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Lag0005753 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005753
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationchr6:28303324..28304470
RNA-Seq ExpressionLag0005753
SyntenyLag0005753
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0000421 - autophagosome membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464485.1 PREDICTED: autophagy-related protein 16 [Cucumis melo]1.1e-1877.94Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        RDE S+LKA LE+KIKALELA+CENQE+KT+LE MTVKAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
XP_011653271.1 autophagy-related protein 16 [Cucumis sativus]1.8e-1876.47Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        RDE S+LKA LE+K+KALELA+CENQE+KT+LE MTVKAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
XP_022135166.1 autophagy-related protein 16 [Momordica charantia]4.1e-1877.94Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        RDE S+LKA LE+KIKALELAICENQE+K +LE MTVKAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
XP_038879335.1 autophagy-related protein 16 [Benincasa hispida]1.7e-1675Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        R+E  +LKA LE+KIKALELAI ENQE+KT+LE MTVKAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
XP_040986635.1 autophagy-related protein 16 isoform X1 [Juglans microcarpa x Juglans regia]3.8e-1673.53Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        RDE S+LKA LE KIKALEL ICEN +LK +LE MT+KAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
TrEMBL top hitse value%identityAlignment
A0A0A0LP08 WD_REPEATS_REGION domain-containing protein8.8e-1976.47Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        RDE S+LKA LE+K+KALELA+CENQE+KT+LE MTVKAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
A0A1S3CM27 autophagy-related protein 165.2e-1977.94Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        RDE S+LKA LE+KIKALELA+CENQE+KT+LE MTVKAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
A0A5D3BHA5 Autophagy-related protein 165.2e-1977.94Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        RDE S+LKA LE+KIKALELA+CENQE+KT+LE MTVKAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
A0A6J1BZV5 autophagy-related protein 162.0e-1877.94Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        RDE S+LKA LE+KIKALELAICENQE+K +LE MTVKAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
A0A6P9E7C0 autophagy-related protein 16 isoform X15.4e-1672.06Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
        RDE S+LKA LE KIKALEL ICEN +LK +LE +T+KAK+AEAENKMLVD W  QKMQDAE LNE +
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVH
SwissProt top hitse value%identityAlignment
Q6NNP0 Autophagy-related protein 161.7e-1149.28Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVHD
        R++ ++L+  LE K K +++ I EN E++++LE MT + + AE ENKML+D W  QKMQDAE LNE +D
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVHD
Arabidopsis top hitse value%identityAlignment
AT5G50230.1 Transducin/WD40 repeat-like superfamily protein1.2e-1249.28Show/hide
Query:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVHD
        R++ ++L+  LE K K +++ I EN E++++LE MT + + AE ENKML+D W  QKMQDAE LNE +D
Subjt:  RDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVHD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGGCGTGAAGAAACGTCAAAGACTCGCTTCAGTGTTCATCGTTCTGGGTTTTTTTTAACCTTAAATTCCAGCAGAGGAATGTTGGGAACTTGTTACAGGGACGA
ATACTCCAAGCTAAAGGCATACTTAGAGGTGAAAATTAAAGCTCTCGAATTGGCTATATGTGAGAACCAAGAACTTAAAACACGACTTGAAGTAATGACAGTTAAAGCTA
AGGATGCAGAGGCTGAAAATAAGATGTTGGTTGACTGGTGGAAGTTTCAAAAGATGCAGGATGCAGAACCTCTCAATGAGGTTCATGATACTTCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGGCGTGAAGAAACGTCAAAGACTCGCTTCAGTGTTCATCGTTCTGGGTTTTTTTTAACCTTAAATTCCAGCAGAGGAATGTTGGGAACTTGTTACAGGGACGA
ATACTCCAAGCTAAAGGCATACTTAGAGGTGAAAATTAAAGCTCTCGAATTGGCTATATGTGAGAACCAAGAACTTAAAACACGACTTGAAGTAATGACAGTTAAAGCTA
AGGATGCAGAGGCTGAAAATAAGATGTTGGTTGACTGGTGGAAGTTTCAAAAGATGCAGGATGCAGAACCTCTCAATGAGGTTCATGATACTTCAAATTGA
Protein sequenceShow/hide protein sequence
MRRREETSKTRFSVHRSGFFLTLNSSRGMLGTCYRDEYSKLKAYLEVKIKALELAICENQELKTRLEVMTVKAKDAEAENKMLVDWWKFQKMQDAEPLNEVHDTSN