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Lag0005916 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005916
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr6:33702415..33702771
RNA-Seq ExpressionLag0005916
SyntenyLag0005916
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.3e-1243.52Show/hide
Query:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE
        K+ +++ +RS      S+ +KR R+ +      D  +KFEK T T +P EQ+LMEI+N  LL  P ++ +S  KR KG+YCLFH DHGH+T++   LK E
Subjt:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE

Query:  IEALIQNG
        +E LI  G
Subjt:  IEALIQNG

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]2.2e-1254.41Show/hide
Query:  KCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNEIEALIQNG
        K TPT +  EQ+LMEI++  LL  P ++K+ P KR KGQY LFHRDHGH+T++   LK E+E LI++G
Subjt:  KCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNEIEALIQNG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.7e-1546.3Show/hide
Query:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE
        K+ + + +RS      S+ +KR R+ +      D  RKFEK TPT +P EQ+LMEI++  LL  P ++K+S  KR KG+YCLFHRDHGH+T++   LK E
Subjt:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE

Query:  IEALIQNG
        +E LI+ G
Subjt:  IEALIQNG

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]4.2e-1645.22Show/hide
Query:  IEELLKSKKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRN
        +++ L+ K+ +++ +RS      SK +K+ R      G+ D  RKFEK TPT +P EQ+LMEI++  LL  P  +K+ P+KR KG+YCLFHRDHGH+T +
Subjt:  IEELLKSKKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRN

Query:  YIQLKNEIEALIQNG
           LK E+E LI+ G
Subjt:  YIQLKNEIEALIQNG

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]4.7e-1545.37Show/hide
Query:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE
        K+ +++ +RS      S+ +KR R+ +      D  RKFEK TPT +P EQ+LMEI++  LL  P ++K    KR KG+YCLFHRDH H+T++Y  LK E
Subjt:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE

Query:  IEALIQNG
        +E LI+ G
Subjt:  IEALIQNG

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128056.2e-1343.52Show/hide
Query:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE
        K+ +++ +RS      S+ +KR R+ +      D  +KFEK T T +P EQ+LMEI+N  LL  P ++ +S  KR KG+YCLFH DHGH+T++   LK E
Subjt:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE

Query:  IEALIQNG
        +E LI  G
Subjt:  IEALIQNG

A0A6J1DP33 uncharacterized protein LOC1110228861.1e-1254.41Show/hide
Query:  KCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNEIEALIQNG
        K TPT +  EQ+LMEI++  LL  P ++K+ P KR KGQY LFHRDHGH+T++   LK E+E LI++G
Subjt:  KCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNEIEALIQNG

A0A6J1DWY0 uncharacterized protein LOC1110252932.3e-1546.3Show/hide
Query:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE
        K+ + + +RS      S+ +KR R+ +      D  RKFEK TPT +P EQ+LMEI++  LL  P ++K+S  KR KG+YCLFHRDHGH+T++   LK E
Subjt:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE

Query:  IEALIQNG
        +E LI+ G
Subjt:  IEALIQNG

A0A6J1DYL6 uncharacterized protein LOC1110257852.3e-1545.37Show/hide
Query:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE
        K+ +++ +RS      S+ +KR R+ +      D  RKFEK TPT +P EQ+LMEI++  LL  P ++K    KR KG+YCLFHRDH H+T++Y  LK E
Subjt:  KKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNE

Query:  IEALIQNG
        +E LI+ G
Subjt:  IEALIQNG

A0A6J1DZ52 uncharacterized protein LOC1110256122.0e-1645.22Show/hide
Query:  IEELLKSKKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRN
        +++ L+ K+ +++ +RS      SK +K+ R      G+ D  RKFEK TPT +P EQ+LMEI++  LL  P  +K+ P+KR KG+YCLFHRDHGH+T +
Subjt:  IEELLKSKKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRN

Query:  YIQLKNEIEALIQNG
           LK E+E LI+ G
Subjt:  YIQLKNEIEALIQNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATAGAAGAGTTGCTCAAGTCAAAGAAGTTGGAACGAGAATACAAGAGATCTTCTTCATTCGACCACGAAAGTAAGAAGAAAAAAAGACAGCGGACAGACGAAGG
AGCCAGAGGCCGAGCAGACTACTTAAGGAAGTTTGAAAAGTGCACCCCTACCTTAATTCCACAGGAGCAGATCTTAATGGAAATTCGGAATACGAATCTCCTCAACGTAC
CCAGAAAGCTGAAGTCAAGTCCTGACAAAAGACACAAAGGCCAGTATTGTCTCTTCCATCGAGACCACGGGCATTCCACAAGAAACTACATCCAACTGAAGAATGAAATT
GAAGCACTGATTCAGAACGGTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATAGAAGAGTTGCTCAAGTCAAAGAAGTTGGAACGAGAATACAAGAGATCTTCTTCATTCGACCACGAAAGTAAGAAGAAAAAAAGACAGCGGACAGACGAAGG
AGCCAGAGGCCGAGCAGACTACTTAAGGAAGTTTGAAAAGTGCACCCCTACCTTAATTCCACAGGAGCAGATCTTAATGGAAATTCGGAATACGAATCTCCTCAACGTAC
CCAGAAAGCTGAAGTCAAGTCCTGACAAAAGACACAAAGGCCAGTATTGTCTCTTCCATCGAGACCACGGGCATTCCACAAGAAACTACATCCAACTGAAGAATGAAATT
GAAGCACTGATTCAGAACGGTATCTGA
Protein sequenceShow/hide protein sequence
MSIEELLKSKKLEREYKRSSSFDHESKKKKRQRTDEGARGRADYLRKFEKCTPTLIPQEQILMEIRNTNLLNVPRKLKSSPDKRHKGQYCLFHRDHGHSTRNYIQLKNEI
EALIQNGI