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Lag0005834 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005834
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:31516050..31516409
RNA-Seq ExpressionLag0005834
SyntenyLag0005834
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO60252.1 reverse transcriptase [Corchorus capsularis]2.3e-1442.99Show/hide
Query:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN
        +NL KS  + + N S    +E+S  L + ++S+LG YLG+ A  GK ++     +KERV S +Q WK K+ S GG+E+L++A+A AIP Y MSCFK P +
Subjt:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN

Query:  ISTKRST
        +  K +T
Subjt:  ISTKRST

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]8.6e-1749.02Show/hide
Query:  MINLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPS
        M+N EKSM M +RN S   A+ I   L V  ++ +G YLGL +   + K  +F  +  RV   LQ WK KLFS GGKE+LI+A+A AIPNY+MSCF+ P 
Subjt:  MINLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPS

Query:  NI
        N+
Subjt:  NI

XP_024156375.1 uncharacterized protein LOC112164413 [Rosa chinensis]3.1e-1442.57Show/hide
Query:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN
        INLEKS  + + N+     + ++ +L VK     GLYLGL  H+G  K ++F  LKER+   L SW+ K+ S GGKEIL++ +A A+PNY M+C+ +P +
Subjt:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN

Query:  I
        +
Subjt:  I

XP_024178556.2 uncharacterized protein LOC112184522 [Rosa chinensis]1.4e-1440.59Show/hide
Query:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN
        INL+KS  + + N++  + +E++ +L V+  +  GLYLGL  H+G+ K  +F  LKER+   L SW+ K+ S+GGKE+LI+ +A  +PNY M+C+ +P +
Subjt:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN

Query:  I
        +
Subjt:  I

XP_024196657.1 uncharacterized protein LOC112199901 [Rosa chinensis]3.1e-1441.58Show/hide
Query:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN
        INL+KS  + + N+    +++++ VL VK     G+YLGL  H+G  K  +F  LKER+   L SW+ K+ S GGKE+LI+A+A  +PNY M+C+ +P +
Subjt:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN

Query:  I
        +
Subjt:  I

TrEMBL top hitse value%identityAlignment
A0A1R3GQA2 Reverse transcriptase1.1e-1442.99Show/hide
Query:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN
        +NL KS  + + N S    +E+S  L + ++S+LG YLG+ A  GK ++     +KERV S +Q WK K+ S GG+E+L++A+A AIP Y MSCFK P +
Subjt:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN

Query:  ISTKRST
        +  K +T
Subjt:  ISTKRST

A0A2N9EK17 Reverse transcriptase domain-containing protein1.0e-1545.19Show/hide
Query:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN
        +N EKS    ++N       +IS +L   L+S+ G YLGL   +G+KKR  F + K R+   LQ WKGKL S  G+E+LI+A+A+AIP Y MSCFKIP  
Subjt:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN

Query:  ISTK
        + ++
Subjt:  ISTK

A0A6J1CV63 uncharacterized protein LOC1110146624.2e-1749.02Show/hide
Query:  MINLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPS
        M+N EKSM M +RN S   A+ I   L V  ++ +G YLGL +   + K  +F  +  RV   LQ WK KLFS GGKE+LI+A+A AIPNY+MSCF+ P 
Subjt:  MINLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPS

Query:  NI
        N+
Subjt:  NI

A0A803PRV5 Uncharacterized protein1.7e-1544.55Show/hide
Query:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN
        +NLEKS     + IS+TQ   ++  L V++ S    YLGL + +G++K+ +F  +KE+V S L+ WK  +FS  GKEILI+A+  AIP+YTMSCF++P  
Subjt:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN

Query:  I
        +
Subjt:  I

A0A803QCP7 Uncharacterized protein5.1e-1542.73Show/hide
Query:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN
        INLEKS     + I+A Q   ++  L V+L S+   YLGL + +G++K+ +F  +K++V + L+ WK  +FS  G+EILI+AI  AIP+YTMSCF++P  
Subjt:  INLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSN

Query:  ISTKRSTKLA
        +  K  T  A
Subjt:  ISTKRSTKLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAACTTAGAAAAGTCTATGTGCATGACCAACAGAAATATTAGTGCGACGCAAGCTTCTGAAATCAGCAAAGTGCTTACAGTCAAGCTGTCAAGCTCTTTGGGCCT
TTATTTAGGCCTTCTAGCTCACTTGGGGAAGAAAAAACGAAACATGTTCAGAAAGCTCAAGGAGAGAGTTTTGAGTGTTCTGCAAAGCTGGAAAGGAAAACTCTTTTCCT
TGGGAGGAAAGGAAATTCTCATCGAGGCCATTGCACATGCAATCCCAAACTATACCATGAGTTGTTTCAAAATTCCCAGCAACATATCTACGAAGAGATCAACAAAACTT
GCGCTAGGTTCTGGTGGGATCGACCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAACTTAGAAAAGTCTATGTGCATGACCAACAGAAATATTAGTGCGACGCAAGCTTCTGAAATCAGCAAAGTGCTTACAGTCAAGCTGTCAAGCTCTTTGGGCCT
TTATTTAGGCCTTCTAGCTCACTTGGGGAAGAAAAAACGAAACATGTTCAGAAAGCTCAAGGAGAGAGTTTTGAGTGTTCTGCAAAGCTGGAAAGGAAAACTCTTTTCCT
TGGGAGGAAAGGAAATTCTCATCGAGGCCATTGCACATGCAATCCCAAACTATACCATGAGTTGTTTCAAAATTCCCAGCAACATATCTACGAAGAGATCAACAAAACTT
GCGCTAGGTTCTGGTGGGATCGACCAATGA
Protein sequenceShow/hide protein sequence
MINLEKSMCMTNRNISATQASEISKVLTVKLSSSLGLYLGLLAHLGKKKRNMFRKLKERVLSVLQSWKGKLFSLGGKEILIEAIAHAIPNYTMSCFKIPSNISTKRSTKL
ALGSGGIDQ