

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]8.0e-1332.65Show/hide
Query:  KGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPL--------NPRGNDVIR--
        KGF    S+ +G LP F+++VI Q  W++FCAHP++ +VPLVREFYA L D   +   VRG  VS+S   IN V+ +  P+        N   +D+I   
Subjt:  KGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPL--------NPRGNDVIR--

Query:  -------------------------NPSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL
                                  P+AK     LK                      ++  K INVG +I  EI AC  ++   LFF SLIT+L
Subjt:  -------------------------NPSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.7e-1331.98Show/hide
Query:  KGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRN---------
        KGF    S+ +G LP F+++VI Q  W++FCAHP++ +VPLVREFYA L D   +   VRG  VS+S   IN V+ +  P++   ++ I+N         
Subjt:  KGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRN---------

Query:  ---------------------------PSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL
                                   P+AK     LK                      ++  K INVG +I  EI AC  ++   LFF SLIT+L
Subjt:  ---------------------------PSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]8.3e-1028.02Show/hide
Query:  PEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRG---NDVIR---------------------
        P F++ VI Q  WQ FCAHP++ +VPLVREFY  + +       +RG  V  S   IN ++ +  P++       D+ +                     
Subjt:  PEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRG---NDVIR---------------------

Query:  -----------NPSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL
                   NP AK     LK                      ++  K INVG +I  EI AC  +++  LFF SLIT +
Subjt:  -----------NPSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]1.2e-0834.45Show/hide
Query:  EIMKKRDFLNGKGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVI
        E ++K+     KGF    S+ +G  P F+++VI Q  W++FCAHP++ +VPLVREFYA L D       VRG  V ++   IN V+ +  P++   ++ +
Subjt:  EIMKKRDFLNGKGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVI

Query:  RNPSAKQMKEALKLVANKG
         + + +++   L+ VA  G
Subjt:  RNPSAKQMKEALKLVANKG

TrEMBL top hitse value%identityAlignment
A0A2P5A7C9 Uncharacterized protein2.9e-0839.13Show/hide
Query:  FVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEALKLVANKG
        FV++VI Q  W++FCAHP++ +VPLVREFYA L D       VRG  V +S   IN VY +  P++   ++ I + +  ++   L+ +A  G
Subjt:  FVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEALKLVANKG

A0A2P5AGA5 Uncharacterized protein (Fragment)3.9e-1332.65Show/hide
Query:  KGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPL--------NPRGNDVIR--
        KGF    S+ +G LP F+++VI Q  W++FCAHP++ +VPLVREFYA L D   +   VRG  VS+S   IN V+ +  P+        N   +D+I   
Subjt:  KGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPL--------NPRGNDVIR--

Query:  -------------------------NPSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL
                                  P+AK     LK                      ++  K INVG +I  EI AC  ++   LFF SLIT+L
Subjt:  -------------------------NPSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL

A0A2P5BCG4 Uncharacterized protein (Fragment)2.3e-1331.98Show/hide
Query:  KGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRN---------
        KGF    S+ +G LP F+++VI Q  W++FCAHP++ +VPLVREFYA L D   +   VRG  VS+S   IN V+ +  P++   ++ I+N         
Subjt:  KGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRN---------

Query:  ---------------------------PSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL
                                   P+AK     LK                      ++  K INVG +I  EI AC  ++   LFF SLIT+L
Subjt:  ---------------------------PSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL

A0A2P5DAQ2 Uncharacterized protein4.0e-1028.02Show/hide
Query:  PEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRG---NDVIR---------------------
        P F++ VI Q  WQ FCAHP++ +VPLVREFY  + +       +RG  V  S   IN ++ +  P++       D+ +                     
Subjt:  PEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRG---NDVIR---------------------

Query:  -----------NPSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL
                   NP AK     LK                      ++  K INVG +I  EI AC  +++  LFF SLIT +
Subjt:  -----------NPSAKQMKEALK----------------------LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQL

A0A2P5EK98 Uncharacterized protein (Fragment)5.8e-0934.45Show/hide
Query:  EIMKKRDFLNGKGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVI
        E ++K+     KGF    S+ +G  P F+++VI Q  W++FCAHP++ +VPLVREFYA L D       VRG  V ++   IN V+ +  P++   ++ +
Subjt:  EIMKKRDFLNGKGF----SDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVI

Query:  RNPSAKQMKEALKLVANKG
         + + +++   L+ VA  G
Subjt:  RNPSAKQMKEALKLVANKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCATGAAGAAAAGAGATTTCCTCAACGGGAAGGGATTCTCTGACCGAGTAGGAGCACTACCAGAGTTCGTAAGTAGAGTTATCTTCCAGTGCAAGTGGCAGGA
GTTTTGTGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTTCGTGAATTTTACGCTGGTCTGAGGGATGAGAGTATTAGCAAGGCGGTAGTGAGGGGGAAGATGGTCAGTT
TCTCCTCAGTCGACATCAACAGGGTGTACAGGATCAAGGCACCCTTGAACCCAAGAGGGAATGATGTGATCAGGAACCCTTCGGCCAAGCAAATGAAGGAAGCTTTGAAG
CTTGTGGCCAATAAAGGGATCAACGTAGGGAGCATCATCAGGGATGAAATCTTAGCCTGTGGACAGAAAAGGGCAGACAAGCTTTTCTTTAGCTCACTCATCACCCAACT
CTATCAAAGGCTTGATCGAATCAGGGAGAACCTGAAGACATACTGGACTTATGCCAAGGAGAGGGATGAAGCTATTAGAGAGTTCTATCTCTCTATTGCCTCAAGCATTG
CACCGGTCTTTCCAAATTTCCCTCAGTCGCTGCTGCCCCAGGAAGAAGAGGATTCTGATGAAGAGGAATATGAAGAGAATGAAGAGAAAGAGAGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCATGAAGAAAAGAGATTTCCTCAACGGGAAGGGATTCTCTGACCGAGTAGGAGCACTACCAGAGTTCGTAAGTAGAGTTATCTTCCAGTGCAAGTGGCAGGA
GTTTTGTGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTTCGTGAATTTTACGCTGGTCTGAGGGATGAGAGTATTAGCAAGGCGGTAGTGAGGGGGAAGATGGTCAGTT
TCTCCTCAGTCGACATCAACAGGGTGTACAGGATCAAGGCACCCTTGAACCCAAGAGGGAATGATGTGATCAGGAACCCTTCGGCCAAGCAAATGAAGGAAGCTTTGAAG
CTTGTGGCCAATAAAGGGATCAACGTAGGGAGCATCATCAGGGATGAAATCTTAGCCTGTGGACAGAAAAGGGCAGACAAGCTTTTCTTTAGCTCACTCATCACCCAACT
CTATCAAAGGCTTGATCGAATCAGGGAGAACCTGAAGACATACTGGACTTATGCCAAGGAGAGGGATGAAGCTATTAGAGAGTTCTATCTCTCTATTGCCTCAAGCATTG
CACCGGTCTTTCCAAATTTCCCTCAGTCGCTGCTGCCCCAGGAAGAAGAGGATTCTGATGAAGAGGAATATGAAGAGAATGAAGAGAAAGAGAGTTCTTAG
Protein sequenceShow/hide protein sequence
MEIMKKRDFLNGKGFSDRVGALPEFVSRVIFQCKWQEFCAHPQEAVVPLVREFYAGLRDESISKAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEALK
LVANKGINVGSIIRDEILACGQKRADKLFFSSLITQLYQRLDRIRENLKTYWTYAKERDEAIREFYLSIASSIAPVFPNFPQSLLPQEEEDSDEEEYEENEEKESS