; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005775 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005775
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAT hook motif DNA-binding family protein
Genome locationchr6:29630619..29632640
RNA-Seq ExpressionLag0005775
SyntenyLag0005775
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596739.1 AT-hook motif nuclear-localized protein 13, partial [Cucurbita argyrosperma subsp. sororia]9.3e-0461.36Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY
        +DIASKV+AFSQQ  +T C+L  HG V NVTLHQ  M AG   Y
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY
XP_022944476.1 AT-hook motif nuclear-localized protein 8-like [Cucurbita moschata]9.3e-0461.36Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY
        +DIASKV+AFSQQ  +T C+L  HG V NVTLHQ  M AG   Y
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY
XP_023540487.1 AT-hook motif nuclear-localized protein 8-like [Cucurbita pepo subsp. pepo]9.3e-0461.36Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY
        +DIASKV+AFSQQ  +T C+L  HG V NVTLHQ  M AG   Y
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY
TrEMBL top hitse value%identityAlignment
A0A6J1FUI4 AT-hook motif nuclear-localized protein4.5e-0461.36Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY
        +DIASKV+AFSQQ  +T C+L  HG V NVTLHQ  M AG   Y
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY
SwissProt top hitse value%identityAlignment
Q9FIR1 AT-hook motif nuclear-localized protein 89.7e-0441.43Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVK-CAKETKIEASSYRSG
        +DIASKVMAFS Q  +T CIL   G V  V L Q    +G+  Y G F I  +       ++  S+ RSG
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVK-CAKETKIEASSYRSG
Arabidopsis top hitse value%identityAlignment
AT2G45850.1 AT hook motif DNA-binding family protein5.8e-0438.16Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVKCAKETKIEASSYRSGKDNFSPS
        +DIASKV+AFSQQ  +  C+L   G V   TL Q     G  KY G F I  +  +     +  S+R+   N S S
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVKCAKETKIEASSYRSGKDNFSPS
AT2G45850.2 AT hook motif DNA-binding family protein5.8e-0438.16Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVKCAKETKIEASSYRSGKDNFSPS
        +DIASKV+AFSQQ  +  C+L   G V   TL Q     G  KY G F I  +  +     +  S+R+   N S S
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVKCAKETKIEASSYRSGKDNFSPS
AT4G00200.1 AT hook motif DNA-binding family protein7.6e-0438.57Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVKCA-KETKIEASSYRSG
        +DI  ++++FSQQ  +  CIL  +GV+ NVTL Q     G   Y G F I  +  +  ET+ + S  RSG
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVKCA-KETKIEASSYRSG
AT4G25320.1 AT hook motif DNA-binding family protein5.8e-0442Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSI
        +D+  K+M FSQQ  +  CIL  +G + NVTL Q +   G   Y G F I
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSI
AT5G46640.1 AT hook motif DNA-binding family protein6.9e-0541.43Show/hide
Query:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVK-CAKETKIEASSYRSG
        +DIASKVMAFS Q  +T CIL   G V  V L Q    +G+  Y G F I  +       ++  S+ RSG
Subjt:  QDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKY-GAFSIACVK-CAKETKIEASSYRSG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGTTTGAAGAAGATATTTGGCTTAGGGGTGTACTTTAAGATGCCTTTTATTGATTGGCAAGACATTGCCTCAAAAGTTATGGCATTTTCACAGCAGCGGCTGCA
GACTTTTTGTATTCTCCCTGTCCATGGTGTTGTCTACAATGTTACTCTTCACCAACTTTTAATGCAAGCTGGATTGCCAAAGTATGGAGCTTTCTCAATAGCATGTGTTA
AATGTGCAAAAGAAACTAAAATTGAAGCTTCCTCCTATAGAAGTGGCAAGGATAATTTTTCTCCATCATTCTACTTGAAAGTACCGATTTCGGTACGGAGCTCGGTGGAC
GGATGGAAAAACTTAGTAAGGAATGCTTGCGCCAATTCATCCCAAGTGTTGATGCTTCTTGGTGCCAATGACTCTAGTCAATCCTTAGCCTTATCCTACATAGAGAAAGG
AAACAATCGCAAACGTATAGCATTAGGGGAAACACCGTTCATCTCAACTGTACTACCAATCTCTAAAAATGAACGCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAGTTTGAAGAAGATATTTGGCTTAGGGGTGTACTTTAAGATGCCTTTTATTGATTGGCAAGACATTGCCTCAAAAGTTATGGCATTTTCACAGCAGCGGCTGCA
GACTTTTTGTATTCTCCCTGTCCATGGTGTTGTCTACAATGTTACTCTTCACCAACTTTTAATGCAAGCTGGATTGCCAAAGTATGGAGCTTTCTCAATAGCATGTGTTA
AATGTGCAAAAGAAACTAAAATTGAAGCTTCCTCCTATAGAAGTGGCAAGGATAATTTTTCTCCATCATTCTACTTGAAAGTACCGATTTCGGTACGGAGCTCGGTGGAC
GGATGGAAAAACTTAGTAAGGAATGCTTGCGCCAATTCATCCCAAGTGTTGATGCTTCTTGGTGCCAATGACTCTAGTCAATCCTTAGCCTTATCCTACATAGAGAAAGG
AAACAATCGCAAACGTATAGCATTAGGGGAAACACCGTTCATCTCAACTGTACTACCAATCTCTAAAAATGAACGCAAGTAG
Protein sequenceShow/hide protein sequence
MTSLKKIFGLGVYFKMPFIDWQDIASKVMAFSQQRLQTFCILPVHGVVYNVTLHQLLMQAGLPKYGAFSIACVKCAKETKIEASSYRSGKDNFSPSFYLKVPISVRSSVD
GWKNLVRNACANSSQVLMLLGANDSSQSLALSYIEKGNNRKRIALGETPFISTVLPISKNERK