CuGenDBv2

Gene ID	Lag0005770
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	60S ribosomal protein L34
Genome location	chr6:29249528..29249890
RNA-Seq Expression	Lag0005770
Synteny	Lag0005770
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0042254 - ribosome biogenesis (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR008195 - Ribosomal protein L34Ae

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004138165.3 60S ribosomal protein L34 [Cucumis sativus]

1.1e-48

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLA+KS
Subjt:  KIVNKVLKIQKAKEKLAAKS

XP_022939767.1 60S ribosomal protein L34 [Cucurbita moschata]

1.5e-48

89.17

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKL+YQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+I+RAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLAAKS
Subjt:  KIVNKVLKIQKAKEKLAAKS

XP_027098139.1 60S ribosomal protein L34 [Coffea arabica]

5.0e-49

90.83

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLAAKS
Subjt:  KIVNKVLKIQKAKEKLAAKS

XP_038889603.1 60S ribosomal protein L34 [Benincasa hispida]

6.6e-49

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKL+YQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLAAKS
Subjt:  KIVNKVLKIQKAKEKLAAKS

XP_038893923.1 60S ribosomal protein L34-like [Benincasa hispida]

8.6e-49

90.83

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLAAKS
Subjt:  KIVNKVLKIQKAKEKLAAKS

TrEMBL top hits

e value

%identity

Alignment

A0A068TVQ9 Uncharacterized protein

7.1e-49

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        M Q LTYRKRHSYA KSNQHRVVKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLAAKS
Subjt:  KIVNKVLKIQKAKEKLAAKS

A0A0A0LK03 Uncharacterized protein

5.4e-49

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLA+KS
Subjt:  KIVNKVLKIQKAKEKLAAKS

A0A1S3BV34 60S ribosomal protein L34

5.4e-49

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLA+KS
Subjt:  KIVNKVLKIQKAKEKLAAKS

A0A5A7UWQ0 60S ribosomal protein L34

5.4e-49

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLA+KS
Subjt:  KIVNKVLKIQKAKEKLAAKS

A0A6P6V549 60S ribosomal protein L34

2.4e-49

90.83

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLAAKS
Subjt:  KIVNKVLKIQKAKEKLAAKS

SwissProt top hits

e value

%identity

Alignment

P40590 60S ribosomal protein L34

5.2e-49

85.83

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYR+RHSYA KSNQHRVVKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRP EYKRSRL+RN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQK KEK AAK+
Subjt:  KIVNKVLKIQKAKEKLAAKS

P41098 60S ribosomal protein L34

1.6e-50

87.5

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ LTYRKRHSYA KSNQHRVVKT GGKL+YQ+TKKRASGPKCPVTGKRIQ IPHLRP EYKRSRL+RN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLKIQKAKEKLAAKS
Subjt:  KIVNKVLKIQKAKEKLAAKS

Q42351 60S ribosomal protein L34-1

2.0e-48

83.33

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ L YR RHSYA KSNQHR+VKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRP+EYKRSRL+RN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLK+QKAKEK+A K+
Subjt:  KIVNKVLKIQKAKEKLAAKS

Q9FE65 60S ribosomal protein L34-2

9.9e-48

83.19

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ L YR RHSYA KSNQHR+VKT GGKL YQTTKKRASGPKCPVTGKRIQ IPHLRP EYKRSRL+RN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAK
        KIV KVLK+QKAKEK+A K
Subjt:  KIVNKVLKIQKAKEKLAAK

Q9LJW6 60S ribosomal protein L34-3

5.8e-48

83.33

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ L YR RHSYA KSNQHR+VKT GGKL YQTT KRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+I+RAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLK+QKAKEK A KS
Subjt:  KIVNKVLKIQKAKEKLAAKS

Arabidopsis top hits

e value

%identity

Alignment

AT1G26880.1 Ribosomal protein L34e superfamily protein

1.4e-49

83.33

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ L YR RHSYA KSNQHR+VKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRP+EYKRSRL+RN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLK+QKAKEK+A K+
Subjt:  KIVNKVLKIQKAKEKLAAKS

AT1G26880.2 Ribosomal protein L34e superfamily protein

2.8e-37

81.52

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKII
        MVQ L YR RHSYA KSNQHR+VKT GGKLVYQTTKKRASGPKCPVTGKRIQ IPHLRP+EYKRSRL+RN +TVNRAY GVLSG AV E+ +
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKII

AT1G69620.1 ribosomal protein L34

7.0e-49

83.19

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ L YR RHSYA KSNQHR+VKT GGKL YQTTKKRASGPKCPVTGKRIQ IPHLRP EYKRSRL+RN +TVNRAY GVLSG AV E+IIRAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAK
        KIV KVLK+QKAKEK+A K
Subjt:  KIVNKVLKIQKAKEKLAAK

AT3G28900.1 Ribosomal protein L34e superfamily protein

4.1e-49

83.33

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Query:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ
        MVQ L YR RHSYA KSNQHR+VKT GGKL YQTT KRASGPKCPVTGKRIQ IPHLRPAEYKRSRLARN +TVNRAY GVLSG AV E+I+RAFLVEEQ
Subjt:  MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQ

Query:  KIVNKVLKIQKAKEKLAAKS
        KIV KVLK+QKAKEK A KS
Subjt:  KIVNKVLKIQKAKEKLAAKS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTTCAACATCTTACATACCGCAAGCGCCATAGCTATGCTATTAAGTCTAACCAGCATCGTGTCGTCAAAACCCTTGGCGGGAAGCTCGTGTACCAGACTACCAAGAA
GAGAGCCAGTGGACCAAAATGTCCAGTTACCGGCAAAAGGATTCAGAGAATTCCTCACTTGAGGCCAGCTGAATATAAGAGGTCTAGACTGGCTAGGAACTGCAAGACTG
TGAATCGTGCATACGACGGCGTTTTGTCTGGCTGTGCCGTGGGAGAGAAGATCATTCGGGCCTTTTTGGTGGAAGAACAAAAGATTGTGAATAAGGTATTGAAGATTCAG
AAGGCAAAGGAAAAGCTGGCAGCAAAGAGCTAA

mRNA sequence

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Protein sequence

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MVQHLTYRKRHSYAIKSNQHRVVKTLGGKLVYQTTKKRASGPKCPVTGKRIQRIPHLRPAEYKRSRLARNCKTVNRAYDGVLSGCAVGEKIIRAFLVEEQKIVNKVLKIQ
KAKEKLAAKS

Lag0005770 (gene) of Sponge gourd (AG-4) v1 genome