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Lag0005742 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005742
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposase
Genome locationchr6:27696339..27696726
RNA-Seq ExpressionLag0005742
SyntenyLag0005742
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040896.1 transposase [Cucumis melo var. makuwa]8.9e-1547.78Show/hide
Query:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL
        GK  +F++K++EE   KID+L KD       S+DILTQ L TPEH GRVR +GGLI P ++F++ IPS P+   +  +++  WKKEK+Q+
Subjt:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL

KAA0051220.1 transposase [Cucumis melo var. makuwa]2.2e-1357.35Show/hide
Query:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPS
        GK  +F++K++EE  AKID+L KD       S+DILTQ LGTPEH GRVR +GGL+ PS++FH+ IPS
Subjt:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPS

KAA0053273.1 putative transposase [Cucumis melo var. makuwa]1.8e-1550Show/hide
Query:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL
        GK  +F++K++EE   KID+L KD       S+DILTQ L TPEH GRVR +GGLI  S++FH+ IPS PK   +  +++  WKKEK+Q+
Subjt:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL

TYK11863.1 uncharacterized protein E5676_scaffold177G00110 [Cucumis melo var. makuwa]8.9e-1548.89Show/hide
Query:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL
        GK  +F++K++EE   KID+L KD       S+DILTQ LGT EH GRVR +GGLI  S++FH+ IPS P+      +++  WKKEK+Q+
Subjt:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL

TYK24359.1 uncharacterized protein E5676_scaffold205G001410 [Cucumis melo var. makuwa]1.3e-1352.5Show/hide
Query:  IEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL
        I E+A ++D+L KD       S+DILTQ LGTPEH GRVR +GGLI PS++FH  IPS PK   +  +++  WKKEK+Q+
Subjt:  IEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL

TrEMBL top hitse value%identityAlignment
A0A5A7TFT2 Transposase4.3e-1547.78Show/hide
Query:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL
        GK  +F++K++EE   KID+L KD       S+DILTQ L TPEH GRVR +GGLI P ++F++ IPS P+   +  +++  WKKEK+Q+
Subjt:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL

A0A5A7U7P3 Transposase1.1e-1357.35Show/hide
Query:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPS
        GK  +F++K++EE  AKID+L KD       S+DILTQ LGTPEH GRVR +GGL+ PS++FH+ IPS
Subjt:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPS

A0A5A7UBK9 Putative transposase8.7e-1650Show/hide
Query:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL
        GK  +F++K++EE   KID+L KD       S+DILTQ L TPEH GRVR +GGLI  S++FH+ IPS PK   +  +++  WKKEK+Q+
Subjt:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL

A0A5D3CIW3 Uncharacterized protein4.3e-1548.89Show/hide
Query:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL
        GK  +F++K++EE   KID+L KD       S+DILTQ LGT EH GRVR +GGLI  S++FH+ IPS P+      +++  WKKEK+Q+
Subjt:  GKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL

A0A5D3DM41 Uncharacterized protein6.2e-1452.5Show/hide
Query:  IEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL
        I E+A ++D+L KD       S+DILTQ LGTPEH GRVR +GGLI PS++FH  IPS PK   +  +++  WKKEK+Q+
Subjt:  IEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELE-GWKKEKAQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATCGGTCCATTCTTTGGATCCACGCTCGAAGGAAAAACTAGCAAATTCTTAAGCAAAGATATTGAGGAGGATGCTGCAAAAATTGATGAGCTATCAAAAGATGC
AAAGTGTCAAAATGTTAGTTCAAATGACATTTTGACACAAGTGTTGGGTACTCCTGAACACTCGGGACGTGTAAGAAGCATTGGTGGATTAATTGTACCTTCCTACTTCT
TTCACGAGCCCATTCCATCAATTCCCAAGAATGTTGCAGTAGGGGATGAATTAGAAGGTTGGAAGAAAGAAAAGGCACAACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGATCGGTCCATTCTTTGGATCCACGCTCGAAGGAAAAACTAGCAAATTCTTAAGCAAAGATATTGAGGAGGATGCTGCAAAAATTGATGAGCTATCAAAAGATGC
AAAGTGTCAAAATGTTAGTTCAAATGACATTTTGACACAAGTGTTGGGTACTCCTGAACACTCGGGACGTGTAAGAAGCATTGGTGGATTAATTGTACCTTCCTACTTCT
TTCACGAGCCCATTCCATCAATTCCCAAGAATGTTGCAGTAGGGGATGAATTAGAAGGTTGGAAGAAAGAAAAGGCACAACTCTAG
Protein sequenceShow/hide protein sequence
MLIGPFFGSTLEGKTSKFLSKDIEEDAAKIDELSKDAKCQNVSSNDILTQVLGTPEHSGRVRSIGGLIVPSYFFHEPIPSIPKNVAVGDELEGWKKEKAQL