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Lag0005825 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005825
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag-pro-like protein
Genome locationchr6:31324779..31325096
RNA-Seq ExpressionLag0005825
SyntenyLag0005825
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]1.4e-1862.35Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQTPNNMLLRIHS
        MEE+ KDM+KM+Q+INNL EQV+KILELLS GKGK  V+ TQ SNPIQ+ DDP+YPPGFTP H+    + P+ +  N M LRI S
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQTPNNMLLRIHS

XP_031737553.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402446 [Cucumis sativus]3.1e-1875Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHV
        MEEQ KDM+KM+QDINNL EQV+KILELLS GKGK VVE  Q SNP+Q+ DDP+YPPGFTP+H+
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHV

XP_031738857.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus]3.1e-1875Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHV
        MEEQ KDM+KM+QDINNL EQV+KILELLS GKGK VVE  Q SNP+Q+ DDP+YPPGFTP+H+
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHV

XP_031741309.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]3.1e-1875Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHV
        MEEQ KDM+KM+QDINNL EQV+KILELLS GKGK VVE  Q SNP+Q+ DDP+YPPGFTP+H+
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHV

XP_031742360.1 uncharacterized protein LOC116404324 [Cucumis sativus]3.1e-1875Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHV
        MEEQ KDM+KM+QDINNL EQV+KILELLS GKGK VVE  Q SNP+Q+ DDP+YPPGFTP+H+
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHV

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein7.4e-1866.67Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQT
        MEE+ KDM+KM+Q+INNL EQV+KILELLS GKGK VV+  Q SNPIQ+ DDP+YPPGFTP H+    + PQ QT
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQT

A0A5A7T1W2 Retrotrans_gag domain-containing protein6.7e-1962.35Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQTPNNMLLRIHS
        MEE+ KDM+KM+Q+INNL EQV+KILELLS GKGK  V+ TQ SNPIQ+ DDP+YPPGFTP H+    + P+ +  N M LRI S
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQTPNNMLLRIHS

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein7.4e-1866.67Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQT
        MEE+ KDM+KM+Q+INNL EQV+KILELLS GKGK VV+  Q SNPIQ+ DDP+YPPGFTP H+    + PQ QT
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQT

A0A5A7TGG5 Putative RNA-directed DNA polymerase4.3e-1868Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQT
        M+EQ KDM+KM+Q+INNL EQV+KILELLS GKGK VV+ TQ SNPIQ+ DDP+YPPGFTP H    ++ PQ QT
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQT

A0A5D3CY27 Girdin-like3.3e-1862.2Show/hide
Query:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQTPNNMLLR
        MEEQ KDM+KM+Q+INNL EQV KILELLS GKGK +V+  Q SNPIQ+ DDP+YPPGFTP H    ++ PQ QT  + +L+
Subjt:  MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQTPNNMLLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGCAAGGAAAGGATATGGAGAAAATGAAACAAGATATCAATAATCTTAGTGAACAAGTAGCGAAAATTCTAGAGCTACTTTCAACTGGTAAAGGAAAATGGGT
TGTAGAAGCAACACAGGTAAGCAATCCAATCCAGGAAATCGATGATCCTGTTTATCCACCAGGATTTACTCCTCAACATGTACAACAACGCCTGCATTTTCCACAGCCAC
AAACCCCCAACAATATGTTGCTTCGAATCCACTCTACACTCCTATTCCATATATGGAAAAATTGGAAGCTTAAGCTGGAATTCAAATCAATAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGCAAGGAAAGGATATGGAGAAAATGAAACAAGATATCAATAATCTTAGTGAACAAGTAGCGAAAATTCTAGAGCTACTTTCAACTGGTAAAGGAAAATGGGT
TGTAGAAGCAACACAGGTAAGCAATCCAATCCAGGAAATCGATGATCCTGTTTATCCACCAGGATTTACTCCTCAACATGTACAACAACGCCTGCATTTTCCACAGCCAC
AAACCCCCAACAATATGTTGCTTCGAATCCACTCTACACTCCTATTCCATATATGGAAAAATTGGAAGCTTAAGCTGGAATTCAAATCAATAATATGA
Protein sequenceShow/hide protein sequence
MEEQGKDMEKMKQDINNLSEQVAKILELLSTGKGKWVVEATQVSNPIQEIDDPVYPPGFTPQHVQQRLHFPQPQTPNNMLLRIHSTLLFHIWKNWKLKLEFKSII