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Lag0005827 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005827
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:31415326..31416341
RNA-Seq ExpressionLag0005827
SyntenyLag0005827
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]6.3e-2937.17Show/hide
Query:  ENKKKSNRRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDR-VWGESLRVKVTMDIKKPLRRG
        E + K   RGPW++ K++I+ ++PKG  +I  L+F  A FWV  H +P++C+N++    L   IG  V   EI  E R  WG+ +RVKV +DI KPL+R 
Subjt:  ENKKKSNRRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDR-VWGESLRVKVTMDIKKPLRRG

Query:  TNLKVGSMAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDE--EEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREEEEDKNNE
          +K+G   E T + +  E+LPDFC+ CGR+GH + +C +ED +    + + T++G W+R   + K+K+K      G+ S R    + + E
Subjt:  TNLKVGSMAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDE--EEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREEEEDKNNE

TXG73180.1 hypothetical protein EZV62_001759 [Acer yangbiense]1.7e-2936.31Show/hide
Query:  RGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRGTNLKVGSMA
        RGPW + +++I+ ++P G R++  L F  A FWV  H +P++C+NR+ A  L   IG  V++     E   WG  +RVKV +DI +PL+R   LK+    
Subjt:  RGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRGTNLKVGSMA

Query:  EETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDE--EEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREEEEDK
        E   + +  E+LPDFCY CGR+GHV+ +C +E+ +    +   T+YG WL+   + K KS+ +  + G+ S R++ +++
Subjt:  EETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDE--EEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREEEEDK

TXG73888.1 hypothetical protein EZV62_002467 [Acer yangbiense]7.0e-2837.57Show/hide
Query:  RRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDR-VWGESLRVKVTMDIKKPLRRGTNLKVGS
        RRGPW +DK++I+  + +G  +I  L F  A FWV  H +P++C+N++ A  L   IG  +   EI  E R  WG+ LRVKV +DI +PL+R   LK+  
Subjt:  RRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDR-VWGESLRVKVTMDIKKPLRRGTNLKVGS

Query:  MAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDEEEEDT--QYGPWLR----EHSMFKTKSKGKQPLKGNRSTREEEEDKNNEE
              + +  E+L +FCY CGR+GH +NDC + D + +  + +  ++G WLR    E  M+K+ S+G     G + T EE  + +N+E
Subjt:  MAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDEEEEDT--QYGPWLR----EHSMFKTKSKGKQPLKGNRSTREEEEDKNNEE

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.8e-2841.14Show/hide
Query:  AENKKKSNRRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRG
        + ++ +  R GPW +D+A+I+ D P    +   ++FR  S WVHF  L + C+N+  A  LGN+IG F  +E  +  +  WG  LRV+V  D+ KPL RG
Subjt:  AENKKKSNRRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRG

Query:  TNLKVGSMAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDEEEEDTQYGPWLR
          L +       WIPI  E+LPDF Y CGRL H++ DC  +   D   ++ QYGPWLR
Subjt:  TNLKVGSMAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDEEEEDTQYGPWLR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.4e-3139.7Show/hide
Query:  RRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRGTNLKVGSM
        + GPW +DKA+I+  +P  ++ I  LEF   +FW+H   LP+  LN+  A+ LGN+IG FV + + +E+   WG SLR++V +DI KPLRRG  + +   
Subjt:  RRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRGTNLKVGSM

Query:  AEETWIPITIEKLPDFCYQCGRLGHVMNDCKEE--DNEDEEEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREE---EEDKNNEEQ-VEEISKLLSE
            WIPI  E+LPDFCY CG +GH  +DC       +D+    ++YGPWLR      +K+  ++  KG    RE+       N++E+ VEE  + LSE
Subjt:  AEETWIPITIEKLPDFCYQCGRLGHVMNDCKEE--DNEDEEEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREE---EEDKNNEEQ-VEEISKLLSE

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein3.1e-2937.17Show/hide
Query:  ENKKKSNRRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDR-VWGESLRVKVTMDIKKPLRRG
        E + K   RGPW++ K++I+ ++PKG  +I  L+F  A FWV  H +P++C+N++    L   IG  V   EI  E R  WG+ +RVKV +DI KPL+R 
Subjt:  ENKKKSNRRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDR-VWGESLRVKVTMDIKKPLRRG

Query:  TNLKVGSMAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDE--EEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREEEEDKNNE
          +K+G   E T + +  E+LPDFC+ CGR+GH + +C +ED +    + + T++G W+R   + K+K+K      G+ S R    + + E
Subjt:  TNLKVGSMAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDE--EEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREEEEDKNNE

A0A5C7IV30 CCHC-type domain-containing protein8.1e-3036.31Show/hide
Query:  RGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRGTNLKVGSMA
        RGPW + +++I+ ++P G R++  L F  A FWV  H +P++C+NR+ A  L   IG  V++     E   WG  +RVKV +DI +PL+R   LK+    
Subjt:  RGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRGTNLKVGSMA

Query:  EETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDE--EEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREEEEDK
        E   + +  E+LPDFCY CGR+GHV+ +C +E+ +    +   T+YG WL+   + K KS+ +  + G+ S R++ +++
Subjt:  EETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDE--EEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREEEEDK

A0A5C7IXM0 CCHC-type domain-containing protein3.4e-2837.57Show/hide
Query:  RRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDR-VWGESLRVKVTMDIKKPLRRGTNLKVGS
        RRGPW +DK++I+  + +G  +I  L F  A FWV  H +P++C+N++ A  L   IG  +   EI  E R  WG+ LRVKV +DI +PL+R   LK+  
Subjt:  RRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDR-VWGESLRVKVTMDIKKPLRRGTNLKVGS

Query:  MAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDEEEEDT--QYGPWLR----EHSMFKTKSKGKQPLKGNRSTREEEEDKNNEE
              + +  E+L +FCY CGR+GH +NDC + D + +  + +  ++G WLR    E  M+K+ S+G     G + T EE  + +N+E
Subjt:  MAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDEEEEDT--QYGPWLR----EHSMFKTKSKGKQPLKGNRSTREEEEDKNNEE

A0A6J1BSZ1 uncharacterized protein LOC1110054818.9e-2941.14Show/hide
Query:  AENKKKSNRRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRG
        + ++ +  R GPW +D+A+I+ D P    +   ++FR  S WVHF  L + C+N+  A  LGN+IG F  +E  +  +  WG  LRV+V  D+ KPL RG
Subjt:  AENKKKSNRRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRG

Query:  TNLKVGSMAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDEEEEDTQYGPWLR
          L +       WIPI  E+LPDF Y CGRL H++ DC  +   D   ++ QYGPWLR
Subjt:  TNLKVGSMAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDEEEEDTQYGPWLR

A0A6J1DU55 uncharacterized protein LOC1110231356.6e-3239.7Show/hide
Query:  RRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRGTNLKVGSM
        + GPW +DKA+I+  +P  ++ I  LEF   +FW+H   LP+  LN+  A+ LGN+IG FV + + +E+   WG SLR++V +DI KPLRRG  + +   
Subjt:  RRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVWGESLRVKVTMDIKKPLRRGTNLKVGSM

Query:  AEETWIPITIEKLPDFCYQCGRLGHVMNDCKEE--DNEDEEEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREE---EEDKNNEEQ-VEEISKLLSE
            WIPI  E+LPDFCY CG +GH  +DC       +D+    ++YGPWLR      +K+  ++  KG    RE+       N++E+ VEE  + LSE
Subjt:  AEETWIPITIEKLPDFCYQCGRLGHVMNDCKEE--DNEDEEEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREE---EEDKNNEEQ-VEEISKLLSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAAACTGAAGAGGAAAAGGGAGGGGTTGTTGAAGTAGAAGACAATGATATTGACAGTACAGACAAAGACATGAAGAAAGTTGCAGAAAACAAAAAGAAGAGTAA
TCGAAGGGGACCATGGATATACGACAAAGCAGTCATATTGTTCGATGAACCTAAAGGGAACCGAGAAATCGACGCTCTGGAATTCAGGTACGCAAGCTTTTGGGTTCATT
TTCATAAGCTACCTGTGGTGTGTCTAAACAGGAAATACGCGATGGCGCTGGGCAACTCAATTGGAACTTTTGTGAAAATGGAGGAGATTGACGAAGAAGATAGGGTCTGG
GGAGAATCATTAAGAGTCAAAGTCACAATGGATATTAAGAAACCCCTAAGAAGAGGAACAAACTTAAAAGTGGGCTCGATGGCAGAAGAAACATGGATCCCAATAACAAT
CGAAAAACTCCCAGACTTTTGTTATCAATGTGGAAGGCTAGGCCATGTTATGAACGATTGCAAAGAAGAAGACAACGAAGATGAAGAGGAAGAAGATACTCAGTATGGGC
CATGGCTCAGGGAACACTCGATGTTTAAAACAAAATCCAAAGGAAAGCAGCCGTTAAAGGGAAATAGATCCACTCGAGAGGAGGAAGAAGATAAAAACAACGAAGAACAA
GTAGAAGAGATCTCAAAGTTGCTATCAGAGGTAATCGGAGCAGCAACCGGAAATCACCGACCGAAAAACCACCGACTACCTCCAGAGGCACAAGACGAAAAAGACAAAGA
TGTCAGTGATAGTACAAAGCAGAACGTGCAGGCGGCAGGGCCAACAGGGAATATAGCCGTTAAGGCCAAAAGCTGGAAACAAATCCGGAAAAGGAGCCAAAAAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAAACTGAAGAGGAAAAGGGAGGGGTTGTTGAAGTAGAAGACAATGATATTGACAGTACAGACAAAGACATGAAGAAAGTTGCAGAAAACAAAAAGAAGAGTAA
TCGAAGGGGACCATGGATATACGACAAAGCAGTCATATTGTTCGATGAACCTAAAGGGAACCGAGAAATCGACGCTCTGGAATTCAGGTACGCAAGCTTTTGGGTTCATT
TTCATAAGCTACCTGTGGTGTGTCTAAACAGGAAATACGCGATGGCGCTGGGCAACTCAATTGGAACTTTTGTGAAAATGGAGGAGATTGACGAAGAAGATAGGGTCTGG
GGAGAATCATTAAGAGTCAAAGTCACAATGGATATTAAGAAACCCCTAAGAAGAGGAACAAACTTAAAAGTGGGCTCGATGGCAGAAGAAACATGGATCCCAATAACAAT
CGAAAAACTCCCAGACTTTTGTTATCAATGTGGAAGGCTAGGCCATGTTATGAACGATTGCAAAGAAGAAGACAACGAAGATGAAGAGGAAGAAGATACTCAGTATGGGC
CATGGCTCAGGGAACACTCGATGTTTAAAACAAAATCCAAAGGAAAGCAGCCGTTAAAGGGAAATAGATCCACTCGAGAGGAGGAAGAAGATAAAAACAACGAAGAACAA
GTAGAAGAGATCTCAAAGTTGCTATCAGAGGTAATCGGAGCAGCAACCGGAAATCACCGACCGAAAAACCACCGACTACCTCCAGAGGCACAAGACGAAAAAGACAAAGA
TGTCAGTGATAGTACAAAGCAGAACGTGCAGGCGGCAGGGCCAACAGGGAATATAGCCGTTAAGGCCAAAAGCTGGAAACAAATCCGGAAAAGGAGCCAAAAAAGCTGA
Protein sequenceShow/hide protein sequence
MKQTEEEKGGVVEVEDNDIDSTDKDMKKVAENKKKSNRRGPWIYDKAVILFDEPKGNREIDALEFRYASFWVHFHKLPVVCLNRKYAMALGNSIGTFVKMEEIDEEDRVW
GESLRVKVTMDIKKPLRRGTNLKVGSMAEETWIPITIEKLPDFCYQCGRLGHVMNDCKEEDNEDEEEEDTQYGPWLREHSMFKTKSKGKQPLKGNRSTREEEEDKNNEEQ
VEEISKLLSEVIGAATGNHRPKNHRLPPEAQDEKDKDVSDSTKQNVQAAGPTGNIAVKAKSWKQIRKRSQKS