; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005736 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005736
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr6:27512667..27513163
RNA-Seq ExpressionLag0005736
SyntenyLag0005736
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.2e-0932.62Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRRFWLSKNQLLHHLESNKEYNCRI-LYGPMKLKFYEERSMGFLLFEFQIRACDLEGT
        +++PR+KGYV+ +V+K+F  IE+GV+P IP++ ET R+LN+                       CRI ++ P                 F    C+LE  
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRRFWLSKNQLLHHLESNKEYNCRI-LYGPMKLKFYEERSMGFLLFEFQIRACDLEGT

Query:  LDAPKSLNLKMRELPHSSSSRPL-GCVHYAPLLALRQSWFK
        LDA KS +  + ++ +  + R + G + Y+PLL LRQSW K
Subjt:  LDAPKSLNLKMRELPHSSSSRPL-GCVHYAPLLALRQSWFK

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]2.8e-0629.37Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYF----PRRFWLSKNQLLHHLESNKEYNCRILYGPMKLKFYEERSMGFLLFEFQIRACDL
        V++PR+KGYV+ +V+K+F  IE+GV+P IP++AET R+LN+       +F+     L   + S+  Y                 + G+   +F       
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYF----PRRFWLSKNQLLHHLESNKEYNCRILYGPMKLKFYEERSMGFLLFEFQIRACDL

Query:  EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK
          T+    S +   ++    +     G + Y+PLL LRQSW K
Subjt:  EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]1.6e-0627.81Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRR-------------FWLSKNQLLHHLESNKEYNCRIL-----YGPMKLKFYE----
        V++P+ +GYVDG V+KLFF +E+GV+P IP++A+T R+LNY   +              W+       H++ + E+ C  L     +  M+    E    
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRR-------------FWLSKNQLLHHLESNKEYNCRIL-----YGPMKLKFYE----

Query:  ------ERSMGFLLFEFQIRACDL--EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK
               R   +L F  ++ + ++  +      K+   +  +        P G V+Y PLL LRQ W K
Subjt:  ------ERSMGFLLFEFQIRACDL--EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]1.1e-0729.88Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRRFWLSKNQLL--------HHLESNKEYNCRIL---------------YGPMKLKFY
        V++P+ +GYVDG V+KLFF +E+GV+P IP++AET R+LNY   +     N  L         H++   E+ C  L               +G       
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRRFWLSKNQLL--------HHLESNKEYNCRIL---------------YGPMKLKFY

Query:  EERSMGFLLFEFQIRACDL--EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK
          R   +L F  ++ + ++  +      K++  + R+        P G V+Y PLL LRQ W K
Subjt:  EERSMGFLLFEFQIRACDL--EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK

TYK07552.1 girdin-like [Cucumis melo var. makuwa]9.5e-0730.18Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRR-------------FWLSKNQLLHHLESNKEYNCRIL-----YGPMKLKFYE----
        V++P+ +GYVDG V+KLFF +E+GV+P IP++A+T R+LNY+  +              W+       H++   E+ C  L     +  M+    E    
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRR-------------FWLSKNQLLHHLESNKEYNCRIL-----YGPMKLKFYE----

Query:  ------ERSMGFLLFEFQIRACD-LEGTLDAPKSLNLKMRELPHS-SSSRPLGCVHYAPLLALRQSWFK
               R   +L F  ++ + + +  T   P    +  R   HS     P G V+Y PLL LRQ W K
Subjt:  ------ERSMGFLLFEFQIRACD-LEGTLDAPKSLNLKMRELPHS-SSSRPLGCVHYAPLLALRQSWFK

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like5.8e-1032.62Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRRFWLSKNQLLHHLESNKEYNCRI-LYGPMKLKFYEERSMGFLLFEFQIRACDLEGT
        +++PR+KGYV+ +V+K+F  IE+GV+P IP++ ET R+LN+                       CRI ++ P                 F    C+LE  
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRRFWLSKNQLLHHLESNKEYNCRI-LYGPMKLKFYEERSMGFLLFEFQIRACDLEGT

Query:  LDAPKSLNLKMRELPHSSSSRPL-GCVHYAPLLALRQSWFK
        LDA KS +  + ++ +  + R + G + Y+PLL LRQSW K
Subjt:  LDAPKSLNLKMRELPHSSSSRPL-GCVHYAPLLALRQSWFK

A0A5A7SUT0 Reverse transcriptase1.3e-0629.37Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYF----PRRFWLSKNQLLHHLESNKEYNCRILYGPMKLKFYEERSMGFLLFEFQIRACDL
        V++PR+KGYV+ +V+K+F  IE+GV+P IP++AET R+LN+       +F+     L   + S+  Y                 + G+   +F       
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYF----PRRFWLSKNQLLHHLESNKEYNCRILYGPMKLKFYEERSMGFLLFEFQIRACDL

Query:  EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK
          T+    S +   ++    +     G + Y+PLL LRQSW K
Subjt:  EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK

A0A5A7UL51 Girdin-like7.8e-0727.81Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRR-------------FWLSKNQLLHHLESNKEYNCRIL-----YGPMKLKFYE----
        V++P+ +GYVDG V+KLFF +E+GV+P IP++A+T R+LNY   +              W+       H++ + E+ C  L     +  M+    E    
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRR-------------FWLSKNQLLHHLESNKEYNCRIL-----YGPMKLKFYE----

Query:  ------ERSMGFLLFEFQIRACDL--EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK
               R   +L F  ++ + ++  +      K+   +  +        P G V+Y PLL LRQ W K
Subjt:  ------ERSMGFLLFEFQIRACDL--EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK

A0A5A7UWQ6 Uncharacterized protein5.4e-0829.88Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRRFWLSKNQLL--------HHLESNKEYNCRIL---------------YGPMKLKFY
        V++P+ +GYVDG V+KLFF +E+GV+P IP++AET R+LNY   +     N  L         H++   E+ C  L               +G       
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRRFWLSKNQLL--------HHLESNKEYNCRIL---------------YGPMKLKFY

Query:  EERSMGFLLFEFQIRACDL--EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK
          R   +L F  ++ + ++  +      K++  + R+        P G V+Y PLL LRQ W K
Subjt:  EERSMGFLLFEFQIRACDL--EGTLDAPKSLNLKMRELPHSSSSRPLGCVHYAPLLALRQSWFK

A0A5D3C8D9 Girdin-like4.6e-0730.18Show/hide
Query:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRR-------------FWLSKNQLLHHLESNKEYNCRIL-----YGPMKLKFYE----
        V++P+ +GYVDG V+KLFF +E+GV+P IP++A+T R+LNY+  +              W+       H++   E+ C  L     +  M+    E    
Subjt:  VLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRR-------------FWLSKNQLLHHLESNKEYNCRIL-----YGPMKLKFYE----

Query:  ------ERSMGFLLFEFQIRACD-LEGTLDAPKSLNLKMRELPHS-SSSRPLGCVHYAPLLALRQSWFK
               R   +L F  ++ + + +  T   P    +  R   HS     P G V+Y PLL LRQ W K
Subjt:  ------ERSMGFLLFEFQIRACD-LEGTLDAPKSLNLKMRELPHS-SSSRPLGCVHYAPLLALRQSWFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTGTATCCAAGAGTAAAAGGATATGTGGATGGCGATGTCTTGAAGCTCTTCTTCATCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTGTAGCGGAAACAAT
TCGGGCACTCAATTATTTTCCCAGAAGATTTTGGCTGTCCAAAAATCAACTTCTGCACCACTTGGAATCTAACAAGGAGTACAATTGCAGAATTTTGTACGGCCCCATGA
AACTCAAGTTTTATGAGGAAAGAAGCATGGGTTTCCTTCTTTTCGAATTCCAGATTAGAGCATGTGATTTGGAAGGCACATTGGATGCCCCTAAAAGCCTTAATCTAAAG
ATGCGGGAGCTTCCACACAGTTCCTCTAGTAGGCCCTTGGGATGCGTCCATTATGCTCCGTTGTTGGCCTTGCGACAAAGTTGGTTTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTGTATCCAAGAGTAAAAGGATATGTGGATGGCGATGTCTTGAAGCTCTTCTTCATCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTGTAGCGGAAACAAT
TCGGGCACTCAATTATTTTCCCAGAAGATTTTGGCTGTCCAAAAATCAACTTCTGCACCACTTGGAATCTAACAAGGAGTACAATTGCAGAATTTTGTACGGCCCCATGA
AACTCAAGTTTTATGAGGAAAGAAGCATGGGTTTCCTTCTTTTCGAATTCCAGATTAGAGCATGTGATTTGGAAGGCACATTGGATGCCCCTAAAAGCCTTAATCTAAAG
ATGCGGGAGCTTCCACACAGTTCCTCTAGTAGGCCCTTGGGATGCGTCCATTATGCTCCGTTGTTGGCCTTGCGACAAAGTTGGTTTAAGTAG
Protein sequenceShow/hide protein sequence
MVLYPRVKGYVDGDVLKLFFIIEQGVDPAIPLVAETIRALNYFPRRFWLSKNQLLHHLESNKEYNCRILYGPMKLKFYEERSMGFLLFEFQIRACDLEGTLDAPKSLNLK
MRELPHSSSSRPLGCVHYAPLLALRQSWFK