; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005699 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005699
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr6:26505240..26508609
RNA-Seq ExpressionLag0005699
SyntenyLag0005699
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW15385.1 putative ribonuclease H protein [Vitis vinifera]3.2e-0730.81Show/hide
Query:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE
        P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G ++L + F+ LY + S++N TV++VLG+     S++F F R L D E
Subjt:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE

Query:  TADIMTLLSLLERV----------------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV
           +  L+S L  V                      K P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Subjt:  TADIMTLLSLLERV----------------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV

RVW43468.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.0e-0833.52Show/hide
Query:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE
        P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G ++L S F+ LY + S+KN TV++VLG+     S++F F R L D E
Subjt:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE

Query:  TADIMTLLSLLERV-------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV
           +  L+S L  V             K P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Subjt:  TADIMTLLSLLERV-------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV

RVX05721.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]4.2e-0726.64Show/hide
Query:  LDRGLHSWVALVEKLSVVQLGNDEHQIHWSL----EEFGAYSSKSILKSLFTRTNKNLNTDDRLQRKFSNGSLL------PSGSSLHVVVRWGQRHLQES
        LD    ++++L  +++++Q    +H + W +    +E G    + I         K L    R +    +  ++      P+G   ++VVRW  R   ++
Subjt:  LDRGLHSWVALVEKLSVVQLGNDEHQIHWSL----EEFGAYSSKSILKSLFTRTNKNLNTDDRLQRKFSNGSLL------PSGSSLHVVVRWGQRHLQES

Query:  LERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERVK-----
        + +     S F  V+ +VG+G  I F      G +SL S F+ LY + S+KN TV++VLG+     +++  F R L D E   +  L+S L  V+     
Subjt:  LERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERVK-----

Query:  -----------APKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV
                    P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Subjt:  -----------APKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV

RVX09324.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]5.0e-0834.13Show/hide
Query:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE
        P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G +SL S F  LY + S+KN TV++VLG+     +++  F R L D E
Subjt:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE

Query:  TADIMTLLSLLERV----KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV
           +  L+S L +     K P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Subjt:  TADIMTLLSLLERV----KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]1.5e-0953.95Show/hide
Query:  IVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLE
        ++  G+   F+G  LGG R L  LF  LYHLSS+KN  +AD L   GNS SFSFGF R L DRET++++ L+SLLE
Subjt:  IVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLE

TrEMBL top hitse value%identityAlignment
A0A438BWL9 Putative ribonuclease H protein1.6e-0730.81Show/hide
Query:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE
        P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G ++L + F+ LY + S++N TV++VLG+     S++F F R L D E
Subjt:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE

Query:  TADIMTLLSLLERV----------------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV
           +  L+S L  V                      K P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Subjt:  TADIMTLLSLLERV----------------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV

A0A438E711 LINE-1 retrotransposable element ORF2 protein4.9e-0933.52Show/hide
Query:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE
        P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G ++L S F+ LY + S+KN TV++VLG+     S++F F R L D E
Subjt:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE

Query:  TADIMTLLSLLERV-------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV
           +  L+S L  V             K P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Subjt:  TADIMTLLSLLERV-------------KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV

A0A438J9S5 Transposon TX1 uncharacterized 149 kDa protein2.0e-0726.64Show/hide
Query:  LDRGLHSWVALVEKLSVVQLGNDEHQIHWSL----EEFGAYSSKSILKSLFTRTNKNLNTDDRLQRKFSNGSLL------PSGSSLHVVVRWGQRHLQES
        LD    ++++L  +++++Q    +H + W +    +E G    + I         K L    R +    +  ++      P+G   ++VVRW  R   ++
Subjt:  LDRGLHSWVALVEKLSVVQLGNDEHQIHWSL----EEFGAYSSKSILKSLFTRTNKNLNTDDRLQRKFSNGSLL------PSGSSLHVVVRWGQRHLQES

Query:  LERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERVK-----
        + +     S F  V+ +VG+G  I F      G +SL S F+ LY + S+KN TV++VLG+     +++  F R L D E   +  L+S L  V+     
Subjt:  LERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLERVK-----

Query:  -----------APKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV
                    P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Subjt:  -----------APKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV

A0A438JK46 LINE-1 retrotransposable element ORF2 protein2.4e-0834.13Show/hide
Query:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE
        P+G   ++VVRW  R   +++ +     S F  V+ +VG+G  I F      G +SL S F  LY + S+KN TV++VLG+     +++  F R L D E
Subjt:  PSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRE

Query:  TADIMTLLSLLERV----KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV
           +  L+S L +     K P KV    W V  G+V T D+L  R     + P  CILC KG+   +
Subjt:  TADIMTLLSLLERV----KAPKKVLFFVWQVTLGRVYTFDRLS-RVKAPVVGPFCCILCWKGDDRGV

A0A5D3CI74 Calpain-type cysteine protease DEK17.5e-1053.95Show/hide
Query:  IVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLE
        ++  G+   F+G  LGG R L  LF  LYHLSS+KN  +AD L   GNS SFSFGF R L DRET++++ L+SLLE
Subjt:  IVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFSFGFLRPLFDRETADIMTLLSLLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTTCCACCGGAACCCCTGCATTTGGAGCCCTTTTCCTTGAACTTTATTTTATTCAACTAGAGAGCCAACCGTCTTTGTATAGTGGTTGTCTTTATTCCCTTCC
CTGTGCCACTAGATTGCTTGGACTTTATGACATCAAATTATATGAGATTAATGTAAAGCTCAGACGAGGTCTTCTTGACAGAGGATTACATAGTTGGGTGGCCTTAGTGG
AAAAGCTTAGTGTGGTGCAATTGGGTAATGACGAGCATCAAATTCATTGGTCCCTTGAGGAATTTGGAGCTTACTCTAGCAAATCAATTTTAAAATCTCTCTTTACTAGA
ACAAACAAGAACCTAAACACGGATGATAGACTTCAAAGGAAATTTTCGAATGGGTCCCTCTTGCCCTCAGGATCATCCCTTCATGTGGTTGTTAGATGGGGTCAAAGGCA
CCTTCAAGAATCCTTGGAAAGACATATCTTTGGAGCTTCCCTCTTTCTCTTAGTCCAATGCATAGTGGGTGATGGGAGATGCATTTTTTTTCTGGGAGGATTTTTGGGTG
GGGGTCGTTCCCTCTACTCCTTGTTCTCGCGTCTATATCATTTATCATCAATGAAAAATCGCACTGTGGCTGATGTCCTTGGATCCGTGGGGAATTCCACCTCCTTTTCC
TTTGGTTTTCTTCGTCCGTTATTTGATAGAGAAACCGCAGACATCATGACCCTCTTATCCCTGCTTGAGAGGGTTAAAGCTCCAAAGAAAGTTCTGTTCTTCGTTTGGCA
GGTCACCTTGGGTCGTGTTTACACTTTTGATAGGCTTTCGAGAGTGAAGGCCCCTGTGGTTGGCCCTTTCTGTTGCATTCTATGTTGGAAGGGAGATGATCGAGGAGTTC
CTCCTCCATCTGCTGTTTCGGGAGAAGGGAAGGTTCTTTTGGCATGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTTTCCACCGGAACCCCTGCATTTGGAGCCCTTTTCCTTGAACTTTATTTTATTCAACTAGAGAGCCAACCGTCTTTGTATAGTGGTTGTCTTTATTCCCTTCC
CTGTGCCACTAGATTGCTTGGACTTTATGACATCAAATTATATGAGATTAATGTAAAGCTCAGACGAGGTCTTCTTGACAGAGGATTACATAGTTGGGTGGCCTTAGTGG
AAAAGCTTAGTGTGGTGCAATTGGGTAATGACGAGCATCAAATTCATTGGTCCCTTGAGGAATTTGGAGCTTACTCTAGCAAATCAATTTTAAAATCTCTCTTTACTAGA
ACAAACAAGAACCTAAACACGGATGATAGACTTCAAAGGAAATTTTCGAATGGGTCCCTCTTGCCCTCAGGATCATCCCTTCATGTGGTTGTTAGATGGGGTCAAAGGCA
CCTTCAAGAATCCTTGGAAAGACATATCTTTGGAGCTTCCCTCTTTCTCTTAGTCCAATGCATAGTGGGTGATGGGAGATGCATTTTTTTTCTGGGAGGATTTTTGGGTG
GGGGTCGTTCCCTCTACTCCTTGTTCTCGCGTCTATATCATTTATCATCAATGAAAAATCGCACTGTGGCTGATGTCCTTGGATCCGTGGGGAATTCCACCTCCTTTTCC
TTTGGTTTTCTTCGTCCGTTATTTGATAGAGAAACCGCAGACATCATGACCCTCTTATCCCTGCTTGAGAGGGTTAAAGCTCCAAAGAAAGTTCTGTTCTTCGTTTGGCA
GGTCACCTTGGGTCGTGTTTACACTTTTGATAGGCTTTCGAGAGTGAAGGCCCCTGTGGTTGGCCCTTTCTGTTGCATTCTATGTTGGAAGGGAGATGATCGAGGAGTTC
CTCCTCCATCTGCTGTTTCGGGAGAAGGGAAGGTTCTTTTGGCATGCTAA
Protein sequenceShow/hide protein sequence
MAFSTGTPAFGALFLELYFIQLESQPSLYSGCLYSLPCATRLLGLYDIKLYEINVKLRRGLLDRGLHSWVALVEKLSVVQLGNDEHQIHWSLEEFGAYSSKSILKSLFTR
TNKNLNTDDRLQRKFSNGSLLPSGSSLHVVVRWGQRHLQESLERHIFGASLFLLVQCIVGDGRCIFFLGGFLGGGRSLYSLFSRLYHLSSMKNRTVADVLGSVGNSTSFS
FGFLRPLFDRETADIMTLLSLLERVKAPKKVLFFVWQVTLGRVYTFDRLSRVKAPVVGPFCCILCWKGDDRGVPPPSAVSGEGKVLLAC