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Lag0005765 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005765
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr6:28954530..28958162
RNA-Seq ExpressionLag0005765
SyntenyLag0005765
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015380966.1 uncharacterized protein LOC107174510 [Citrus sinensis]4.3e-1334Show/hide
Query:  QKTRQFGGSVAEDPHSHLKSFLDICNKF-------------IIPRLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKR
        Q   QF G   EDPH H+K FL++ N+              +  R +     LN +++++VD+ ANGALL K+Y EA+ +L+ IA NNY+W +A   R+ 
Subjt:  QKTRQFGGSVAEDPHSHLKSFLDICNKF-------------IIPRLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKR

Query:  PVKTSLGGFEKDSLTRVNAKIDALTTKMDALTA--NTTHLIVQLNVVGCG
          + S+G    D++T ++A++ +LT  + A+T+   T   + +L+ V CG
Subjt:  PVKTSLGGFEKDSLTRVNAKIDALTTKMDALTA--NTTHLIVQLNVVGCG

XP_022855695.1 uncharacterized protein LOC111376916 [Olea europaea var. sylvestris]1.1e-1643.59Show/hide
Query:  QFGGSVAEDPHSHLKSFLDICNKFIIPRLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDSLTRV
        QFGG+  EDP++HL SFL+IC+      ++TFY GLN  ++I+VDS+A GALL KT +EA+A+LD IA N+Y+W +     K+      G +E D +T +
Subjt:  QFGGSVAEDPHSHLKSFLDICNKFIIPRLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDSLTRV

Query:  NAKIDALTTKMDALTAN
         A++ +LT ++  LT++
Subjt:  NAKIDALTTKMDALTAN

XP_022875736.1 uncharacterized protein LOC111394206 [Olea europaea var. sylvestris]7.4e-1335.42Show/hide
Query:  QFGGSVAEDPHSHLKSFLDICNKFIIP----------------------------RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNY
        QFGG+  E+P+SHL SFL+IC+   +                             +++TFY GLN  + I+VDS+A  ALL K  DEA+A+LD IA NNY
Subjt:  QFGGSVAEDPHSHLKSFLDICNKFIIP----------------------------RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNY

Query:  EWGTAEDKRKRPVKTSLGGFEKDSLTRVNAKIDALTTKMDALTA
        +W +     K+      G +E D +T V  ++ + T ++ ALT+
Subjt:  EWGTAEDKRKRPVKTSLGGFEKDSLTRVNAKIDALTTKMDALTA

XP_024950038.1 uncharacterized protein LOC112496798 [Citrus sinensis]2.5e-1338.64Show/hide
Query:  DPHSHLKSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDSLTRVNAKID
        D     K  L  C    IP   +LETFY GLN +++++VD+SANGALL K+Y+EA+ +L+ IA NNY+W +    R+   + + G    D+LT ++A++ 
Subjt:  DPHSHLKSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDSLTRVNAKID

Query:  ALTTKMDALTANTTHLIVQLNVVGCGIYGEGH
        +LT  + A+T      I Q++ + C   GEGH
Subjt:  ALTTKMDALTANTTHLIVQLNVVGCGIYGEGH

XP_030505151.1 uncharacterized protein LOC115720131 [Cannabis sativa]1.5e-1331.68Show/hide
Query:  FGGSVAEDPHSHLKSFLDICNKFIIPR--------------------LETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKR
        F G  +EDPH HL SFL++ + F + R                    +ETFY GLN  SQ+++D+S NGA+  K+Y++A  +L+ IA NNY+W       
Subjt:  FGGSVAEDPHSHLKSFLDICNKFIIPR--------------------LETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKR

Query:  KRPVKTSLGGFEKDSLTRVNAKIDALTTKMDALTANTTH-----LIVQLNVVGCGIYGEGH
         R V    G  E D++T + A++ ++T  +  ++    +      ++Q   V C   G+GH
Subjt:  KRPVKTSLGGFEKDSLTRVNAKIDALTTKMDALTANTTH-----LIVQLNVVGCGIYGEGH

TrEMBL top hitse value%identityAlignment
A0A1U8PGE2 uncharacterized protein LOC1079419987.4e-1133.33Show/hide
Query:  KSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDSLTRVNAKIDALTTKM
        K  L  C    IP   ++ETFY+GLN +++++VD+SANGAL  K+Y  A+ +++ IA NNY+W T     KR    ++G  + D+L  + A++ ++++ +
Subjt:  KSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDSLTRVNAKIDALTTKM

Query:  DALTAN------TTHLIVQLNVVGCGIYGEGH
          +T N      T   + Q   + C   G+GH
Subjt:  DALTAN------TTHLIVQLNVVGCGIYGEGH

A0A6J1EEI2 uncharacterized protein LOC1114333941.3e-1033.11Show/hide
Query:  RQFGGSVAEDPHSHLKSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDS
        +QF      +     K  L  C    +P   ++ETFY GLN  ++ +VD+SANGA+L KTY+EA+ +L+ IA NN +W    D R  P + + G  E D+
Subjt:  RQFGGSVAEDPHSHLKSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDS

Query:  LTRVNAKIDALTTKMDALT----------ANTTHLIVQLNVVGCGIYGEGH
        L+ +NA++ ++T  +  L            +T  +I Q     C   GE H
Subjt:  LTRVNAKIDALTTKMDALT----------ANTTHLIVQLNVVGCGIYGEGH

A0A6J1H7E4 uncharacterized protein LOC1114611682.0e-1133.77Show/hide
Query:  RQFGGSVAEDPHSHLKSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDS
        +QF      +     K  L  C    +P   ++ETFY GLN  ++ +VD+SANGA+L KTY+EA+ +L+ IA NN +W    D R  P K + G  E D+
Subjt:  RQFGGSVAEDPHSHLKSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDS

Query:  LTRVNAKIDALTTKMDALT----------ANTTHLIVQLNVVGCGIYGEGH
        L+ +NA++ ++T  +  L           A+T  ++ Q     C   GE H
Subjt:  LTRVNAKIDALTTKMDALT----------ANTTHLIVQLNVVGCGIYGEGH

U5CUI2 Retrotrans_gag domain-containing protein1.1e-1134.25Show/hide
Query:  RQFGGSVAEDPHSHLKSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDS
        +Q       D     K  L  C    IP   ++ETFY GLN  S++++D+SANGA+L K+Y+EA  +L+ IA NNY+W        R V    G  E D+
Subjt:  RQFGGSVAEDPHSHLKSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDS

Query:  LTRVNAKIDALTTKMDALTANTTHLI-----VQLNVVGCGIYGEGH
        +T + A++ ++T  +  L+      I     +Q + V C   GEGH
Subjt:  LTRVNAKIDALTTKMDALTANTTHLI-----VQLNVVGCGIYGEGH

W9RRR5 Retrotrans_gag domain-containing protein6.7e-1234.92Show/hide
Query:  KSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDSLTRVNAKIDALTTKM
        K  L  C    IP   ++ETFY GLN+ ++++VD++ANGALL K+Y+E + +L+ +A N+Y+W       + P + + G  E D++T ++A++  LT   
Subjt:  KSFLDICNKFIIP---RLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDSLTRVNAKIDALTTKM

Query:  DALTANTTHLIVQLNVVGCGIYGEGH
          +  +T    VQ   + C   GEGH
Subjt:  DALTANTTHLIVQLNVVGCGIYGEGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTTGGGATATTGAATGCGTTTCTCTTGCATAGACTGATTCATGGGCACGGGTCCCAAGAGCAGTTCTCTAACTTTGTTGCTCTGCATGATAGGTTAGCACTGCA
GCCTAAGCCTTCCAAGGAAGAGGAGGAGAAGAACATGTTTGACCTATTCAAGAAGGTGGAGGTGAATATCCCGCCTTTGGACGTTGTGAAGCAAATTCTTAAGGTAGGAA
AATTTTTAAGAAAATGGGGTTCCAGGAAAGGTACGCAAGAGTGTATGCGTGCTGCTCACCGCATCGACATTGAGATAGACCCGAGATTGACAGAACATACCACCAAAGAA
AAGAAACCGGCGTGCCAGAAGACAAGACAGTTTGGAGGAAGTGTAGCAGAAGATCCACACTCGCATCTCAAATCATTCCTGGACATATGTAACAAATTCATTATCCCTAG
GTTAGAAACATTCTACGTTGGACTGAATAAAAATTCCCAAATTTTAGTAGATTCATCTGCTAACGGTGCGTTGTTAAGGAAAACATATGATGAAGCGCATGCAATGCTTG
ACCTCATCGCACGAAACAACTATGAGTGGGGTACCGCGGAGGATAAAAGGAAGCGCCCAGTAAAGACCAGTTTAGGAGGTTTTGAAAAAGACTCGTTGACCAGAGTGAAT
GCAAAAATTGATGCGTTAACTACGAAGATGGATGCGTTGACAGCAAACACAACTCATCTCATAGTGCAACTCAATGTAGTAGGATGCGGAATCTACGGAGAAGGACATGC
GCATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCTTGGGATATTGAATGCGTTTCTCTTGCATAGACTGATTCATGGGCACGGGTCCCAAGAGCAGTTCTCTAACTTTGTTGCTCTGCATGATAGGTTAGCACTGCA
GCCTAAGCCTTCCAAGGAAGAGGAGGAGAAGAACATGTTTGACCTATTCAAGAAGGTGGAGGTGAATATCCCGCCTTTGGACGTTGTGAAGCAAATTCTTAAGGTAGGAA
AATTTTTAAGAAAATGGGGTTCCAGGAAAGGTACGCAAGAGTGTATGCGTGCTGCTCACCGCATCGACATTGAGATAGACCCGAGATTGACAGAACATACCACCAAAGAA
AAGAAACCGGCGTGCCAGAAGACAAGACAGTTTGGAGGAAGTGTAGCAGAAGATCCACACTCGCATCTCAAATCATTCCTGGACATATGTAACAAATTCATTATCCCTAG
GTTAGAAACATTCTACGTTGGACTGAATAAAAATTCCCAAATTTTAGTAGATTCATCTGCTAACGGTGCGTTGTTAAGGAAAACATATGATGAAGCGCATGCAATGCTTG
ACCTCATCGCACGAAACAACTATGAGTGGGGTACCGCGGAGGATAAAAGGAAGCGCCCAGTAAAGACCAGTTTAGGAGGTTTTGAAAAAGACTCGTTGACCAGAGTGAAT
GCAAAAATTGATGCGTTAACTACGAAGATGGATGCGTTGACAGCAAACACAACTCATCTCATAGTGCAACTCAATGTAGTAGGATGCGGAATCTACGGAGAAGGACATGC
GCATTATTAG
Protein sequenceShow/hide protein sequence
MILGILNAFLLHRLIHGHGSQEQFSNFVALHDRLALQPKPSKEEEEKNMFDLFKKVEVNIPPLDVVKQILKVGKFLRKWGSRKGTQECMRAAHRIDIEIDPRLTEHTTKE
KKPACQKTRQFGGSVAEDPHSHLKSFLDICNKFIIPRLETFYVGLNKNSQILVDSSANGALLRKTYDEAHAMLDLIARNNYEWGTAEDKRKRPVKTSLGGFEKDSLTRVN
AKIDALTTKMDALTANTTHLIVQLNVVGCGIYGEGHAHY