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Lag0005890 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005890
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr6:33176079..33176918
RNA-Seq ExpressionLag0005890
SyntenyLag0005890
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]5.2e-6147.96Show/hide
Query:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-------------------------GPTGGGSSRKRKAI
        MEI+   LL++P RM +   +R K +YCLFHRDH H+T++C  LK E++ LIQ GYLKE+V                         GP      RKRKA 
Subjt:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-------------------------GPTGGGSSRKRKAI

Query:  AREARSEPEYRGMYSVHLAKAHPSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTP
         RE R+      +Y   +AK    +EF+E EA  +  PHND LV+TL +AN K+HRIL+DGGSSAD++SL A+KAM L     K S   LV F GERV P
Subjt:  AREARSEPEYRGMYSVHLAKAHPSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTP

Query:  EGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
        EG  EL VTFG G  ++T +++FLV+D  S+YNAIL RPT+H +KAI STYHQ + FPT  G+G +K E
Subjt:  EGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]1.8e-6151.84Show/hide
Query:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-GPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAHPS
        +EI++  LLK+P RMK+   +R K +YC FH DH H+T++C  LK+E+E LIQ GYLKE+V  P    + R+R+A          Y+ +Y   + +    
Subjt:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-GPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAHPS

Query:  LEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFL
        +EF E E   I  PHNDALV+ L +AN K+H IL+DGGSS D++SL A+K M L    LK S  PLVGFGGE V PEG IELPVTFG G  ++TKM++FL
Subjt:  LEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFL

Query:  VVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
        VVD  S+ NAIL RPT+H +KAI S YHQ +KFPT  G+G +KGE
Subjt:  VVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]1.2e-6252.63Show/hide
Query:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV---GPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAH
        MEI++  LLK+P RMK+   +R K QY LFHRDHGH+T++C  LK+E+E LI++GYLKE+V     T  G +     + RE R+  E          +  
Subjt:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV---GPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAH

Query:  PSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMIN
          LEF+E EA  +  PHNDALV+TL +AN K+HRIL+DGGSS  ++SL A+KAM L  + LK S  PLVGFGGERV PEG IELPV FG G  ++ KM++
Subjt:  PSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMIN

Query:  FLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
        FLVV   S+YN IL RP +H +K I STYHQ +KFPT++G+G +KGE
Subjt:  FLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]3.7e-6754.92Show/hide
Query:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFVGPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAHPSL
        MEI++  LLK+P RMK+ + +R K +YCLFHRDH H+T++C  LK+E+E LI+ GYLKE           K+KA  REAR+  E   +Y  ++     ++
Subjt:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFVGPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAHPSL

Query:  EFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLV
        EF+E EA  +   HNDALV+TL +ANVK+HRIL+DGGSSAD++S  A+KAM LE ++LK S  PLVGFGGERV  EG IELPVTFG G   VTKM++FLV
Subjt:  EFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLV

Query:  VDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
        V+  S+YN IL R T+H +K I STYHQ +KFPT  GV  +KGE
Subjt:  VDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]2.8e-6249.41Show/hide
Query:  MKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-------------------------GPTGGGSSRKRKAIAREARSEPEYRGMY
        MK+  ++R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V                         GPT     +KRKA  +EAR+ P Y  +Y
Subjt:  MKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-------------------------GPTGGGSSRKRKAIAREARSEPEYRGMY

Query:  SVHLAKAHPSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQ
                  ++F+E E   +  PHNDALV+TL + N K+HRIL+DGGSS  ++SL A+KAM L  + LK +L PLVGFGGERV  +  I+LPVTFG+G 
Subjt:  SVHLAKAHPSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQ

Query:  NAVTKMINFLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
          +TK++ FLVVD  S+YNAIL RPT+H +KAI STYH+ LKFPT  G+  VKGE
Subjt:  NAVTKMINFLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

TrEMBL top hitse value%identityAlignment
A0A6J1D8C9 uncharacterized protein LOC1110183002.5e-6147.96Show/hide
Query:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-------------------------GPTGGGSSRKRKAI
        MEI+   LL++P RM +   +R K +YCLFHRDH H+T++C  LK E++ LIQ GYLKE+V                         GP      RKRKA 
Subjt:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-------------------------GPTGGGSSRKRKAI

Query:  AREARSEPEYRGMYSVHLAKAHPSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTP
         RE R+      +Y   +AK    +EF+E EA  +  PHND LV+TL +AN K+HRIL+DGGSSAD++SL A+KAM L     K S   LV F GERV P
Subjt:  AREARSEPEYRGMYSVHLAKAHPSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTP

Query:  EGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
        EG  EL VTFG G  ++T +++FLV+D  S+YNAIL RPT+H +KAI STYHQ + FPT  G+G +K E
Subjt:  EGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

A0A6J1DAK4 uncharacterized protein LOC1110189028.7e-6251.84Show/hide
Query:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-GPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAHPS
        +EI++  LLK+P RMK+   +R K +YC FH DH H+T++C  LK+E+E LIQ GYLKE+V  P    + R+R+A          Y+ +Y   + +    
Subjt:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-GPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAHPS

Query:  LEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFL
        +EF E E   I  PHNDALV+ L +AN K+H IL+DGGSS D++SL A+K M L    LK S  PLVGFGGE V PEG IELPVTFG G  ++TKM++FL
Subjt:  LEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFL

Query:  VVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
        VVD  S+ NAIL RPT+H +KAI S YHQ +KFPT  G+G +KGE
Subjt:  VVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

A0A6J1DP33 uncharacterized protein LOC1110228866.0e-6352.63Show/hide
Query:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV---GPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAH
        MEI++  LLK+P RMK+   +R K QY LFHRDHGH+T++C  LK+E+E LI++GYLKE+V     T  G +     + RE R+  E          +  
Subjt:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV---GPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAH

Query:  PSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMIN
          LEF+E EA  +  PHNDALV+TL +AN K+HRIL+DGGSS  ++SL A+KAM L  + LK S  PLVGFGGERV PEG IELPV FG G  ++ KM++
Subjt:  PSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMIN

Query:  FLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
        FLVV   S+YN IL RP +H +K I STYHQ +KFPT++G+G +KGE
Subjt:  FLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

A0A6J1DRG9 uncharacterized protein LOC1110235871.8e-6754.92Show/hide
Query:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFVGPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAHPSL
        MEI++  LLK+P RMK+ + +R K +YCLFHRDH H+T++C  LK+E+E LI+ GYLKE           K+KA  REAR+  E   +Y  ++     ++
Subjt:  MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFVGPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAHPSL

Query:  EFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLV
        EF+E EA  +   HNDALV+TL +ANVK+HRIL+DGGSSAD++S  A+KAM LE ++LK S  PLVGFGGERV  EG IELPVTFG G   VTKM++FLV
Subjt:  EFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLV

Query:  VDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
        V+  S+YN IL R T+H +K I STYHQ +KFPT  GV  +KGE
Subjt:  VDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

A0A6J1DV51 uncharacterized protein LOC1110246621.3e-6249.41Show/hide
Query:  MKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-------------------------GPTGGGSSRKRKAIAREARSEPEYRGMY
        MK+  ++R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V                         GPT     +KRKA  +EAR+ P Y  +Y
Subjt:  MKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFV-------------------------GPTGGGSSRKRKAIAREARSEPEYRGMY

Query:  SVHLAKAHPSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQ
                  ++F+E E   +  PHNDALV+TL + N K+HRIL+DGGSS  ++SL A+KAM L  + LK +L PLVGFGGERV  +  I+LPVTFG+G 
Subjt:  SVHLAKAHPSLEFTEVEAASIHQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQ

Query:  NAVTKMINFLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE
          +TK++ FLVVD  S+YNAIL RPT+H +KAI STYH+ LKFPT  G+  VKGE
Subjt:  NAVTKMINFLVVDCMSAYNAILERPTLHEMKAIASTYHQLLKFPTTNGVGVVKGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCCGAAATACGGGCCTCCTGAAATTCCCAGGGAGGATGAAGTCGAGTGCCGACAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGGACCATGGGCATTC
AACCAAGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATCCAGAATGGGTATTTGAAAGAGTTCGTCGGACCAACTGGAGGAGGTTCGAGCAGGAAGAGGAAAG
CCATTGCTAGGGAAGCAAGGTCCGAACCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGGCACACCCCTCTTTGGAGTTCACTGAGGTTGAGGCAGCAAGCATT
CACCAGCCACATAATGATGCCCTGGTGGTCACTCTAGTTGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCGGC
CTTTAAGGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTCGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTGTGA
CGTTTGGGGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTGGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGAAAGGCCAACCTTGCATGAAATGAAG
GCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTACGAATGGTGTGGGAGTTGTCAAAGGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCCGAAATACGGGCCTCCTGAAATTCCCAGGGAGGATGAAGTCGAGTGCCGACAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGGACCATGGGCATTC
AACCAAGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATCCAGAATGGGTATTTGAAAGAGTTCGTCGGACCAACTGGAGGAGGTTCGAGCAGGAAGAGGAAAG
CCATTGCTAGGGAAGCAAGGTCCGAACCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGGCACACCCCTCTTTGGAGTTCACTGAGGTTGAGGCAGCAAGCATT
CACCAGCCACATAATGATGCCCTGGTGGTCACTCTAGTTGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCGGC
CTTTAAGGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTCGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTGTGA
CGTTTGGGGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTGGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGAAAGGCCAACCTTGCATGAAATGAAG
GCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTACGAATGGTGTGGGAGTTGTCAAAGGAGAGTAG
Protein sequenceShow/hide protein sequence
MEIRNTGLLKFPGRMKSSADRRDKSQYCLFHRDHGHSTKNCIQLKDEIEALIQNGYLKEFVGPTGGGSSRKRKAIAREARSEPEYRGMYSVHLAKAHPSLEFTEVEAASI
HQPHNDALVVTLVVANVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTPLVGFGGERVTPEGSIELPVTFGDGQNAVTKMINFLVVDCMSAYNAILERPTLHEMK
AIASTYHQLLKFPTTNGVGVVKGE