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Lag0005835 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005835
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein, putative, unclassified
Genome locationchr6:31516628..31516948
RNA-Seq ExpressionLag0005835
SyntenyLag0005835
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4403919.1 hypothetical protein G4B88_014375 [Cannabis sativa]3.1e-1030.61Show/hide
Query:  KNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKD
        + ++WG+ + ++  RWK+ N + +     PW+       PL  N      +V D+IN+D QW+ + +   FL SD   I+R+P   + Q+D++IW  D
Subjt:  KNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKD

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.5e-0930.1Show/hide
Query:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDII-NEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGK
        +W+++LWGR + K+  RW+I N   V++  D W+ N+  +  L    +    RV  ++ +E+G W  +++R+ F   +A  IL +P  +  +ED +IW  
Subjt:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDII-NEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGK

Query:  DPT
        + T
Subjt:  DPT

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]8.5e-1638.61Show/hide
Query:  WKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKDP
        W+++LWGR +FK+ YRWK+ N   + L  DPW+  +G  +P+  +  ++   V  ++   G+W+E  +RE+F+ S+AD IL+ P     ++DEIIWG D 
Subjt:  WKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKDP

Query:  T
        T
Subjt:  T

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]2.6e-0932Show/hide
Query:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKD
        VW++++WGR +  +  RW+I N + V +  + WI       P+    +     V ++I+E  QW E+LI + F   DA++I+++P  K  +ED++IW  D
Subjt:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKD

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.4e-1032Show/hide
Query:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKD
        +W++++WGR + K+  RW+I N K++ +  D W+       P+    +     V D+I  D QW+E  +R+ FL  D   IL++P    + EDE++W  D
Subjt:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKD

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189547.5e-1030.1Show/hide
Query:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDII-NEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGK
        +W+++LWGR + K+  RW+I N   V++  D W+ N+  +  L    +    RV  ++ +E+G W  +++R+ F   +A  IL +P  +  +ED +IW  
Subjt:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDII-NEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGK

Query:  DPT
        + T
Subjt:  DPT

A0A6J1DRA0 uncharacterized protein LOC1110224234.1e-1638.61Show/hide
Query:  WKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKDP
        W+++LWGR +FK+ YRWK+ N   + L  DPW+  +G  +P+  +  ++   V  ++   G+W+E  +RE+F+ S+AD IL+ P     ++DEIIWG D 
Subjt:  WKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKDP

Query:  T
        T
Subjt:  T

A0A7J6IA95 Uncharacterized protein1.5e-1030.61Show/hide
Query:  KNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKD
        + ++WG+ + ++  RWK+ N + +     PW+       PL  N      +V D+IN+D QW+ + +   FL SD   I+R+P   + Q+D++IW  D
Subjt:  KNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKD

A0A803P9P5 Uncharacterized protein5.7e-1029.59Show/hide
Query:  MVWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIW
        + W++++WG+ +  +  RWK+ N  Q+    DPW+       PL         +V ++I    QWN  L+++ FL SD   I  +P     Q D++IW
Subjt:  MVWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIW

A0A803PM68 Uncharacterized protein1.2e-1034.02Show/hide
Query:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIW
        VW++++WG+ + ++ YRW+I N   V + +DPW+             + +G  V D++  +G+W+EE IR  F  +DA+ IL MP  +   ED+I+W
Subjt:  VWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGGAAGAACATGCTTTGGGGTCGATCCATGTTCAAAGAATGGTACAGATGGAAGATAGAAAATCGCAAGCAAGTTTATTTAGACCAAGATCCTTGGATTATCAA
TGAAGGCGGCATGACTCCCCTATGTGTAAACGAGGTCCTCAAAGGTAAAAGGGTGTTTGACATTATCAACGAAGATGGCCAATGGAATGAAGAGCTCATCCGTGAAGCTT
TCCTCTCATCTGATGCGGACTCTATCTTGAGGATGCCAAGGAGGAAGTCGAGGCAAGAGGATGAAATCATTTGGGGCAAAGATCCGACCTTTTTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGGAAGAACATGCTTTGGGGTCGATCCATGTTCAAAGAATGGTACAGATGGAAGATAGAAAATCGCAAGCAAGTTTATTTAGACCAAGATCCTTGGATTATCAA
TGAAGGCGGCATGACTCCCCTATGTGTAAACGAGGTCCTCAAAGGTAAAAGGGTGTTTGACATTATCAACGAAGATGGCCAATGGAATGAAGAGCTCATCCGTGAAGCTT
TCCTCTCATCTGATGCGGACTCTATCTTGAGGATGCCAAGGAGGAAGTCGAGGCAAGAGGATGAAATCATTTGGGGCAAAGATCCGACCTTTTTTTTGTGA
Protein sequenceShow/hide protein sequence
MVWKNMLWGRSMFKEWYRWKIENRKQVYLDQDPWIINEGGMTPLCVNEVLKGKRVFDIINEDGQWNEELIREAFLSSDADSILRMPRRKSRQEDEIIWGKDPTFFL