; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005711 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005711
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase
Genome locationchr6:26931487..26936074
RNA-Seq ExpressionLag0005711
SyntenyLag0005711
Gene Ontology termsNA
InterPro domainsIPR025724 - GAG-pre-integrase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039947.1 integrase [Cucumis melo var. makuwa]8.4e-1538.24Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        +TGDN +L+VKG+GDILVKTK G KR+T V++VP LKH          +  +  F                                          KD 
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN
        SWLWH+RYGHL+F +LS++C+ HMVRG+ NI  E N
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN

KAA0060377.1 integrase [Cucumis melo var. makuwa]8.4e-1538.24Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        +TGDN +L+VKG+GDILVKTK G KR+T V++VP LKH          +  +  F                                          KD 
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN
        SWLWH+RYGHL+F +LS++C+ HMVRG+ NI  E N
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN

TYJ95504.1 integrase [Cucumis melo var. makuwa]8.4e-1538.24Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        +TGDN +L+VKG+GDILVKTK G KR+T V++VP LKH          +  +  F                                          KD 
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN
        SWLWH+RYGHL+F +LS++C+ HMVRG+ NI  E N
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN

TYK30104.1 integrase [Cucumis melo var. makuwa]8.4e-1538.24Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        +TGDN +L+VKG+GDILVKTK G KR+T V++VP LKH          +  +  F                                          KD 
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN
        SWLWH+RYGHL+F +LS++C+ HMVRG+ NI  E N
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN

XP_038904397.1 uncharacterized protein LOC120090760 [Benincasa hispida]2.9e-1541.13Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        ++GDNK LEVKG+GDILVKT NGAKRIT +Y+   LK           K  +  F +                                        KDT
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDNTRSSY
         WLWH +YG+LSFDTLSHM QQ MVRGMP+I+KE+    +Y
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDNTRSSY

TrEMBL top hitse value%identityAlignment
A0A5A7UZJ8 Integrase4.1e-1538.24Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        +TGDN +L+VKG+GDILVKTK G KR+T V++VP LKH          +  +  F                                          KD 
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN
        SWLWH+RYGHL+F +LS++C+ HMVRG+ NI  E N
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN

A0A5D3BQ81 Integrase4.1e-1538.24Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        +TGDN +L+VKG+GDILVKTK G KR+T V++VP LKH          +  +  F                                          KD 
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN
        SWLWH+RYGHL+F +LS++C+ HMVRG+ NI  E N
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN

A0A5D3CLV1 Integrase4.1e-1538.24Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        +TGDN +L+VKG+GDILVKTK G KR+T V++VP LKH          +  +  F                                          KD 
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN
        SWLWH+RYGHL+F +LS++C+ HMVRG+ NI  E N
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN

A0A5D3CXM6 Integrase4.1e-1538.24Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        +TGDN +L+VKG+GDILVKTK G KR+T V++VP LKH          +  +  F                                          KD 
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN
        SWLWH+RYGHL+F +LS++C+ HMVRG+ NI  E N
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN

A0A5D3E3T2 Integrase4.1e-1538.24Show/hide
Query:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT
        +TGDN +L+VKG+GDILVKTK G KR+T V++VP LKH          +  +  F                                          KD 
Subjt:  RTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKH----------KNQEWRFHN----------------------------------------KDT

Query:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN
        SWLWH+RYGHL+F +LS++C+ HMVRG+ NI  E N
Subjt:  SWLWHYRYGHLSFDTLSHMCQQHMVRGMPNIQKEDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGCTGGTTGGACCAGAAATAGGTTGTTCATTAGAGGAGCACTGTTACCAGAAATAGGGCGTGCAGTTAT
CCTCCTGATCGATAGAGTCCTTTTCCAGAAAAAATCCTTAGAGTTTTCGGCTCCCACAAGCTCTCAACGTGTACTCCCATTGAGAATACCGGTGCAATCAAGTGGTAGTG
TTCGTGGTGTCTTTTCCAGCGAAAACAAGGATCGCTTGCTGCTGTTTTTGGGAGCAATTTGGAGAAAATTTGGCGAAACGATCAAGAGTTTCTTCAAAGACTTCTCCCTA
ACATATTCACCCCCTAGGGTTGTCATACCGATCCAACAAATGGTATCAGAGCAAGGAAAGAGTCGATTAGAGCTAAAACGTGGATTACCAGTTAATCGGACTGGTGACAA
TAAGAAGCTCGAAGTTAAAGGAAGAGGAGATATCCTTGTTAAGACAAAGAATGGAGCAAAAAGAATCACTGGTGTATATTTTGTTCCAAGTCTTAAACACAAGAACCAAG
AATGGAGGTTTCATAACAAAGATACTTCATGGCTTTGGCATTATCGATATGGACACTTGAGTTTTGACACTTTATCGCACATGTGTCAACAACATATGGTGAGAGGAATG
CCAAACATTCAAAAGGAAGATAACACTAGGAGTTCATATGCTGCTGCATTAGCATCTAGACCTCAGGAGGAGACCATTGAACAGTCAAGTAACAGGACAACCAAGTTAGA
GAAGGCAGTCATTGCCATCAACTCAATAGTGAATGGCCACAGTGCTGCCATCAAGAACATTGAGACTCAGCTGGGACAGTTGGTAAGTGTTGTAAGCACCATGAATAAAG
GTAAGGCCCCAGCTGAGCAGGAGAAAACCCAGATGGAGTACTGTAAAGCAATCACTGTGCACCAGGAGGAAGCTGAAAAGGAGCTTGAGTCTGAGGATTATGACACGTTG
TTGGGCTCCTTGATATTATTAGCGGATTCCTCCCGAAACTCCGGATCTTTTGGGATATGTTTCAAACCCAATGAAGAGCGACCGATCAAGCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTACCCTCTTTATGGCACGAGAGGGATTTCTGTTTGCTGGTTGGACCAGAAATAGGTTGTTCATTAGAGGAGCACTGTTACCAGAAATAGGGCGTGCAGTTAT
CCTCCTGATCGATAGAGTCCTTTTCCAGAAAAAATCCTTAGAGTTTTCGGCTCCCACAAGCTCTCAACGTGTACTCCCATTGAGAATACCGGTGCAATCAAGTGGTAGTG
TTCGTGGTGTCTTTTCCAGCGAAAACAAGGATCGCTTGCTGCTGTTTTTGGGAGCAATTTGGAGAAAATTTGGCGAAACGATCAAGAGTTTCTTCAAAGACTTCTCCCTA
ACATATTCACCCCCTAGGGTTGTCATACCGATCCAACAAATGGTATCAGAGCAAGGAAAGAGTCGATTAGAGCTAAAACGTGGATTACCAGTTAATCGGACTGGTGACAA
TAAGAAGCTCGAAGTTAAAGGAAGAGGAGATATCCTTGTTAAGACAAAGAATGGAGCAAAAAGAATCACTGGTGTATATTTTGTTCCAAGTCTTAAACACAAGAACCAAG
AATGGAGGTTTCATAACAAAGATACTTCATGGCTTTGGCATTATCGATATGGACACTTGAGTTTTGACACTTTATCGCACATGTGTCAACAACATATGGTGAGAGGAATG
CCAAACATTCAAAAGGAAGATAACACTAGGAGTTCATATGCTGCTGCATTAGCATCTAGACCTCAGGAGGAGACCATTGAACAGTCAAGTAACAGGACAACCAAGTTAGA
GAAGGCAGTCATTGCCATCAACTCAATAGTGAATGGCCACAGTGCTGCCATCAAGAACATTGAGACTCAGCTGGGACAGTTGGTAAGTGTTGTAAGCACCATGAATAAAG
GTAAGGCCCCAGCTGAGCAGGAGAAAACCCAGATGGAGTACTGTAAAGCAATCACTGTGCACCAGGAGGAAGCTGAAAAGGAGCTTGAGTCTGAGGATTATGACACGTTG
TTGGGCTCCTTGATATTATTAGCGGATTCCTCCCGAAACTCCGGATCTTTTGGGATATGTTTCAAACCCAATGAAGAGCGACCGATCAAGCACTAG
Protein sequenceShow/hide protein sequence
MGPTLFMAREGFLFAGWTRNRLFIRGALLPEIGRAVILLIDRVLFQKKSLEFSAPTSSQRVLPLRIPVQSSGSVRGVFSSENKDRLLLFLGAIWRKFGETIKSFFKDFSL
TYSPPRVVIPIQQMVSEQGKSRLELKRGLPVNRTGDNKKLEVKGRGDILVKTKNGAKRITGVYFVPSLKHKNQEWRFHNKDTSWLWHYRYGHLSFDTLSHMCQQHMVRGM
PNIQKEDNTRSSYAAALASRPQEETIEQSSNRTTKLEKAVIAINSIVNGHSAAIKNIETQLGQLVSVVSTMNKGKAPAEQEKTQMEYCKAITVHQEEAEKELESEDYDTL
LGSLILLADSSRNSGSFGICFKPNEERPIKH