; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005854 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005854
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPhotosystem I reaction center subunit IV
Genome locationchr6:32127689..32129065
RNA-Seq ExpressionLag0005854
SyntenyLag0005854
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
InterPro domainsIPR003375 - Photosystem I PsaE, reaction centre subunit IV
IPR008990 - Electron transport accessory-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441802.1 PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo]1.6e-5790.97Show/hide
Query:  MAASNLSCIASGVVIPSPTTI-SSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK
        MAASNLSCIASGVVIPS TTI SSSSRLSS+AFFPKNS+S+SRSSRLVIRAAA D A PPP AAA A A AEEPKPKPAPIGPKRGAKVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSPTTI-SSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_022144405.1 photosystem I reaction center subunit IV, chloroplastic-like [Momordica charantia]2.1e-5788.81Show/hide
Query:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAA+NLSCIASGVVIPS  TISSSSRL+SVAFFPKN + +SR  RLVIRAAA++AAPPPPAAAATADAP EE KPKPAPIGPKRGAKVKILR+ESYWYKD
Subjt:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDE+EEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_022937722.1 photosystem I reaction center subunit IV, chloroplastic-like [Cucurbita moschata]7.6e-6091.61Show/hide
Query:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPS TTISSSSR SSVAFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILRRESYWYKD
Subjt:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_022965997.1 photosystem I reaction center subunit IV, chloroplastic-like [Cucurbita maxima]4.9e-5990.91Show/hide
Query:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPS  TISSSSR SSVAFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILRRESYWYKD
Subjt:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_023536804.1 photosystem I reaction center subunit IV, chloroplastic-like [Cucurbita pepo subsp. pepo]8.4e-5990.21Show/hide
Query:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPS  TISSSSR SSVAFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILR+ESYWYKD
Subjt:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ1 Uncharacterized protein1.8e-5487.5Show/hide
Query:  MAASNLSCIASGVVIPSPTTI-SSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK
        MAASNLSCIASGVVIPS TTI SSSSRLSS+AFFPKNS+S+SRSSRLVIRA+  D A PPPAA A   A  EEPKPKPAPIGPKRGAKVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSPTTI-SSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A1S3B3T3 photosystem I reaction center subunit IV, chloroplastic-like7.6e-5890.97Show/hide
Query:  MAASNLSCIASGVVIPSPTTI-SSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK
        MAASNLSCIASGVVIPS TTI SSSSRLSS+AFFPKNS+S+SRSSRLVIRAAA D A PPP AAA A A AEEPKPKPAPIGPKRGAKVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSPTTI-SSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1CRI6 photosystem I reaction center subunit IV, chloroplastic-like1.0e-5788.81Show/hide
Query:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAA+NLSCIASGVVIPS  TISSSSRL+SVAFFPKN + +SR  RLVIRAAA++AAPPPPAAAATADAP EE KPKPAPIGPKRGAKVKILR+ESYWYKD
Subjt:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDE+EEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1FC09 photosystem I reaction center subunit IV, chloroplastic-like3.7e-6091.61Show/hide
Query:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPS TTISSSSR SSVAFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILRRESYWYKD
Subjt:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1HLT8 photosystem I reaction center subunit IV, chloroplastic-like2.4e-5990.91Show/hide
Query:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD
        MAASNLSCIASGV+IPS  TISSSSR SSVAFFPKNS S+SRS RLV+RAAA++AA PPPAAAATADAPAE PKPKPAPIGPKRG KVKILRRESYWYKD
Subjt:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

SwissProt top hitse value%identityAlignment
P12354 Photosystem I reaction center subunit IV, chloroplastic4.1e-3264.75Show/hide
Query:  SSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVVTVDQDPNTRYPVVVRF
        S + RL      P  + S  RS+RLV+RAA E AA P   AAA+ +  A +   KP PIGPKRG+KV+I+R+ESYWYK VGSVV VDQDP TRYPVVVRF
Subjt:  SSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVVTVDQDPNTRYPVVVRF

Query:  NKVNYASVSTNNYALDEIEEVA
        NKVNYA+VSTNNYALDEI+EVA
Subjt:  NKVNYASVSTNNYALDEIEEVA

Q41228 Photosystem I reaction center subunit IV A, chloroplastic9.7e-3460.42Show/hide
Query:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWY
        MA+ N++  AS  ++ +P   S+++   +   F  + +  S + RLV+RAA E A   PPAAAATA+ PAE P    KP PIGPKRG KV+ILR+ESYWY
Subjt:  MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWY

Query:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
        K  GSVV  DQDPNTRYPVVVRFNKVNYA+VSTNNYALDEIEEV
Subjt:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q41229 Photosystem I reaction center subunit IV B, chloroplastic4.3e-3459.31Show/hide
Query:  MAASNLSCIASGVVIPSP--TTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPK-PKPAPIGPKRGAKVKILRRESYW
        MA+S+++  ASG ++ +P   T +++ R S + F    +++ +   RLV+RAA E A   PPAA ATA+  A   K  KP PIGPKRG KV++LR+ESYW
Subjt:  MAASNLSCIASGVVIPSP--TTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPK-PKPAPIGPKRGAKVKILRRESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
        YK VGSVV VDQDPNTRYPVVVRFNKVNYA+VSTNNYALDE+EEV
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q9S714 Photosystem I reaction center subunit IV B, chloroplastic2.5e-2959.12Show/hide
Query:  IPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAAT-------ADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWYKDVGSVV
        +P+     SS   + V+F P  S      SRLV+RAA +     PPA A++       A APA+ P  K KP PIGPKRG+KVKILR+ESYWYK+VGSVV
Subjt:  IPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAAT-------ADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEV
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q9S831 Photosystem I reaction center subunit IV A, chloroplastic6.9e-3263.77Show/hide
Query:  VIPSPTT--ISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAP------PPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVV
        V+P+  T    +SS  SSV+F P      +  SRLV+R AAED AP        PAAAA  D  A   KPKP PIGPKRG+KVKILRRESYW+K+VGSVV
Subjt:  VIPSPTT--ISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAP------PPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

Arabidopsis top hitse value%identityAlignment
AT2G20260.1 photosystem I subunit E-21.8e-3059.12Show/hide
Query:  IPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAAT-------ADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWYKDVGSVV
        +P+     SS   + V+F P  S      SRLV+RAA +     PPA A++       A APA+ P  K KP PIGPKRG+KVKILR+ESYWYK+VGSVV
Subjt:  IPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAAT-------ADAPAEEP--KPKPAPIGPKRGAKVKILRRESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEV
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

AT4G28750.1 Photosystem I reaction centre subunit IV / PsaE protein4.9e-3363.77Show/hide
Query:  VIPSPTT--ISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAP------PPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVV
        V+P+  T    +SS  SSV+F P      +  SRLV+R AAED AP        PAAAA  D  A   KPKP PIGPKRG+KVKILRRESYW+K+VGSVV
Subjt:  VIPSPTT--ISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAP------PPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCTAACCTTTCATGCATTGCTTCTGGGGTGGTCATTCCTTCTCCAACCACCATTTCATCCTCTTCTAGGTTATCTTCTGTCGCCTTTTTCCCCAAGAATTC
CCACTCCCTTTCAAGATCATCCAGATTGGTTATCCGGGCCGCCGCCGAAGACGCTGCTCCCCCACCCCCTGCTGCCGCCGCCACCGCCGATGCCCCAGCCGAAGAGCCTA
AGCCTAAGCCTGCCCCAATTGGCCCTAAGAGAGGTGCCAAGGTCAAGATTCTAAGGAGAGAGTCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGAC
CCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTCTAACCTTTCATGCATTGCTTCTGGGGTGGTCATTCCTTCTCCAACCACCATTTCATCCTCTTCTAGGTTATCTTCTGTCGCCTTTTTCCCCAAGAATTC
CCACTCCCTTTCAAGATCATCCAGATTGGTTATCCGGGCCGCCGCCGAAGACGCTGCTCCCCCACCCCCTGCTGCCGCCGCCACCGCCGATGCCCCAGCCGAAGAGCCTA
AGCCTAAGCCTGCCCCAATTGGCCCTAAGAGAGGTGCCAAGGTCAAGATTCTAAGGAGAGAGTCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGAC
CCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA
Protein sequenceShow/hide protein sequence
MAASNLSCIASGVVIPSPTTISSSSRLSSVAFFPKNSHSLSRSSRLVIRAAAEDAAPPPPAAAATADAPAEEPKPKPAPIGPKRGAKVKILRRESYWYKDVGSVVTVDQD
PNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA