; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005796 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005796
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr6:30414099..30414581
RNA-Seq ExpressionLag0005796
SyntenyLag0005796
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]1.3e-2342.42Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMV
        +ASL++ ++ LT+  + +    +A         +   E+VQY+ NR +      +PN+YHP LRNH NFSY NTKN+LQPPPGF S  + EKK +LE+ +
Subjt:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMV

Query:  TMFIKEQKVLNV-------NLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ
          F++E K           N++T  +N   T+KN+EVQIGQ+A  +NA Q+G FPS+TE NP  Q
Subjt:  TMFIKEQKVLNV-------NLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]1.7e-2342.42Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMV
        +ASL++ ++ L++  + +S   +A         +   E+VQY+ NR +      +PN+YHP LRNH NFSY NTKN+LQPPPGF S  + EKK +LE+ +
Subjt:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMV

Query:  TMFIKEQKVLNV-------NLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ
          F++E K           N++T  +N   T+KN+EVQIGQ+A  +NA Q+G FPS+TE NP  Q
Subjt:  TMFIKEQKVLNV-------NLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ

XP_023929660.1 uncharacterized protein LOC112040975 [Quercus suber]2.2e-2342.42Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMV
        +ASL++ ++ LT+  + +S+  +A         +   E VQY+ NR +      +PN+YHP LRNH NFSY NTKN+LQPPPGF S  + EKK +LE+ +
Subjt:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMV

Query:  TMFIKEQKV-------LNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ
          F++E K           N++T  +N    +KN+EVQIGQ+A  +NA Q+G FPS+TE NP  Q
Subjt:  TMFIKEQKV-------LNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ

XP_024017305.1 uncharacterized protein LOC112090376 [Morus notabilis]8.3e-2345.12Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQD---VEEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEM
        +++L+N +  LT+ E   S   +A G S   + D    E+VQ+V NR F      +PN YHP LRNH NFSY+N +NILQPPPGF +   +EKK ++E++
Subjt:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQD---VEEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEM

Query:  VTMFI--------KEQKVLNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNP
        ++ FI        K++  L+ N++T  NN + T+K++EVQIGQ+A AV     GKFPSDTEPNP
Subjt:  VTMFI--------KEQKVLNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNP

XP_024020480.1 uncharacterized protein LOC112091333 [Morus notabilis]8.3e-2344.51Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQD---VEEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEM
        +++L+N +  LT+ E   S   +A G S   +QD    E+VQ+V NR F      +PN YHP LRNH NFSY+N +N+LQPPPGF +   +EKK ++E++
Subjt:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQD---VEEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEM

Query:  VTMFI--------KEQKVLNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNP
        ++ FI        K++  L+ N++T  NN + T+K++EVQIGQ+A  V     GKFPSDTEPNP
Subjt:  VTMFI--------KEQKVLNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNP

TrEMBL top hitse value%identityAlignment
A0A2I4FP56 uncharacterized protein LOC1090008379.5e-1737.35Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQP-PPGFASSSTLEKKSNLEEM
        +A+L++ ++ L +  + +S   +A       S +   E+VQY+ N+ +      +PN +HP LRNH N SY NTKN+LQP PP   +S + +KK +LE  
Subjt:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQP-PPGFASSSTLEKKSNLEEM

Query:  VTMFI-------KEQKVLNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ
        +  F+       KE      N++T  +N    +KN+EVQIGQ+A  +NA Q+  FPS+TE NP  Q
Subjt:  VTMFI-------KEQKVLNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ

A0A2I4G4Q3 uncharacterized protein LOC1090047123.5e-1940.59Show/hide
Query:  MASLTNALNKLTSSEVVKS----ISTLAEGYSKKESQDVEEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNIL--QPPPGFASSSTLEKKSNL
        +A+L++ ++ LT+  + +S    ++T     S + SQ  E+VQY+ NR +      +PN+YHP  +NH N SY NTKN+L  QPPPGF S S+ EKK +L
Subjt:  MASLTNALNKLTSSEVVKS----ISTLAEGYSKKESQDVEEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNIL--QPPPGFASSSTLEKKSNL

Query:  EEMVTMFIKEQKVLNVNLQTVVNNHDT--------TLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ
        E+ +  FI+E         + ++N +T          KN+EVQIGQ+A  +NA Q+G FPS+TE NP  Q
Subjt:  EEMVTMFIKEQKVLNVNLQTVVNNHDT--------TLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ

A0A2P5BPI6 Uncharacterized protein6.0e-1950.46Show/hide
Query:  VPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMVTMFI--------KEQKVLNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGK
        +P  Y+P LRNH NFSY NT+N+LQPPPGF +    EKKS+LE++++ FI        K++  L+ N++T  NN + T+K++EVQIGQ+A ++   Q GK
Subjt:  VPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMVTMFI--------KEQKVLNVNLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGK

Query:  FPSDTEPNP
        FPSDTE NP
Subjt:  FPSDTEPNP

A0A6P9DWY0 uncharacterized protein LOC1183440261.9e-2040.61Show/hide
Query:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMV
        +ASL++ ++ LT+  + +S   +A       S +   E+VQY+ NR +      +PN+YH  LRNH N SY NTKN+LQP PGF S  + EKK +LE+ +
Subjt:  MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMV

Query:  TMFIKEQKVLNV-------NLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ
          F++E             N++T  +N    +KN+EVQIGQ+A  +NA Q+G FPS+TE NP  Q
Subjt:  TMFIKEQKVLNV-------NLQTVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ

A0A6P9F5T6 uncharacterized protein LOC1089899762.7e-1945.65Show/hide
Query:  SKKESQDVEEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNIL--QPPPGFASSSTLEKKSNLEEMVTMFIKEQKVLNV-------NLQTVVNN
        S +ESQ  E+VQY+ N  +      +PN+Y+P L+NH N SY NTKN+L  QPPPGF S S+ EKK +LE+ +  F++E  V          N++T  +N
Subjt:  SKKESQDVEEVQYVGNRPFT---QGVPNFYHPSLRNHGNFSYSNTKNIL--QPPPGFASSSTLEKKSNLEEMVTMFIKEQKVLNV-------NLQTVVNN

Query:  HDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ
           T+KN+EVQIGQ+A  +N+ Q+G FPS+ E NP  Q
Subjt:  HDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTTTGACAAACGCTCTCAACAAGCTAACTTCATCTGAGGTAGTCAAATCCATTTCCACCTTAGCTGAAGGATATTCAAAGAAAGAGAGTCAAGATGTGGAAGA
AGTTCAGTATGTGGGAAACAGACCATTCACTCAAGGAGTACCGAACTTCTACCACCCTAGTCTACGCAATCATGGGAACTTCTCGTACTCGAACACGAAGAACATATTGC
AGCCACCGCCAGGTTTTGCATCATCCAGTACGCTAGAAAAGAAGAGTAACCTGGAGGAGATGGTGACCATGTTTATCAAAGAACAGAAGGTGTTAAATGTGAATCTCCAG
ACAGTAGTTAATAACCACGACACAACTCTGAAAAATATGGAAGTTCAGATAGGTCAGATTGCTTTAGCGGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGCGACACTGA
ACCCAACCCAACAGTGCAAGATGGTGACACTAAGAAGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTTTGACAAACGCTCTCAACAAGCTAACTTCATCTGAGGTAGTCAAATCCATTTCCACCTTAGCTGAAGGATATTCAAAGAAAGAGAGTCAAGATGTGGAAGA
AGTTCAGTATGTGGGAAACAGACCATTCACTCAAGGAGTACCGAACTTCTACCACCCTAGTCTACGCAATCATGGGAACTTCTCGTACTCGAACACGAAGAACATATTGC
AGCCACCGCCAGGTTTTGCATCATCCAGTACGCTAGAAAAGAAGAGTAACCTGGAGGAGATGGTGACCATGTTTATCAAAGAACAGAAGGTGTTAAATGTGAATCTCCAG
ACAGTAGTTAATAACCACGACACAACTCTGAAAAATATGGAAGTTCAGATAGGTCAGATTGCTTTAGCGGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGCGACACTGA
ACCCAACCCAACAGTGCAAGATGGTGACACTAAGAAGTGGTAG
Protein sequenceShow/hide protein sequence
MASLTNALNKLTSSEVVKSISTLAEGYSKKESQDVEEVQYVGNRPFTQGVPNFYHPSLRNHGNFSYSNTKNILQPPPGFASSSTLEKKSNLEEMVTMFIKEQKVLNVNLQ
TVVNNHDTTLKNMEVQIGQIALAVNALQKGKFPSDTEPNPTVQDGDTKKW