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Lag0005799 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005799
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr6:30488352..30488717
RNA-Seq ExpressionLag0005799
SyntenyLag0005799
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0763018.1 hypothetical protein [Gossypium trilobum]2.2e-0430.63Show/hide
Query:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS
        M EA A  + +  T+ +    ++VE D+L V K V+ V+   +   N+++++K      +       S ++N+VA+ALA   RR  +   W+EEAL    
Subjt:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS

Query:  QLVCLDRREGS
         L   DR  GS
Subjt:  QLVCLDRREGS

MBA0795891.1 hypothetical protein [Gossypium harknessii]2.2e-0431.78Show/hide
Query:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS
        M EA A  + + LT+ +    ++VE D+L V K V+ V+   +   N++++IK      +       S ++N+VA+ALA   RR  +   W+EEAL    
Subjt:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS

Query:  QLVCLDR
         L   DR
Subjt:  QLVCLDR

XP_026443317.1 uncharacterized protein LOC113343293 [Papaver somniferum]1.3e-0433.66Show/hide
Query:  ALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQG-VDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWASQL
        ALA    I   K+  +  + +E D L V  ++ G + + D    N+I D KS  +S      +   RESN++AN+LA  AR  RVD +W  E   W   L
Subjt:  ALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQG-VDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWASQL

Query:  V
        +
Subjt:  V

XP_042958143.1 uncharacterized protein LOC122293710 [Carya illinoinensis]4.5e-0529.81Show/hide
Query:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS
        +AE +A+W+ +EL+  +  + + +E D+ +V   V  VD   +   +I+ED+K+         +  T RE N+VA+ LA  A     D +W++E   + S
Subjt:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS

Query:  QLVC
          VC
Subjt:  QLVC

XP_042972980.1 uncharacterized protein LOC122304781 [Carya illinoinensis]5.9e-0529.81Show/hide
Query:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS
        +AE +A+W+ +EL+  +  + + +E D+ +V   V  VD   +   +I+ED+K+         +  T RE N+VA+ LA  A     D +W++E   + S
Subjt:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS

Query:  QLVC
          VC
Subjt:  QLVC

TrEMBL top hitse value%identityAlignment
A0A7J8LMZ2 RNase H domain-containing protein (Fragment)4.1e-0429.91Show/hide
Query:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS
        M E  A  + +  T+ +    ++VE D+L+V K V+ V+   +   N++++IK      +       S ++N+VA+ALA   RR  +   W+EEAL    
Subjt:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS

Query:  QLVCLDR
         L   DR
Subjt:  QLVCLDR

A0A7J8RBA4 RNase H domain-containing protein1.4e-0430.84Show/hide
Query:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS
        M EA A  + +  T+ +    ++VE D+L V K V+ V+   +   N++++IK      +       S ++N+VA+ALA   RR  +   W+EEAL    
Subjt:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS

Query:  QLVCLDR
         L   DR
Subjt:  QLVCLDR

A0A7J8WDX8 RNase H domain-containing protein1.4e-0430.84Show/hide
Query:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS
        M EA A  + +  T+ +    ++VE D+L V K V+ V+   +   N++++IK      +       S ++N+VA+ALA   RR  +   W+EEAL    
Subjt:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS

Query:  QLVCLDR
         L   DR
Subjt:  QLVCLDR

A0A7J9DQU9 RNase H domain-containing protein1.1e-0430.63Show/hide
Query:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS
        M EA A  + +  T+ +    ++VE D+L V K V+ V+   +   N+++++K      +       S ++N+VA+ALA   RR  +   W+EEAL    
Subjt:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS

Query:  QLVCLDRREGS
         L   DR  GS
Subjt:  QLVCLDRREGS

A0A7J9GEI4 RNase H domain-containing protein1.1e-0431.78Show/hide
Query:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS
        M EA A  + + LT+ +    ++VE D+L V K V+ V+   +   N++++IK      +       S ++N+VA+ALA   RR  +   W+EEAL    
Subjt:  MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWAS

Query:  QLVCLDR
         L   DR
Subjt:  QLVCLDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAGCTTTAGCCATTTGGGAGGGGATCGAACTCACAAAATCAATCGATATTCATCCAATTTGGGTGGAAACTGATTCACTTCTAGTGTGGAAGCTCGTTCAGGG
AGTCGATACCTATGATAACGAAACTCAAAATATCATAGAAGATATCAAATCCTATGGAGATTCAGGGGAGATGGAAGGGTTGTTACTAACCTCTAGAGAATCAAATCAAG
TCGCAAACGCCTTAGCTGTCCATGCTCGAAGATGTCGCGTCGATGGAGTCTGGATGGAAGAAGCTCTTCCATGGGCGAGTCAGTTGGTTTGCTTAGACAGAAGAGAAGGT
AGCCGGAGATTGGATTTTGACAGAAGCAGACGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAGCTTTAGCCATTTGGGAGGGGATCGAACTCACAAAATCAATCGATATTCATCCAATTTGGGTGGAAACTGATTCACTTCTAGTGTGGAAGCTCGTTCAGGG
AGTCGATACCTATGATAACGAAACTCAAAATATCATAGAAGATATCAAATCCTATGGAGATTCAGGGGAGATGGAAGGGTTGTTACTAACCTCTAGAGAATCAAATCAAG
TCGCAAACGCCTTAGCTGTCCATGCTCGAAGATGTCGCGTCGATGGAGTCTGGATGGAAGAAGCTCTTCCATGGGCGAGTCAGTTGGTTTGCTTAGACAGAAGAGAAGGT
AGCCGGAGATTGGATTTTGACAGAAGCAGACGGTAG
Protein sequenceShow/hide protein sequence
MAEALAIWEGIELTKSIDIHPIWVETDSLLVWKLVQGVDTYDNETQNIIEDIKSYGDSGEMEGLLLTSRESNQVANALAVHARRCRVDGVWMEEALPWASQLVCLDRREG
SRRLDFDRSRR