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Lag0005927 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005927
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMuDRA-like transposase
Genome locationchr6:33817806..33818722
RNA-Seq ExpressionLag0005927
SyntenyLag0005927
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]4.6e-2934.96Show/hide
Query:  IIRITDDRDVIWFMSNSSDYVSSGICVVVDHC-ETNASSTNTVSHQ------SVNHNLILQHGSSRNGGGIIDHVDVDLLSS----------VPTLNEDG
        +IRI DD+DV W M   S + ++ + +VVD    T+  +T  +S +      S   N+I+   +  +   +I HV V  + S          +  LN   
Subjt:  IIRITDDRDVIWFMSNSSDYVSSGICVVVDHC-ETNASSTNTVSHQ------SVNHNLILQHGSSRNGGGIIDHVDVDLLSS----------VPTLNEDG

Query:  EL---------------------------------WMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYD
        EL                                 W++ KF + H C +D+VKNDH+QAT+WIV EC K + ++N++  CRP DVI+YM+  +GVNI+YD
Subjt:  EL---------------------------------WMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYD

Query:  KARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN
        KA RG E+AL SIR +P+ SY+++ AFS A+I  NP TY A + ++
Subjt:  KARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]2.3e-2834.8Show/hide
Query:  NKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHC-ETNASSTNTVS------HQSVNHNLILQHGSSRNGGGIIDHVDVDLLSSVPT----------L
        N S +IRI DD+DV W M   S    + + +VVD    T+  +T  +S        S   N+I+   +  +   +I H+ V  +    T          L
Subjt:  NKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHC-ETNASSTNTVS------HQSVNHNLILQHGSSRNGGGIIDHVDVDLLSSVPT----------L

Query:  NEDGEL---------------------------------WMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVN
        N   EL                                 W+I KF + H C +D+VKNDH+QAT+WIV EC K + + N++  CRP DVI+YM+  +GVN
Subjt:  NEDGEL---------------------------------WMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVN

Query:  INYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN
        I+YDKA RG E+AL SI+ +P+ SY+++ AFS A+I  NP TY A + ++
Subjt:  INYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN

TYK21259.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]2.1e-2636.89Show/hide
Query:  MYRNVVNKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHCETNASSTNTVSHQSVNHNLILQHGSSRNGGGIIDHVDVDLLSSVPTLNEDGELWMICK
        +Y    N S  IRI DD++V W M   S +  + + +VVD          TV                     + D  +   +SS     ED       +
Subjt:  MYRNVVNKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHCETNASSTNTVSHQSVNHNLILQHGSSRNGGGIIDHVDVDLLSSVPTLNEDGELWMICK

Query:  FINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYI
          N H C +D+VKNDH+QAT+WIV EC K + + N++  C P DVI+YM+  +G NI+YDKA RG E+AL SIR +P+ SY+++ AFS A+I  NP TY 
Subjt:  FINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYI

Query:  AYDVNN
        A + ++
Subjt:  AYDVNN

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]3.0e-2851.33Show/hide
Query:  ELWMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIE
        ++W++ KF + H C +D+VKNDH+QAT+WIV EC K + + N++  CRP DVI+YM+  +GVNI+YDKA RG E+AL SIR +P+ SY+++ AFS A+I 
Subjt:  ELWMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIE

Query:  KNPSTYIAYDVNN
         NP TY A + ++
Subjt:  KNPSTYIAYDVNN

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]6.6e-2832.93Show/hide
Query:  NKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHC----------------ETNASSTNTV-----SHQSVNHNLILQHGSSRNGGGII----------
        N S +IRI DD+DV W M   S    + + VV+D                   T  S T  V     + +S N  + ++ GS      ++          
Subjt:  NKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHC----------------ETNASSTNTV-----SHQSVNHNLILQHGSSRNGGGII----------

Query:  ----------DHVDVDLLSSVP--------TLNEDGELWMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNI
                  +    D+    P        ++ +  ++W++ KFI  H C +D+VKNDH+QAT+WIV EC K + + N+++ CRP DVI+YM+  + VNI
Subjt:  ----------DHVDVDLLSSVP--------TLNEDGELWMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNI

Query:  NYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN
        +YDKA  G E+AL SIR +P+ SY+++ AFS A+I  NP TY A + ++
Subjt:  NYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958993.2e-2832.93Show/hide
Query:  NKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHC----------------ETNASSTNTV-----SHQSVNHNLILQHGSSRNGGGII----------
        N S +IRI DD+DV W M   S    + + VV+D                   T  S T  V     + +S N  + ++ GS      ++          
Subjt:  NKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHC----------------ETNASSTNTV-----SHQSVNHNLILQHGSSRNGGGII----------

Query:  ----------DHVDVDLLSSVP--------TLNEDGELWMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNI
                  +    D+    P        ++ +  ++W++ KFI  H C +D+VKNDH+QAT+WIV EC K + + N+++ CRP DVI+YM+  + VNI
Subjt:  ----------DHVDVDLLSSVP--------TLNEDGELWMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNI

Query:  NYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN
        +YDKA  G E+AL SIR +P+ SY+++ AFS A+I  NP TY A + ++
Subjt:  NYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN

A0A5A7V1Z6 CCHC-type domain-containing protein2.2e-2934.96Show/hide
Query:  IIRITDDRDVIWFMSNSSDYVSSGICVVVDHC-ETNASSTNTVSHQ------SVNHNLILQHGSSRNGGGIIDHVDVDLLSS----------VPTLNEDG
        +IRI DD+DV W M   S + ++ + +VVD    T+  +T  +S +      S   N+I+   +  +   +I HV V  + S          +  LN   
Subjt:  IIRITDDRDVIWFMSNSSDYVSSGICVVVDHC-ETNASSTNTVSHQ------SVNHNLILQHGSSRNGGGIIDHVDVDLLSS----------VPTLNEDG

Query:  EL---------------------------------WMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYD
        EL                                 W++ KF + H C +D+VKNDH+QAT+WIV EC K + ++N++  CRP DVI+YM+  +GVNI+YD
Subjt:  EL---------------------------------WMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYD

Query:  KARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN
        KA RG E+AL SIR +P+ SY+++ AFS A+I  NP TY A + ++
Subjt:  KARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like1.1e-2834.8Show/hide
Query:  NKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHC-ETNASSTNTVS------HQSVNHNLILQHGSSRNGGGIIDHVDVDLLSSVPT----------L
        N S +IRI DD+DV W M   S    + + +VVD    T+  +T  +S        S   N+I+   +  +   +I H+ V  +    T          L
Subjt:  NKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHC-ETNASSTNTVS------HQSVNHNLILQHGSSRNGGGIIDHVDVDLLSSVPT----------L

Query:  NEDGEL---------------------------------WMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVN
        N   EL                                 W+I KF + H C +D+VKNDH+QAT+WIV EC K + + N++  CRP DVI+YM+  +GVN
Subjt:  NEDGEL---------------------------------WMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVN

Query:  INYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN
        I+YDKA RG E+AL SI+ +P+ SY+++ AFS A+I  NP TY A + ++
Subjt:  INYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNN

A0A5D3DDB9 Protein FAR1-RELATED SEQUENCE 41.0e-2636.89Show/hide
Query:  MYRNVVNKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHCETNASSTNTVSHQSVNHNLILQHGSSRNGGGIIDHVDVDLLSSVPTLNEDGELWMICK
        +Y    N S  IRI DD++V W M   S +  + + +VVD          TV                     + D  +   +SS     ED       +
Subjt:  MYRNVVNKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHCETNASSTNTVSHQSVNHNLILQHGSSRNGGGIIDHVDVDLLSSVPTLNEDGELWMICK

Query:  FINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYI
          N H C +D+VKNDH+QAT+WIV EC K + + N++  C P DVI+YM+  +G NI+YDKA RG E+AL SIR +P+ SY+++ AFS A+I  NP TY 
Subjt:  FINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYI

Query:  AYDVNN
        A + ++
Subjt:  AYDVNN

A0A5D3E198 MuDRA-like transposase1.4e-2851.33Show/hide
Query:  ELWMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIE
        ++W++ KF + H C +D+VKNDH+QAT+WIV EC K + + N++  CRP DVI+YM+  +GVNI+YDKA RG E+AL SIR +P+ SY+++ AFS A+I 
Subjt:  ELWMICKFINRHECCIDIVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIE

Query:  KNPSTYIAYDVNN
         NP TY A + ++
Subjt:  KNPSTYIAYDVNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAGGAATGTGGTCAACAAATCAAATATAATCAGGATCACCGATGATAGGGATGTTATATGGTTTATGTCCAATAGCTCGGACTATGTGTCAAGCGGTATATGCGT
TGTTGTTGACCATTGTGAAACCAATGCTTCATCTACAAATACAGTGTCTCACCAGTCTGTCAACCATAATTTGATCCTCCAACATGGAAGTAGCAGAAATGGGGGTGGCA
TTATTGATCACGTGGATGTTGACCTGTTGTCATCAGTTCCAACGCTCAATGAAGATGGTGAGTTGTGGATGATTTGTAAATTCATCAATAGACATGAGTGTTGCATTGAT
ATTGTAAAGAATGATCATAGACAAGCCACAACTTGGATTGTTGGTGAGTGTGTCAAAGCACTATTAAGGGTGAACAACAGGATTCAGTGCCGCCCTCGTGATGTAATTGA
CTACATGAGAAGAAAGAATGGGGTTAACATCAACTACGATAAAGCGCGGAGGGGCCTTGAACTTGCACTTATTTCTATTCGGAGATCTCCAGATGTCTCTTACAGTCTCA
TCCCAGCATTCTCTGCTGCAATAATTGAGAAGAATCCAAGTACATATATAGCGTATGACGTCAACAATGTGTTGGGTTTTATGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATAGGAATGTGGTCAACAAATCAAATATAATCAGGATCACCGATGATAGGGATGTTATATGGTTTATGTCCAATAGCTCGGACTATGTGTCAAGCGGTATATGCGT
TGTTGTTGACCATTGTGAAACCAATGCTTCATCTACAAATACAGTGTCTCACCAGTCTGTCAACCATAATTTGATCCTCCAACATGGAAGTAGCAGAAATGGGGGTGGCA
TTATTGATCACGTGGATGTTGACCTGTTGTCATCAGTTCCAACGCTCAATGAAGATGGTGAGTTGTGGATGATTTGTAAATTCATCAATAGACATGAGTGTTGCATTGAT
ATTGTAAAGAATGATCATAGACAAGCCACAACTTGGATTGTTGGTGAGTGTGTCAAAGCACTATTAAGGGTGAACAACAGGATTCAGTGCCGCCCTCGTGATGTAATTGA
CTACATGAGAAGAAAGAATGGGGTTAACATCAACTACGATAAAGCGCGGAGGGGCCTTGAACTTGCACTTATTTCTATTCGGAGATCTCCAGATGTCTCTTACAGTCTCA
TCCCAGCATTCTCTGCTGCAATAATTGAGAAGAATCCAAGTACATATATAGCGTATGACGTCAACAATGTGTTGGGTTTTATGCCCTAA
Protein sequenceShow/hide protein sequence
MYRNVVNKSNIIRITDDRDVIWFMSNSSDYVSSGICVVVDHCETNASSTNTVSHQSVNHNLILQHGSSRNGGGIIDHVDVDLLSSVPTLNEDGELWMICKFINRHECCID
IVKNDHRQATTWIVGECVKALLRVNNRIQCRPRDVIDYMRRKNGVNINYDKARRGLELALISIRRSPDVSYSLIPAFSAAIIEKNPSTYIAYDVNNVLGFMP